RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 KDM6BO15054 1643 aa27.3■■□□□ 1.96
PRKCSH-209ENST00000589838 ABCA8O94911 1581 aa27.29■■□□□ 1.96
PRKCSH-209ENST00000589838 CFDP1Q9UEE9 299 aaPredicted RBP27.25■■□□□ 1.95
PRKCSH-209ENST00000589838 MPHOSPH9Q99550 1183 aa27.25■■□□□ 1.95
PRKCSH-209ENST00000589838 GPATCH8Q9UKJ3 1502 aaKnown RBP27.24■■□□□ 1.95
PRKCSH-209ENST00000589838 CAMSAP2Q08AD1 1489 aa27.24■■□□□ 1.95
PRKCSH-209ENST00000589838 KIF14Q15058 1648 aa27.22■■□□□ 1.95
PRKCSH-209ENST00000589838 ZNF644Q9H582 1327 aaPredicted RBP27.22■■□□□ 1.95
PRKCSH-209ENST00000589838 PLEKHD1A6NEE1 506 aa27.22■■□□□ 1.95
PRKCSH-209ENST00000589838 ADGBQ8N7X0 1667 aa27.22■■□□□ 1.95
PRKCSH-209ENST00000589838 DENND4BO75064 1496 aaPredicted RBP27.22■■□□□ 1.95
PRKCSH-209ENST00000589838 DDX10Q13206 875 aaKnown RBP27.17■■□□□ 1.94
PRKCSH-209ENST00000589838 KDM5BQ9UGL1 1544 aa27.17■■□□□ 1.94
PRKCSH-209ENST00000589838 ATP10BO94823 1461 aa27.17■■□□□ 1.94
PRKCSH-209ENST00000589838 CROCC2H7BZ55 1655 aa27.15■■□□□ 1.94
PRKCSH-209ENST00000589838 ADGRL2O95490 1459 aa27.14■■□□□ 1.93
PRKCSH-209ENST00000589838 CHD1O14646 1710 aa27.13■■□□□ 1.93
PRKCSH-209ENST00000589838 PTPRGP23470 1445 aa27.13■■□□□ 1.93
PRKCSH-209ENST00000589838 CDC42BPAQ5VT25 1732 aa27.12■■□□□ 1.93
PRKCSH-209ENST00000589838 NCOA1Q15788 1441 aa27.11■■□□□ 1.93
PRKCSH-209ENST00000589838 ABCC10Q5T3U5 1492 aa27.1■■□□□ 1.93
PRKCSH-209ENST00000589838 ZNF777Q9ULD5 760 aaPredicted RBP27.08■■□□□ 1.93
PRKCSH-209ENST00000589838 ANKRD30AQ9BXX3 1397 aa27.08■■□□□ 1.93
PRKCSH-209ENST00000589838 ANKRD30BQ9BXX2 1392 aa27.08■■□□□ 1.92
PRKCSH-209ENST00000589838 HIRIP3Q9BW71 556 aaPredicted RBP27.05■■□□□ 1.92
PRKCSH-209ENST00000589838 SLC4A1APQ9BWU0 796 aaKnown RBP27.05■■□□□ 1.92
PRKCSH-209ENST00000589838 SHROOM2Q13796 1616 aa27.04■■□□□ 1.92
PRKCSH-209ENST00000589838 RPRD2Q5VT52 1461 aaKnown RBP27.04■■□□□ 1.92
PRKCSH-209ENST00000589838 SHANK2Q9UPX8 1470 aa27.04■■□□□ 1.92
PRKCSH-209ENST00000589838 ANP32CO43423 234 aa27■■□□□ 1.91
PRKCSH-209ENST00000589838 PELP1Q8IZL8 1130 aaKnown RBP27■■□□□ 1.91
PRKCSH-209ENST00000589838 CCER2I3L3R5 266 aa26.99■■□□□ 1.91
PRKCSH-209ENST00000589838 L3MBTL2Q969R5 705 aa26.99■■□□□ 1.91
PRKCSH-209ENST00000589838 PZPP20742 1482 aa26.98■■□□□ 1.91
PRKCSH-209ENST00000589838 FOXD1Q16676 465 aa26.98■■□□□ 1.91
PRKCSH-209ENST00000589838 ARHGEF5Q12774 1597 aa26.96■■□□□ 1.91
PRKCSH-209ENST00000589838 EIF4G2P78344 907 aaKnown RBP eCLIP26.95■■□□□ 1.9
PRKCSH-209ENST00000589838 TSPY4P0CV99 314 aa26.94■■□□□ 1.9
PRKCSH-209ENST00000589838 TSPY10P0CW01 314 aa26.94■■□□□ 1.9
PRKCSH-209ENST00000589838 C9orf84Q5VXU9 1444 aa26.93■■□□□ 1.9
PRKCSH-209ENST00000589838 ANKRD50Q9ULJ7 1429 aa26.93■■□□□ 1.9
PRKCSH-209ENST00000589838 KIAA1107Q9UPP5 1409 aa26.92■■□□□ 1.9
PRKCSH-209ENST00000589838 HSPA5P11021 654 aaKnown RBP26.91■■□□□ 1.9
PRKCSH-209ENST00000589838 TEX14Q8IWB6 1497 aa26.91■■□□□ 1.9
PRKCSH-209ENST00000589838 PREX2Q70Z35 1606 aa26.9■■□□□ 1.9
PRKCSH-209ENST00000589838 RSPH4AQ5TD94 716 aa26.9■■□□□ 1.9
PRKCSH-209ENST00000589838 CDC42BPBQ9Y5S2 1711 aa26.87■■□□□ 1.89
PRKCSH-209ENST00000589838 KCNH8Q96L42 1107 aa26.87■■□□□ 1.89
PRKCSH-209ENST00000589838 ABCC2Q92887 1545 aa26.85■■□□□ 1.89
PRKCSH-209ENST00000589838 KDM5DQ9BY66 1539 aa26.83■■□□□ 1.89
PRKCSH-209ENST00000589838 CCDC141Q6ZP82 1450 aa26.83■■□□□ 1.89
PRKCSH-209ENST00000589838 MBD5Q9P267 1494 aa26.83■■□□□ 1.89
PRKCSH-209ENST00000589838 SAMD9LQ8IVG5 1584 aa26.82■■□□□ 1.88
PRKCSH-209ENST00000589838 PKD2Q13563 968 aa26.81■■□□□ 1.88
PRKCSH-209ENST00000589838 HNRNPMP52272 730 aaKnown RBP eCLIP26.8■■□□□ 1.88
PRKCSH-209ENST00000589838 NUP155O75694 1391 aa26.79■■□□□ 1.88
PRKCSH-209ENST00000589838 KIF15Q9NS87 1388 aa26.79■■□□□ 1.88
PRKCSH-209ENST00000589838 WASHC2AQ641Q2 1341 aa26.78■■□□□ 1.88
PRKCSH-209ENST00000589838 NBPF8Q3BBV2 869 aa26.78■■□□□ 1.88
PRKCSH-209ENST00000589838 CLASP1Q7Z460 1538 aa26.76■■□□□ 1.87
PRKCSH-209ENST00000589838 MYO5CQ9NQX4 1742 aa26.75■■□□□ 1.87
PRKCSH-209ENST00000589838 ERCC6L2Q5T890 1561 aa26.75■■□□□ 1.87
PRKCSH-209ENST00000589838 PLEKHH2Q8IVE3 1493 aa26.74■■□□□ 1.87
PRKCSH-209ENST00000589838 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.74■■□□□ 1.872e-23■□□□□ 8.5
PRKCSH-209ENST00000589838 ARHGAP5Q13017 1502 aa26.74■■□□□ 1.87
PRKCSH-209ENST00000589838 MAST1Q9Y2H9 1570 aa26.74■■□□□ 1.87
PRKCSH-209ENST00000589838 TTC37Q6PGP7 1564 aa26.73■■□□□ 1.87
PRKCSH-209ENST00000589838 POLR1AO95602 1720 aaPredicted RBP26.72■■□□□ 1.87
PRKCSH-209ENST00000589838 UHRF1BP1LA0JNW5 1464 aa26.72■■□□□ 1.87
PRKCSH-209ENST00000589838 CNTLNQ9NXG0 1405 aa26.7■■□□□ 1.86
PRKCSH-209ENST00000589838 SPATA31E1Q6ZUB1 1445 aa26.69■■□□□ 1.86
PRKCSH-209ENST00000589838 CCDC7Q96M83 1385 aa26.69■■□□□ 1.86
PRKCSH-209ENST00000589838 SYCP2Q9BX26 1530 aa26.67■■□□□ 1.86
PRKCSH-209ENST00000589838 ZCCHC11Q5TAX3 1644 aaKnown RBP26.65■■□□□ 1.86
PRKCSH-209ENST00000589838 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
PRKCSH-209ENST00000589838 UHRF1BP1Q6BDS2 1440 aa26.62■■□□□ 1.85
PRKCSH-209ENST00000589838 PLXNC1O60486 1568 aa26.62■■□□□ 1.85
PRKCSH-209ENST00000589838 SUPT16HQ9Y5B9 1047 aaKnown RBP26.61■■□□□ 1.85
PRKCSH-209ENST00000589838 FAM135AQ9P2D6 1515 aa26.6■■□□□ 1.85
PRKCSH-209ENST00000589838 PLCH2O75038 1416 aa26.59■■□□□ 1.85
PRKCSH-209ENST00000589838 UNC13BO14795 1591 aa26.59■■□□□ 1.85
PRKCSH-209ENST00000589838 C11orf95C9JLR9 678 aaPredicted RBP26.58■■□□□ 1.85
PRKCSH-209ENST00000589838 EFCAB2Q5VUJ9 269 aa26.56■■□□□ 1.84
PRKCSH-209ENST00000589838 RALGAPBQ86X10 1494 aa26.54■■□□□ 1.84
PRKCSH-209ENST00000589838 KIF7Q2M1P5 1343 aa26.54■■□□□ 1.84
PRKCSH-209ENST00000589838 ARID4BQ4LE39 1312 aaPredicted RBP26.54■■□□□ 1.84
PRKCSH-209ENST00000589838 DUOX2Q9NRD8 1548 aa26.54■■□□□ 1.84
PRKCSH-209ENST00000589838 USP47Q96K76 1375 aa26.53■■□□□ 1.84
PRKCSH-209ENST00000589838 ZNF326Q5BKZ1 582 aaKnown RBP26.51■■□□□ 1.83
PRKCSH-209ENST00000589838 KDM5CP41229 1560 aa26.51■■□□□ 1.83
PRKCSH-209ENST00000589838 IQGAP3Q86VI3 1631 aa26.49■■□□□ 1.83
PRKCSH-209ENST00000589838 ARAP3Q8WWN8 1544 aa26.49■■□□□ 1.83
PRKCSH-209ENST00000589838 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
PRKCSH-209ENST00000589838 PRKRIP1Q9H875 184 aaPredicted RBP26.47■■□□□ 1.83
PRKCSH-209ENST00000589838 ABCC1P33527 1531 aa26.47■■□□□ 1.83
PRKCSH-209ENST00000589838 CCDC144AA2RUR9 1427 aa26.45■■□□□ 1.83
PRKCSH-209ENST00000589838 CARD11Q9BXL7 1154 aa26.42■■□□□ 1.82
PRKCSH-209ENST00000589838 BCORL1Q5H9F3 1711 aa26.42■■□□□ 1.82
PRKCSH-209ENST00000589838 DCAF11Q8TEB1 546 aa26.42■■□□□ 1.82
PRKCSH-209ENST00000589838 MAGI2Q86UL8 1455 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 422 ms