RNA–Protein interactions for RNA: ENST00000589843.1

AP001029.1-201, humanhuman

TSL 3 BASIC

Gene AP001029.1, Length 168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001029.1-201ENST00000589843 CEBPAP49715 358 aaPredicted RBP22.17■■□□□ 1.14
AP001029.1-201ENST00000589843 STRCQ7RTU9 1775 aa22.17■■□□□ 1.14
AP001029.1-201ENST00000589843 SPATA31D1Q6ZQQ2 1576 aa22.16■■□□□ 1.14
AP001029.1-201ENST00000589843 PLEKHD1A6NEE1 506 aa22.16■■□□□ 1.14
AP001029.1-201ENST00000589843 ARHGEF12Q9NZN5 1544 aa22.13■■□□□ 1.13
AP001029.1-201ENST00000589843 MAGI2Q86UL8 1455 aa22.11■■□□□ 1.13
AP001029.1-201ENST00000589843 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
AP001029.1-201ENST00000589843 CDK13Q14004 1512 aaKnown RBP22.1■■□□□ 1.13
AP001029.1-201ENST00000589843 C9orf84Q5VXU9 1444 aa22.06■■□□□ 1.12
AP001029.1-201ENST00000589843 ATP10AO60312 1499 aa22.05■■□□□ 1.12
AP001029.1-201ENST00000589843 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
AP001029.1-201ENST00000589843 UHRF1BP1Q6BDS2 1440 aa22.03■■□□□ 1.12
AP001029.1-201ENST00000589843 PLCH2O75038 1416 aa22.01■■□□□ 1.11
AP001029.1-201ENST00000589843 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
AP001029.1-201ENST00000589843 MYO5CQ9NQX4 1742 aa21.97■■□□□ 1.11
AP001029.1-201ENST00000589843 C3P01024 1663 aa21.96■■□□□ 1.11
AP001029.1-201ENST00000589843 LTBP4Q8N2S1 1624 aa21.95■■□□□ 1.1
AP001029.1-201ENST00000589843 KIF14Q15058 1648 aa21.94■■□□□ 1.1
AP001029.1-201ENST00000589843 PTPRTO14522 1441 aa21.93■■□□□ 1.1
AP001029.1-201ENST00000589843 MYT1LQ9UL68 1186 aa21.93■■□□□ 1.1
AP001029.1-201ENST00000589843 DIP2CQ9Y2E4 1556 aa21.93■■□□□ 1.1
AP001029.1-201ENST00000589843 SETD1BQ9UPS6 1966 aaKnown RBP21.92■■□□□ 1.1
AP001029.1-201ENST00000589843 AFAP1Q8N556 730 aa21.91■■□□□ 1.1
AP001029.1-201ENST00000589843 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
AP001029.1-201ENST00000589843 EFCAB2Q5VUJ9 269 aa21.9■■□□□ 1.1
AP001029.1-201ENST00000589843 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
AP001029.1-201ENST00000589843 KDM5CP41229 1560 aa21.9■■□□□ 1.1
AP001029.1-201ENST00000589843 ZNF518AQ6AHZ1 1483 aa21.9■■□□□ 1.1
AP001029.1-201ENST00000589843 ARHGAP5Q13017 1502 aa21.88■■□□□ 1.09
AP001029.1-201ENST00000589843 NCOA1Q15788 1441 aa21.84■■□□□ 1.09
AP001029.1-201ENST00000589843 EHMT2Q96KQ7 1210 aa21.83■■□□□ 1.09
AP001029.1-201ENST00000589843 REREQ9P2R6 1566 aa21.82■■□□□ 1.08
AP001029.1-201ENST00000589843 IQSEC2Q5JU85 1478 aa21.81■■□□□ 1.08
AP001029.1-201ENST00000589843 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
AP001029.1-201ENST00000589843 TRAPPC8Q9Y2L5 1435 aa21.8■■□□□ 1.08
AP001029.1-201ENST00000589843 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
AP001029.1-201ENST00000589843 CDC42BPBQ9Y5S2 1711 aa21.79■■□□□ 1.08
AP001029.1-201ENST00000589843 ZNF335Q9H4Z2 1342 aaPredicted RBP21.78■■□□□ 1.08
AP001029.1-201ENST00000589843 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
AP001029.1-201ENST00000589843 UBAP1LF5GYI3 381 aa21.76■■□□□ 1.07
AP001029.1-201ENST00000589843 NCKAP5LQ9HCH0 1330 aa21.76■■□□□ 1.07
AP001029.1-201ENST00000589843 AGLP35573 1532 aa21.75■■□□□ 1.07
AP001029.1-201ENST00000589843 TROQ12816 1431 aaPredicted RBP21.75■■□□□ 1.07
AP001029.1-201ENST00000589843 EEA1Q15075 1411 aa21.75■■□□□ 1.07
AP001029.1-201ENST00000589843 MLH3Q9UHC1 1453 aa21.75■■□□□ 1.07
AP001029.1-201ENST00000589843 ITSN2Q9NZM3 1697 aa21.74■■□□□ 1.07
AP001029.1-201ENST00000589843 ABCC1P33527 1531 aa21.73■■□□□ 1.07
AP001029.1-201ENST00000589843 KIDINS220Q9ULH0 1771 aa21.73■■□□□ 1.07
AP001029.1-201ENST00000589843 CDK11AQ9UQ88 783 aaPredicted RBP21.71■■□□□ 1.07
AP001029.1-201ENST00000589843 FMN1Q68DA7 1419 aa21.71■■□□□ 1.07
AP001029.1-201ENST00000589843 PREX2Q70Z35 1606 aa21.7■■□□□ 1.06
AP001029.1-201ENST00000589843 CLIP1P30622 1438 aa21.7■■□□□ 1.06
AP001029.1-201ENST00000589843 ARHGAP35Q9NRY4 1499 aa21.7■■□□□ 1.06
AP001029.1-201ENST00000589843 CNTLNQ9NXG0 1405 aa21.68■■□□□ 1.06
AP001029.1-201ENST00000589843 SUPT6HQ7KZ85 1726 aaKnown RBP21.67■■□□□ 1.06
AP001029.1-201ENST00000589843 MROH2AA6NES4 1674 aa21.66■■□□□ 1.06
AP001029.1-201ENST00000589843 MYO3AQ8NEV4 1616 aa21.66■■□□□ 1.06
AP001029.1-201ENST00000589843 CLTCQ00610 1675 aaKnown RBP21.64■■□□□ 1.05
AP001029.1-201ENST00000589843 MED1Q15648 1581 aaPredicted RBP21.64■■□□□ 1.05
AP001029.1-201ENST00000589843 NPATQ14207 1427 aa21.63■■□□□ 1.05
AP001029.1-201ENST00000589843 ZMYM3Q14202 1370 aa21.63■■□□□ 1.05
AP001029.1-201ENST00000589843 SCAF1Q9H7N4 1312 aaKnown RBP21.63■■□□□ 1.05
AP001029.1-201ENST00000589843 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
AP001029.1-201ENST00000589843 ZNF142P52746 1687 aaPredicted RBP21.62■■□□□ 1.05
AP001029.1-201ENST00000589843 CDC42BPAQ5VT25 1732 aa21.61■■□□□ 1.05
AP001029.1-201ENST00000589843 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
AP001029.1-201ENST00000589843 CEP170BQ9Y4F5 1589 aaPredicted RBP21.6■■□□□ 1.05
AP001029.1-201ENST00000589843 HSPA1LP34931 641 aa21.59■■□□□ 1.05
AP001029.1-201ENST00000589843 PIP4K2BP78356 416 aa21.59■■□□□ 1.05
AP001029.1-201ENST00000589843 PLA2R1Q13018 1463 aa21.58■■□□□ 1.04
AP001029.1-201ENST00000589843 ZNF777Q9ULD5 760 aaPredicted RBP21.57■■□□□ 1.04
AP001029.1-201ENST00000589843 TCOF1Q13428 1488 aaKnown RBP21.57■■□□□ 1.04
AP001029.1-201ENST00000589843 SYCP2Q9BX26 1530 aa21.56■■□□□ 1.04
AP001029.1-201ENST00000589843 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
AP001029.1-201ENST00000589843 PTPRKQ15262 1439 aa21.55■■□□□ 1.04
AP001029.1-201ENST00000589843 PKD2Q13563 968 aa21.54■■□□□ 1.04
AP001029.1-201ENST00000589843 SPAG9O60271 1321 aaKnown RBP21.51■■□□□ 1.03
AP001029.1-201ENST00000589843 ATP7AQ04656 1500 aa21.5■■□□□ 1.03
AP001029.1-201ENST00000589843 PLXNC1O60486 1568 aa21.5■■□□□ 1.03
AP001029.1-201ENST00000589843 HNRNPMP52272 730 aaKnown RBP eCLIP21.5■■□□□ 1.03
AP001029.1-201ENST00000589843 GGT6Q6P531 493 aa21.5■■□□□ 1.03
AP001029.1-201ENST00000589843 A2MP01023 1474 aa21.47■■□□□ 1.03
AP001029.1-201ENST00000589843 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
AP001029.1-201ENST00000589843 INO80Q9ULG1 1556 aaPredicted RBP21.47■■□□□ 1.03
AP001029.1-201ENST00000589843 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
AP001029.1-201ENST00000589843 CCDC18Q5T9S5 1454 aa21.46■■□□□ 1.03
AP001029.1-201ENST00000589843 POLR1AO95602 1720 aaPredicted RBP21.46■■□□□ 1.03
AP001029.1-201ENST00000589843 NEURL4Q96JN8 1562 aa21.44■■□□□ 1.02
AP001029.1-201ENST00000589843 PHF23Q9BUL5 403 aaPredicted RBP21.44■■□□□ 1.02
AP001029.1-201ENST00000589843 CASKIN1Q8WXD9 1431 aa21.43■■□□□ 1.02
AP001029.1-201ENST00000589843 A2ML1A8K2U0 1454 aa21.43■■□□□ 1.02
AP001029.1-201ENST00000589843 GPATCH8Q9UKJ3 1502 aaKnown RBP21.43■■□□□ 1.02
AP001029.1-201ENST00000589843 TOM1O60784 492 aa21.42■■□□□ 1.02
AP001029.1-201ENST00000589843 CPS1P31327 1500 aa21.41■■□□□ 1.02
AP001029.1-201ENST00000589843 ALKQ9UM73 1620 aa21.4■■□□□ 1.02
AP001029.1-201ENST00000589843 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
AP001029.1-201ENST00000589843 FBXO31Q5XUX0 539 aaPredicted RBP21.36■■□□□ 1.01
AP001029.1-201ENST00000589843 ADGBQ8N7X0 1667 aa21.36■■□□□ 1.01
AP001029.1-201ENST00000589843 VWDEQ8N2E2 1590 aa21.36■■□□□ 1.01
AP001029.1-201ENST00000589843 CFDP1Q9UEE9 299 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms