RNA–Protein interactions for RNA: ENST00000589049.5

TPGS2-209, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 1 (best) BASIC

Gene TPGS2, Length 1,102 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-209ENST00000589049 C9orf84Q5VXU9 1444 aa23.09■■□□□ 1.29
TPGS2-209ENST00000589049 SCAPERQ9BY12 1400 aa23.09■■□□□ 1.29
TPGS2-209ENST00000589049 ATP10AO60312 1499 aa23.09■■□□□ 1.29
TPGS2-209ENST00000589049 PLCH2O75038 1416 aa23.08■■□□□ 1.29
TPGS2-209ENST00000589049 EEA1Q15075 1411 aa23.08■■□□□ 1.29
TPGS2-209ENST00000589049 RANGAP1P46060 587 aaPredicted RBP23.08■■□□□ 1.29
TPGS2-209ENST00000589049 DMRT2Q9Y5R5 561 aa23.07■■□□□ 1.28
TPGS2-209ENST00000589049 DISP3Q9P2K9 1392 aa23.05■■□□□ 1.28
TPGS2-209ENST00000589049 CDK13Q14004 1512 aaKnown RBP23.03■■□□□ 1.28
TPGS2-209ENST00000589049 UHRF1BP1Q6BDS2 1440 aa23.01■■□□□ 1.27
TPGS2-209ENST00000589049 MYO5CQ9NQX4 1742 aa23■■□□□ 1.27
TPGS2-209ENST00000589049 SOCS7O14512 581 aa23■■□□□ 1.27
TPGS2-209ENST00000589049 STRCQ7RTU9 1775 aa22.99■■□□□ 1.27
TPGS2-209ENST00000589049 EFCAB2Q5VUJ9 269 aa22.99■■□□□ 1.27
TPGS2-209ENST00000589049 ZNF518AQ6AHZ1 1483 aa22.98■■□□□ 1.27
TPGS2-209ENST00000589049 ILDR2Q71H61 639 aa22.96■■□□□ 1.27
TPGS2-209ENST00000589049 CEBPAP49715 358 aaPredicted RBP22.95■■□□□ 1.26
TPGS2-209ENST00000589049 KDM5CP41229 1560 aa22.94■■□□□ 1.26
TPGS2-209ENST00000589049 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
TPGS2-209ENST00000589049 SETD1BQ9UPS6 1966 aaKnown RBP22.93■■□□□ 1.26
TPGS2-209ENST00000589049 REREQ9P2R6 1566 aa22.93■■□□□ 1.26
TPGS2-209ENST00000589049 PTPRTO14522 1441 aa22.92■■□□□ 1.26
TPGS2-209ENST00000589049 CDK11AQ9UQ88 783 aaPredicted RBP22.92■■□□□ 1.26
TPGS2-209ENST00000589049 KIF14Q15058 1648 aa22.92■■□□□ 1.26
TPGS2-209ENST00000589049 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
TPGS2-209ENST00000589049 ARHGAP5Q13017 1502 aa22.89■■□□□ 1.26
TPGS2-209ENST00000589049 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.25
TPGS2-209ENST00000589049 IQSEC2Q5JU85 1478 aa22.87■■□□□ 1.25
TPGS2-209ENST00000589049 C3P01024 1663 aa22.87■■□□□ 1.25
TPGS2-209ENST00000589049 MYT1LQ9UL68 1186 aa22.85■■□□□ 1.25
TPGS2-209ENST00000589049 CLIP1P30622 1438 aa22.84■■□□□ 1.25
TPGS2-209ENST00000589049 TROQ12816 1431 aaPredicted RBP22.84■■□□□ 1.25
TPGS2-209ENST00000589049 AFAP1Q8N556 730 aa22.84■■□□□ 1.25
TPGS2-209ENST00000589049 MLH3Q9UHC1 1453 aa22.84■■□□□ 1.25
TPGS2-209ENST00000589049 AGLP35573 1532 aa22.83■■□□□ 1.25
TPGS2-209ENST00000589049 ESF1Q9H501 851 aaKnown RBP22.83■■□□□ 1.25
TPGS2-209ENST00000589049 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.25
TPGS2-209ENST00000589049 ABCA6Q8N139 1617 aa22.82■■□□□ 1.24
TPGS2-209ENST00000589049 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
TPGS2-209ENST00000589049 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
TPGS2-209ENST00000589049 CNTLNQ9NXG0 1405 aa22.79■■□□□ 1.24
TPGS2-209ENST00000589049 NCOA1Q15788 1441 aa22.78■■□□□ 1.24
TPGS2-209ENST00000589049 ABCC1P33527 1531 aa22.76■■□□□ 1.23
TPGS2-209ENST00000589049 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
TPGS2-209ENST00000589049 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
TPGS2-209ENST00000589049 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
TPGS2-209ENST00000589049 ITSN2Q9NZM3 1697 aa22.72■■□□□ 1.23
TPGS2-209ENST00000589049 NPATQ14207 1427 aa22.72■■□□□ 1.23
TPGS2-209ENST00000589049 UBTFP17480 764 aaKnown RBP22.7■■□□□ 1.22
TPGS2-209ENST00000589049 MROH2AA6NES4 1674 aa22.7■■□□□ 1.22
TPGS2-209ENST00000589049 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
TPGS2-209ENST00000589049 KIDINS220Q9ULH0 1771 aa22.68■■□□□ 1.22
TPGS2-209ENST00000589049 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
TPGS2-209ENST00000589049 CCDC18Q5T9S5 1454 aa22.65■■□□□ 1.22
TPGS2-209ENST00000589049 ZNF142P52746 1687 aaPredicted RBP22.61■■□□□ 1.21
TPGS2-209ENST00000589049 PLA2R1Q13018 1463 aa22.6■■□□□ 1.21
TPGS2-209ENST00000589049 SAMD9LQ8IVG5 1584 aa22.6■■□□□ 1.21
TPGS2-209ENST00000589049 ZMYM3Q14202 1370 aa22.6■■□□□ 1.21
TPGS2-209ENST00000589049 CDC42BPAQ5VT25 1732 aa22.6■■□□□ 1.21
TPGS2-209ENST00000589049 UBAP1LF5GYI3 381 aa22.59■■□□□ 1.21
TPGS2-209ENST00000589049 MYO3AQ8NEV4 1616 aa22.58■■□□□ 1.21
TPGS2-209ENST00000589049 PKD2Q13563 968 aa22.58■■□□□ 1.21
TPGS2-209ENST00000589049 ZNF335Q9H4Z2 1342 aaPredicted RBP22.57■■□□□ 1.2
TPGS2-209ENST00000589049 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
TPGS2-209ENST00000589049 CASKIN1Q8WXD9 1431 aa22.57■■□□□ 1.2
TPGS2-209ENST00000589049 NCKAP5LQ9HCH0 1330 aa22.56■■□□□ 1.2
TPGS2-209ENST00000589049 CEP170BQ9Y4F5 1589 aaPredicted RBP22.55■■□□□ 1.2
TPGS2-209ENST00000589049 TCOF1Q13428 1488 aaKnown RBP22.54■■□□□ 1.2
TPGS2-209ENST00000589049 SUPT6HQ7KZ85 1726 aaKnown RBP22.54■■□□□ 1.2
TPGS2-209ENST00000589049 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
TPGS2-209ENST00000589049 SYCP2Q9BX26 1530 aa22.53■■□□□ 1.2
TPGS2-209ENST00000589049 CLTCQ00610 1675 aaKnown RBP22.53■■□□□ 1.2
TPGS2-209ENST00000589049 PLXNC1O60486 1568 aa22.52■■□□□ 1.2
TPGS2-209ENST00000589049 ATP7AQ04656 1500 aa22.52■■□□□ 1.19
TPGS2-209ENST00000589049 PTPRKQ15262 1439 aa22.49■■□□□ 1.19
TPGS2-209ENST00000589049 PLEKHH2Q8IVE3 1493 aa22.49■■□□□ 1.19
TPGS2-209ENST00000589049 ZNF777Q9ULD5 760 aaPredicted RBP22.49■■□□□ 1.19
TPGS2-209ENST00000589049 INO80Q9ULG1 1556 aaPredicted RBP22.49■■□□□ 1.19
TPGS2-209ENST00000589049 A2MP01023 1474 aa22.48■■□□□ 1.19
TPGS2-209ENST00000589049 KIAA1107Q9UPP5 1409 aa22.48■■□□□ 1.19
TPGS2-209ENST00000589049 FYCO1Q9BQS8 1478 aa22.47■■□□□ 1.19
TPGS2-209ENST00000589049 PPP6R1Q9UPN7 881 aa22.47■■□□□ 1.19
TPGS2-209ENST00000589049 GPATCH8Q9UKJ3 1502 aaKnown RBP22.46■■□□□ 1.19
TPGS2-209ENST00000589049 HNRNPMP52272 730 aaKnown RBP eCLIP22.43■■□□□ 1.18
TPGS2-209ENST00000589049 A2ML1A8K2U0 1454 aa22.42■■□□□ 1.18
TPGS2-209ENST00000589049 MED1Q15648 1581 aaPredicted RBP22.42■■□□□ 1.18
TPGS2-209ENST00000589049 GGT6Q6P531 493 aa22.41■■□□□ 1.18
TPGS2-209ENST00000589049 ADGBQ8N7X0 1667 aa22.41■■□□□ 1.18
TPGS2-209ENST00000589049 CPS1P31327 1500 aa22.41■■□□□ 1.18
TPGS2-209ENST00000589049 DNMT1P26358 1616 aaKnown RBP22.39■■□□□ 1.18
TPGS2-209ENST00000589049 CFDP1Q9UEE9 299 aaPredicted RBP22.38■■□□□ 1.17
TPGS2-209ENST00000589049 POLR1AO95602 1720 aaPredicted RBP22.37■■□□□ 1.17
TPGS2-209ENST00000589049 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
TPGS2-209ENST00000589049 TOM1O60784 492 aa22.37■■□□□ 1.17
TPGS2-209ENST00000589049 HSPA1LP34931 641 aa22.36■■□□□ 1.17
TPGS2-209ENST00000589049 CCNB3Q8WWL7 1395 aa22.35■■□□□ 1.17
TPGS2-209ENST00000589049 PIP4K2BP78356 416 aa22.33■■□□□ 1.17
TPGS2-209ENST00000589049 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
TPGS2-209ENST00000589049 SHANK2Q9UPX8 1470 aa22.33■■□□□ 1.16
TPGS2-209ENST00000589049 NEURL4Q96JN8 1562 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms