RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 ITSN2Q9NZM3 1697 aa25.17■■□□□ 1.62
ERCC2-211ENST00000588652 ABCC5O15440 1437 aa25.17■■□□□ 1.62
ERCC2-211ENST00000588652 CHD1O14646 1710 aa25.16■■□□□ 1.62
ERCC2-211ENST00000588652 ROCK1Q13464 1354 aa25.16■■□□□ 1.62
ERCC2-211ENST00000588652 TONSLQ96HA7 1378 aa25.14■■□□□ 1.62
ERCC2-211ENST00000588652 GPATCH8Q9UKJ3 1502 aaKnown RBP25.13■■□□□ 1.61
ERCC2-211ENST00000588652 DENND4BO75064 1496 aaPredicted RBP25.12■■□□□ 1.61
ERCC2-211ENST00000588652 SLC24A1O60721 1099 aa25.12■■□□□ 1.61
ERCC2-211ENST00000588652 ATP10BO94823 1461 aa25.11■■□□□ 1.61
ERCC2-211ENST00000588652 CAMSAP2Q08AD1 1489 aa25.11■■□□□ 1.61
ERCC2-211ENST00000588652 CFDP1Q9UEE9 299 aaPredicted RBP25.1■■□□□ 1.61
ERCC2-211ENST00000588652 TRIM52Q96A61 297 aa25.1■■□□□ 1.61
ERCC2-211ENST00000588652 PLEKHD1A6NEE1 506 aa25.06■■□□□ 1.6
ERCC2-211ENST00000588652 PTPRGP23470 1445 aa25.06■■□□□ 1.6
ERCC2-211ENST00000588652 MPHOSPH9Q99550 1183 aa25.03■■□□□ 1.6
ERCC2-211ENST00000588652 CDC42BPAQ5VT25 1732 aa25.03■■□□□ 1.6
ERCC2-211ENST00000588652 SHROOM2Q13796 1616 aa25.02■■□□□ 1.6
ERCC2-211ENST00000588652 ABCC10Q5T3U5 1492 aa25.02■■□□□ 1.6
ERCC2-211ENST00000588652 KDM5BQ9UGL1 1544 aa25.01■■□□□ 1.59
ERCC2-211ENST00000588652 CROCC2H7BZ55 1655 aa25■■□□□ 1.59
ERCC2-211ENST00000588652 ADGBQ8N7X0 1667 aa25■■□□□ 1.59
ERCC2-211ENST00000588652 ZNF777Q9ULD5 760 aaPredicted RBP24.99■■□□□ 1.59
ERCC2-211ENST00000588652 NCOA1Q15788 1441 aa24.97■■□□□ 1.59
ERCC2-211ENST00000588652 ADGRL2O95490 1459 aa24.96■■□□□ 1.59
ERCC2-211ENST00000588652 HIRIP3Q9BW71 556 aaPredicted RBP24.91■■□□□ 1.58
ERCC2-211ENST00000588652 FOXD1Q16676 465 aa24.9■■□□□ 1.58
ERCC2-211ENST00000588652 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.58
ERCC2-211ENST00000588652 ANKRD30BQ9BXX2 1392 aa24.88■■□□□ 1.57
ERCC2-211ENST00000588652 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
ERCC2-211ENST00000588652 ANKRD30AQ9BXX3 1397 aa24.87■■□□□ 1.57
ERCC2-211ENST00000588652 SLC4A1APQ9BWU0 796 aaKnown RBP24.86■■□□□ 1.57
ERCC2-211ENST00000588652 SHANK2Q9UPX8 1470 aa24.86■■□□□ 1.57
ERCC2-211ENST00000588652 PZPP20742 1482 aa24.84■■□□□ 1.57
ERCC2-211ENST00000588652 KCNH8Q96L42 1107 aa24.84■■□□□ 1.57
ERCC2-211ENST00000588652 RPRD2Q5VT52 1461 aaKnown RBP24.84■■□□□ 1.57
ERCC2-211ENST00000588652 CDC42BPBQ9Y5S2 1711 aa24.82■■□□□ 1.56
ERCC2-211ENST00000588652 ABCC2Q92887 1545 aa24.81■■□□□ 1.56
ERCC2-211ENST00000588652 C9orf84Q5VXU9 1444 aa24.81■■□□□ 1.56
ERCC2-211ENST00000588652 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
ERCC2-211ENST00000588652 PREX2Q70Z35 1606 aa24.81■■□□□ 1.56
ERCC2-211ENST00000588652 ANKRD50Q9ULJ7 1429 aa24.8■■□□□ 1.56
ERCC2-211ENST00000588652 L3MBTL2Q969R5 705 aa24.8■■□□□ 1.56
ERCC2-211ENST00000588652 ARHGEF5Q12774 1597 aa24.8■■□□□ 1.56
ERCC2-211ENST00000588652 MBD5Q9P267 1494 aa24.77■■□□□ 1.56
ERCC2-211ENST00000588652 SAMD9LQ8IVG5 1584 aa24.77■■□□□ 1.56
ERCC2-211ENST00000588652 SUPT16HQ9Y5B9 1047 aaKnown RBP24.76■■□□□ 1.55
ERCC2-211ENST00000588652 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
ERCC2-211ENST00000588652 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
ERCC2-211ENST00000588652 TEX14Q8IWB6 1497 aa24.76■■□□□ 1.55
ERCC2-211ENST00000588652 HNRNPMP52272 730 aaKnown RBP eCLIP24.75■■□□□ 1.559e-6■■■■□ 22.2
ERCC2-211ENST00000588652 TTC37Q6PGP7 1564 aa24.74■■□□□ 1.55
ERCC2-211ENST00000588652 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.73■■□□□ 1.55
ERCC2-211ENST00000588652 KIAA1107Q9UPP5 1409 aa24.72■■□□□ 1.55
ERCC2-211ENST00000588652 CCDC141Q6ZP82 1450 aa24.71■■□□□ 1.55
ERCC2-211ENST00000588652 KIF15Q9NS87 1388 aa24.68■■□□□ 1.54
ERCC2-211ENST00000588652 HSPA5P11021 654 aaKnown RBP24.67■■□□□ 1.54
ERCC2-211ENST00000588652 RSPH4AQ5TD94 716 aa24.67■■□□□ 1.54
ERCC2-211ENST00000588652 ARHGAP5Q13017 1502 aa24.66■■□□□ 1.54
ERCC2-211ENST00000588652 PKD2Q13563 968 aa24.66■■□□□ 1.54
ERCC2-211ENST00000588652 MYO5CQ9NQX4 1742 aa24.66■■□□□ 1.54
ERCC2-211ENST00000588652 UHRF1BP1LA0JNW5 1464 aa24.66■■□□□ 1.54
ERCC2-211ENST00000588652 EIF4G2P78344 907 aaKnown RBP eCLIP24.65■■□□□ 1.54
ERCC2-211ENST00000588652 ZCCHC11Q5TAX3 1644 aaKnown RBP24.65■■□□□ 1.54
ERCC2-211ENST00000588652 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
ERCC2-211ENST00000588652 NUP155O75694 1391 aa24.64■■□□□ 1.54
ERCC2-211ENST00000588652 NBPF8Q3BBV2 869 aa24.64■■□□□ 1.54
ERCC2-211ENST00000588652 SYCP2Q9BX26 1530 aa24.64■■□□□ 1.54
ERCC2-211ENST00000588652 CCER2I3L3R5 266 aa24.62■■□□□ 1.53
ERCC2-211ENST00000588652 ANP32CO43423 234 aa24.62■■□□□ 1.53
ERCC2-211ENST00000588652 MAST1Q9Y2H9 1570 aa24.6■■□□□ 1.53
ERCC2-211ENST00000588652 WASHC2AQ641Q2 1341 aa24.58■■□□□ 1.53
ERCC2-211ENST00000588652 PLEKHH2Q8IVE3 1493 aa24.56■■□□□ 1.52
ERCC2-211ENST00000588652 PLCH2O75038 1416 aa24.53■■□□□ 1.52
ERCC2-211ENST00000588652 SPATA31E1Q6ZUB1 1445 aa24.51■■□□□ 1.51
ERCC2-211ENST00000588652 PLXNC1O60486 1568 aa24.51■■□□□ 1.51
ERCC2-211ENST00000588652 ARHGEF12Q9NZN5 1544 aa24.5■■□□□ 1.51
ERCC2-211ENST00000588652 FAM135AQ9P2D6 1515 aa24.5■■□□□ 1.51
ERCC2-211ENST00000588652 UNC13BO14795 1591 aa24.47■■□□□ 1.51
ERCC2-211ENST00000588652 C11orf95C9JLR9 678 aaPredicted RBP24.46■■□□□ 1.51
ERCC2-211ENST00000588652 EFCAB2Q5VUJ9 269 aa24.46■■□□□ 1.51
ERCC2-211ENST00000588652 CCDC7Q96M83 1385 aa24.45■■□□□ 1.5
ERCC2-211ENST00000588652 POLR1AO95602 1720 aaPredicted RBP24.45■■□□□ 1.5
ERCC2-211ENST00000588652 ABCC1P33527 1531 aa24.44■■□□□ 1.5
ERCC2-211ENST00000588652 CNTLNQ9NXG0 1405 aa24.42■■□□□ 1.5
ERCC2-211ENST00000588652 UHRF1BP1Q6BDS2 1440 aa24.42■■□□□ 1.5
ERCC2-211ENST00000588652 DUOX2Q9NRD8 1548 aa24.41■■□□□ 1.5
ERCC2-211ENST00000588652 ARAP3Q8WWN8 1544 aa24.4■■□□□ 1.5
ERCC2-211ENST00000588652 ZNF326Q5BKZ1 582 aaKnown RBP24.4■■□□□ 1.5
ERCC2-211ENST00000588652 WDR7Q9Y4E6 1490 aa24.38■■□□□ 1.49
ERCC2-211ENST00000588652 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
ERCC2-211ENST00000588652 TRAPPC8Q9Y2L5 1435 aa24.37■■□□□ 1.49
ERCC2-211ENST00000588652 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
ERCC2-211ENST00000588652 RALGAPBQ86X10 1494 aa24.36■■□□□ 1.49
ERCC2-211ENST00000588652 KIF7Q2M1P5 1343 aa24.36■■□□□ 1.49
ERCC2-211ENST00000588652 USP47Q96K76 1375 aa24.35■■□□□ 1.49
ERCC2-211ENST00000588652 KDM5CP41229 1560 aa24.35■■□□□ 1.49
ERCC2-211ENST00000588652 FKBP8Q14318 412 aa24.34■■□□□ 1.49
ERCC2-211ENST00000588652 MAGI2Q86UL8 1455 aa24.34■■□□□ 1.49
ERCC2-211ENST00000588652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.34■■□□□ 1.492e-6■■□□□ 14
ERCC2-211ENST00000588652 CCDC144AA2RUR9 1427 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms