RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 CERKQ8TCT0 537 aa18.6■□□□□ 0.57
CALR-206ENST00000588454 FER1L4A9Z1Z3 1794 aa18.57■□□□□ 0.56
CALR-206ENST00000588454 CDK13Q14004 1512 aaKnown RBP18.56■□□□□ 0.56
CALR-206ENST00000588454 ATP10AO60312 1499 aa18.56■□□□□ 0.56
CALR-206ENST00000588454 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
CALR-206ENST00000588454 ARHGEF12Q9NZN5 1544 aa18.54■□□□□ 0.56
CALR-206ENST00000588454 C9orf84Q5VXU9 1444 aa18.52■□□□□ 0.56
CALR-206ENST00000588454 CEBPAP49715 358 aaPredicted RBP18.5■□□□□ 0.55
CALR-206ENST00000588454 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
CALR-206ENST00000588454 CDK11AQ9UQ88 783 aaPredicted RBP18.5■□□□□ 0.55
CALR-206ENST00000588454 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
CALR-206ENST00000588454 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
CALR-206ENST00000588454 ATP1B4Q9UN42 357 aaPredicted RBP18.48■□□□□ 0.55
CALR-206ENST00000588454 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
CALR-206ENST00000588454 MYO5CQ9NQX4 1742 aa18.48■□□□□ 0.55
CALR-206ENST00000588454 FMN1Q68DA7 1419 aa18.48■□□□□ 0.55
CALR-206ENST00000588454 AFAP1Q8N556 730 aa18.46■□□□□ 0.55
CALR-206ENST00000588454 ZNF518AQ6AHZ1 1483 aa18.46■□□□□ 0.54
CALR-206ENST00000588454 STRCQ7RTU9 1775 aa18.44■□□□□ 0.54
CALR-206ENST00000588454 UBTFP17480 764 aaKnown RBP18.43■□□□□ 0.54
CALR-206ENST00000588454 KDM5CP41229 1560 aa18.42■□□□□ 0.54
CALR-206ENST00000588454 KIF14Q15058 1648 aa18.42■□□□□ 0.54
CALR-206ENST00000588454 TROQ12816 1431 aaPredicted RBP18.42■□□□□ 0.54
CALR-206ENST00000588454 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
CALR-206ENST00000588454 UHRF1BP1Q6BDS2 1440 aa18.4■□□□□ 0.54
CALR-206ENST00000588454 ARHGAP5Q13017 1502 aa18.4■□□□□ 0.54
CALR-206ENST00000588454 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
CALR-206ENST00000588454 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
CALR-206ENST00000588454 MLH3Q9UHC1 1453 aa18.38■□□□□ 0.53
CALR-206ENST00000588454 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
CALR-206ENST00000588454 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
CALR-206ENST00000588454 CLIP1P30622 1438 aa18.37■□□□□ 0.53
CALR-206ENST00000588454 PTPRTO14522 1441 aa18.35■□□□□ 0.53
CALR-206ENST00000588454 CDC42BPBQ9Y5S2 1711 aa18.35■□□□□ 0.53
CALR-206ENST00000588454 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
CALR-206ENST00000588454 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
CALR-206ENST00000588454 AGLP35573 1532 aa18.33■□□□□ 0.53
CALR-206ENST00000588454 LRRIQ1Q96JM4 1722 aa18.33■□□□□ 0.52
CALR-206ENST00000588454 C3P01024 1663 aa18.33■□□□□ 0.52
CALR-206ENST00000588454 ABCA6Q8N139 1617 aa18.33■□□□□ 0.52
CALR-206ENST00000588454 ESF1Q9H501 851 aaKnown RBP18.32■□□□□ 0.52
CALR-206ENST00000588454 TRAPPC8Q9Y2L5 1435 aa18.32■□□□□ 0.52
CALR-206ENST00000588454 SOCS7O14512 581 aa18.29■□□□□ 0.52
CALR-206ENST00000588454 ABCC1P33527 1531 aa18.28■□□□□ 0.52
CALR-206ENST00000588454 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
CALR-206ENST00000588454 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
CALR-206ENST00000588454 KIDINS220Q9ULH0 1771 aa18.27■□□□□ 0.51
CALR-206ENST00000588454 LTBP4Q8N2S1 1624 aa18.27■□□□□ 0.51
CALR-206ENST00000588454 ITSN2Q9NZM3 1697 aa18.26■□□□□ 0.51
CALR-206ENST00000588454 NCOA1Q15788 1441 aa18.25■□□□□ 0.51
CALR-206ENST00000588454 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
CALR-206ENST00000588454 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
CALR-206ENST00000588454 CCDC18Q5T9S5 1454 aa18.24■□□□□ 0.51
CALR-206ENST00000588454 CDC42BPAQ5VT25 1732 aa18.22■□□□□ 0.51
CALR-206ENST00000588454 NPATQ14207 1427 aa18.22■□□□□ 0.51
CALR-206ENST00000588454 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
CALR-206ENST00000588454 SAMD9LQ8IVG5 1584 aa18.19■□□□□ 0.5
CALR-206ENST00000588454 MROH2AA6NES4 1674 aa18.18■□□□□ 0.5
CALR-206ENST00000588454 ZNF777Q9ULD5 760 aaPredicted RBP18.18■□□□□ 0.5
CALR-206ENST00000588454 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
CALR-206ENST00000588454 SPAG9O60271 1321 aaKnown RBP18.18■□□□□ 0.5
CALR-206ENST00000588454 SPATA31D1Q6ZQQ2 1576 aa18.17■□□□□ 0.5
CALR-206ENST00000588454 HNRNPMP52272 730 aaKnown RBP eCLIP18.16■□□□□ 0.5
CALR-206ENST00000588454 GPATCH8Q9UKJ3 1502 aaKnown RBP18.15■□□□□ 0.5
CALR-206ENST00000588454 NCKAP5LQ9HCH0 1330 aa18.15■□□□□ 0.5
CALR-206ENST00000588454 SUPT6HQ7KZ85 1726 aaKnown RBP18.13■□□□□ 0.49
CALR-206ENST00000588454 PKD2Q13563 968 aa18.13■□□□□ 0.49
CALR-206ENST00000588454 KIAA1107Q9UPP5 1409 aa18.13■□□□□ 0.49
CALR-206ENST00000588454 FYCO1Q9BQS8 1478 aa18.13■□□□□ 0.49
CALR-206ENST00000588454 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
CALR-206ENST00000588454 ZNF335Q9H4Z2 1342 aaPredicted RBP18.12■□□□□ 0.49
CALR-206ENST00000588454 ATP7AQ04656 1500 aa18.1■□□□□ 0.49
CALR-206ENST00000588454 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
CALR-206ENST00000588454 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
CALR-206ENST00000588454 CLTCQ00610 1675 aaKnown RBP18.09■□□□□ 0.49
CALR-206ENST00000588454 A2MP01023 1474 aa18.09■□□□□ 0.49
CALR-206ENST00000588454 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
CALR-206ENST00000588454 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
CALR-206ENST00000588454 UBAP1LF5GYI3 381 aa18.09■□□□□ 0.49
CALR-206ENST00000588454 CFDP1Q9UEE9 299 aaPredicted RBP18.09■□□□□ 0.49
CALR-206ENST00000588454 PLXNC1O60486 1568 aa18.08■□□□□ 0.49
CALR-206ENST00000588454 GGT6Q6P531 493 aa18.08■□□□□ 0.48
CALR-206ENST00000588454 ZNF142P52746 1687 aaPredicted RBP18.08■□□□□ 0.48
CALR-206ENST00000588454 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
CALR-206ENST00000588454 INO80Q9ULG1 1556 aaPredicted RBP18.07■□□□□ 0.48
CALR-206ENST00000588454 MYO3AQ8NEV4 1616 aa18.06■□□□□ 0.48
CALR-206ENST00000588454 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
CALR-206ENST00000588454 CEP170BQ9Y4F5 1589 aaPredicted RBP18.05■□□□□ 0.48
CALR-206ENST00000588454 ADGBQ8N7X0 1667 aa18■□□□□ 0.47
CALR-206ENST00000588454 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
CALR-206ENST00000588454 ZNF644Q9H582 1327 aaPredicted RBP17.99■□□□□ 0.47
CALR-206ENST00000588454 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
CALR-206ENST00000588454 MBD5Q9P267 1494 aa17.98■□□□□ 0.47
CALR-206ENST00000588454 DNMT1P26358 1616 aaKnown RBP17.98■□□□□ 0.47
CALR-206ENST00000588454 RTEL1-TNFRSF6BF6WH68 1400 aa17.98■□□□□ 0.47
CALR-206ENST00000588454 DHX29Q7Z478 1369 aaKnown RBP17.97■□□□□ 0.47
CALR-206ENST00000588454 FBXO31Q5XUX0 539 aaPredicted RBP17.94■□□□□ 0.46
CALR-206ENST00000588454 TIAM1Q13009 1591 aa17.93■□□□□ 0.46
CALR-206ENST00000588454 HSPA1LP34931 641 aa17.93■□□□□ 0.46
CALR-206ENST00000588454 TNRQ92752 1358 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms