RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
MBD1-217ENST00000588937 CENPBP07199 599 aaPredicted RBP21.99■■□□□ 1.11
MBD1-217ENST00000588937 KDM5BQ9UGL1 1544 aa21.96■■□□□ 1.11
MBD1-217ENST00000588937 ABCC5O15440 1437 aa21.96■■□□□ 1.11
MBD1-217ENST00000588937 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
MBD1-217ENST00000588937 MIER1Q8N108 512 aa21.96■■□□□ 1.11
MBD1-217ENST00000588937 KIF14Q15058 1648 aa21.96■■□□□ 1.11
MBD1-217ENST00000588937 GPATCH8Q9UKJ3 1502 aaKnown RBP21.96■■□□□ 1.11
MBD1-217ENST00000588937 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
MBD1-217ENST00000588937 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
MBD1-217ENST00000588937 CAMSAP2Q08AD1 1489 aa21.93■■□□□ 1.1
MBD1-217ENST00000588937 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
MBD1-217ENST00000588937 TRIM52Q96A61 297 aa21.9■■□□□ 1.1
MBD1-217ENST00000588937 KDM6BO15054 1643 aa21.9■■□□□ 1.1
MBD1-217ENST00000588937 ADGBQ8N7X0 1667 aa21.89■■□□□ 1.1
MBD1-217ENST00000588937 ZCCHC11Q5TAX3 1644 aaKnown RBP21.89■■□□□ 1.09
MBD1-217ENST00000588937 ZNF644Q9H582 1327 aaPredicted RBP21.88■■□□□ 1.09
MBD1-217ENST00000588937 CDC42BPAQ5VT25 1732 aa21.87■■□□□ 1.09
MBD1-217ENST00000588937 CROCC2H7BZ55 1655 aa21.87■■□□□ 1.09
MBD1-217ENST00000588937 ABCC10Q5T3U5 1492 aa21.86■■□□□ 1.09
MBD1-217ENST00000588937 ADGRL2O95490 1459 aa21.84■■□□□ 1.09
MBD1-217ENST00000588937 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.09
MBD1-217ENST00000588937 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.09
MBD1-217ENST00000588937 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.09
MBD1-217ENST00000588937 MPHOSPH9Q99550 1183 aa21.83■■□□□ 1.09
MBD1-217ENST00000588937 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
MBD1-217ENST00000588937 DENND4BO75064 1496 aaPredicted RBP21.81■■□□□ 1.08
MBD1-217ENST00000588937 ZNF777Q9ULD5 760 aaPredicted RBP21.8■■□□□ 1.08
MBD1-217ENST00000588937 NCOA1Q15788 1441 aa21.79■■□□□ 1.08
MBD1-217ENST00000588937 SHANK2Q9UPX8 1470 aa21.78■■□□□ 1.08
MBD1-217ENST00000588937 ANKRD30AQ9BXX3 1397 aa21.78■■□□□ 1.08
MBD1-217ENST00000588937 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
MBD1-217ENST00000588937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.73■■□□□ 1.07
MBD1-217ENST00000588937 ARHGEF5Q12774 1597 aa21.72■■□□□ 1.07
MBD1-217ENST00000588937 PREX2Q70Z35 1606 aa21.72■■□□□ 1.07
MBD1-217ENST00000588937 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
MBD1-217ENST00000588937 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
MBD1-217ENST00000588937 ANKRD30BQ9BXX2 1392 aa21.69■■□□□ 1.06
MBD1-217ENST00000588937 CDC42BPBQ9Y5S2 1711 aa21.69■■□□□ 1.06
MBD1-217ENST00000588937 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
MBD1-217ENST00000588937 C9orf84Q5VXU9 1444 aa21.69■■□□□ 1.06
MBD1-217ENST00000588937 TSPY4P0CV99 314 aa21.69■■□□□ 1.06
MBD1-217ENST00000588937 TSPY10P0CW01 314 aa21.69■■□□□ 1.06
MBD1-217ENST00000588937 TTC37Q6PGP7 1564 aa21.68■■□□□ 1.06
MBD1-217ENST00000588937 RSPH4AQ5TD94 716 aa21.68■■□□□ 1.06
MBD1-217ENST00000588937 MYO5CQ9NQX4 1742 aa21.67■■□□□ 1.06
MBD1-217ENST00000588937 RPRD2Q5VT52 1461 aaKnown RBP21.66■■□□□ 1.06
MBD1-217ENST00000588937 ANKRD50Q9ULJ7 1429 aa21.66■■□□□ 1.06
MBD1-217ENST00000588937 PZPP20742 1482 aa21.65■■□□□ 1.06
MBD1-217ENST00000588937 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
MBD1-217ENST00000588937 ASXL2Q76L83 1435 aa21.65■■□□□ 1.06
MBD1-217ENST00000588937 NPM1P06748 294 aaKnown RBP eCLIP21.64■■□□□ 1.06
MBD1-217ENST00000588937 SAMD9LQ8IVG5 1584 aa21.64■■□□□ 1.05
MBD1-217ENST00000588937 CCDC141Q6ZP82 1450 aa21.63■■□□□ 1.05
MBD1-217ENST00000588937 MBD5Q9P267 1494 aa21.63■■□□□ 1.05
MBD1-217ENST00000588937 ABCA9Q8IUA7 1624 aa21.63■■□□□ 1.05
MBD1-217ENST00000588937 PLCH2O75038 1416 aa21.62■■□□□ 1.05
MBD1-217ENST00000588937 FOXD1Q16676 465 aa21.61■■□□□ 1.05
MBD1-217ENST00000588937 DDX10Q13206 875 aaKnown RBP21.6■■□□□ 1.05
MBD1-217ENST00000588937 KIAA1107Q9UPP5 1409 aa21.59■■□□□ 1.05
MBD1-217ENST00000588937 ARHGAP5Q13017 1502 aa21.59■■□□□ 1.05
MBD1-217ENST00000588937 PLEKHH2Q8IVE3 1493 aa21.59■■□□□ 1.05
MBD1-217ENST00000588937 HNRNPMP52272 730 aaKnown RBP eCLIP21.59■■□□□ 1.05
MBD1-217ENST00000588937 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
MBD1-217ENST00000588937 L3MBTL2Q969R5 705 aa21.58■■□□□ 1.04
MBD1-217ENST00000588937 KCNH8Q96L42 1107 aa21.58■■□□□ 1.04
MBD1-217ENST00000588937 KDM5DQ9BY66 1539 aa21.57■■□□□ 1.04
MBD1-217ENST00000588937 KIF15Q9NS87 1388 aa21.57■■□□□ 1.04
MBD1-217ENST00000588937 MAST1Q9Y2H9 1570 aa21.56■■□□□ 1.04
MBD1-217ENST00000588937 TEX14Q8IWB6 1497 aa21.55■■□□□ 1.04
MBD1-217ENST00000588937 HIRIP3Q9BW71 556 aaPredicted RBP21.54■■□□□ 1.04
MBD1-217ENST00000588937 GTF3C3Q9Y5Q9 886 aa21.53■■□□□ 1.04
MBD1-217ENST00000588937 SYCP2Q9BX26 1530 aa21.52■■□□□ 1.04
MBD1-217ENST00000588937 NUP155O75694 1391 aa21.51■■□□□ 1.03
MBD1-217ENST00000588937 EIF4G2P78344 907 aaKnown RBP eCLIP21.51■■□□□ 1.03
MBD1-217ENST00000588937 PKD2Q13563 968 aa21.51■■□□□ 1.03
MBD1-217ENST00000588937 EFCAB2Q5VUJ9 269 aa21.5■■□□□ 1.03
MBD1-217ENST00000588937 PLXNC1O60486 1568 aa21.47■■□□□ 1.03
MBD1-217ENST00000588937 ANP32CO43423 234 aa21.46■■□□□ 1.03
MBD1-217ENST00000588937 HSPA5P11021 654 aaKnown RBP21.46■■□□□ 1.03
MBD1-217ENST00000588937 ABCC1P33527 1531 aa21.46■■□□□ 1.03
MBD1-217ENST00000588937 GLI2P10070 1586 aa21.45■■□□□ 1.02
MBD1-217ENST00000588937 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
MBD1-217ENST00000588937 ARHGEF12Q9NZN5 1544 aa21.42■■□□□ 1.02
MBD1-217ENST00000588937 FANCAO15360 1455 aa21.42■■□□□ 1.02
MBD1-217ENST00000588937 UNC13BO14795 1591 aa21.41■■□□□ 1.02
MBD1-217ENST00000588937 NBPF8Q3BBV2 869 aa21.41■■□□□ 1.02
MBD1-217ENST00000588937 CFAP74Q9C0B2 1584 aa21.4■■□□□ 1.02
MBD1-217ENST00000588937 CD109Q6YHK3 1445 aa21.4■■□□□ 1.02
MBD1-217ENST00000588937 DUOX2Q9NRD8 1548 aa21.39■■□□□ 1.02
MBD1-217ENST00000588937 FAM135AQ9P2D6 1515 aa21.39■■□□□ 1.02
MBD1-217ENST00000588937 MAP3K4Q9Y6R4 1608 aa21.38■■□□□ 1.01
MBD1-217ENST00000588937 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
MBD1-217ENST00000588937 ERBINQ96RT1 1412 aa21.35■■□□□ 1.01
MBD1-217ENST00000588937 DIP2BQ9P265 1576 aa21.35■■□□□ 1.01
MBD1-217ENST00000588937 POLR1AO95602 1720 aaPredicted RBP21.34■■□□□ 1.01
MBD1-217ENST00000588937 RTEL1-TNFRSF6BF6WH68 1400 aa21.33■■□□□ 1.01
MBD1-217ENST00000588937 UHRF1BP1Q6BDS2 1440 aa21.33■■□□□ 1.01
MBD1-217ENST00000588937 NEO1Q92859 1461 aa21.33■■□□□ 1
MBD1-217ENST00000588937 IQGAP3Q86VI3 1631 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms