RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 FGD6Q6ZV73 1430 aa18.32■□□□□ 0.52
CACNA1A-209ENST00000587525 RGS3P49796 1198 aa18.32■□□□□ 0.52
CACNA1A-209ENST00000587525 NUP155O75694 1391 aa18.3■□□□□ 0.52
CACNA1A-209ENST00000587525 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
CACNA1A-209ENST00000587525 BIVM-ERCC5R4GMW8 1640 aa18.3■□□□□ 0.52
CACNA1A-209ENST00000587525 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
CACNA1A-209ENST00000587525 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
CACNA1A-209ENST00000587525 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-209ENST00000587525 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
CACNA1A-209ENST00000587525 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.51
CACNA1A-209ENST00000587525 KIF7Q2M1P5 1343 aa18.26■□□□□ 0.51
CACNA1A-209ENST00000587525 NEFMP07197 916 aa18.25■□□□□ 0.51
CACNA1A-209ENST00000587525 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-209ENST00000587525 MRC2Q9UBG0 1479 aa18.23■□□□□ 0.51
CACNA1A-209ENST00000587525 SKAP1Q86WV1 359 aa18.22■□□□□ 0.51
CACNA1A-209ENST00000587525 PAK3O75914 559 aaPredicted RBP18.22■□□□□ 0.51
CACNA1A-209ENST00000587525 SAFB2Q14151 953 aaKnown RBP eCLIP18.21■□□□□ 0.51
CACNA1A-209ENST00000587525 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
CACNA1A-209ENST00000587525 SLC4A3P48751 1232 aa18.2■□□□□ 0.5
CACNA1A-209ENST00000587525 EXOC6Q8TAG9 804 aa18.19■□□□□ 0.5
CACNA1A-209ENST00000587525 NCOA2Q15596 1464 aa18.19■□□□□ 0.5
CACNA1A-209ENST00000587525 PRKCSHP14314 528 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-209ENST00000587525 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
CACNA1A-209ENST00000587525 FRAT1Q92837 279 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-209ENST00000587525 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
CACNA1A-209ENST00000587525 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
CACNA1A-209ENST00000587525 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-209ENST00000587525 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
CACNA1A-209ENST00000587525 UACAQ9BZF9 1416 aa18.16■□□□□ 0.5
CACNA1A-209ENST00000587525 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
CACNA1A-209ENST00000587525 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
CACNA1A-209ENST00000587525 CCDC7Q96M83 1385 aa18.15■□□□□ 0.5
CACNA1A-209ENST00000587525 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
CACNA1A-209ENST00000587525 CDCA7LQ96GN5 454 aa18.15■□□□□ 0.5
CACNA1A-209ENST00000587525 RCAN3Q9UKA8 241 aa18.15■□□□□ 0.5
CACNA1A-209ENST00000587525 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
CACNA1A-209ENST00000587525 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
CACNA1A-209ENST00000587525 ROCK2O75116 1388 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-209ENST00000587525 AKNAQ7Z591 1439 aa18.13■□□□□ 0.49
CACNA1A-209ENST00000587525 MAPKBP1O60336 1514 aa18.13■□□□□ 0.49
CACNA1A-209ENST00000587525 USP47Q96K76 1375 aa18.12■□□□□ 0.49
CACNA1A-209ENST00000587525 KIF21AQ7Z4S6 1674 aa18.11■□□□□ 0.49
CACNA1A-209ENST00000587525 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
CACNA1A-209ENST00000587525 IL27Q8NEV9 243 aa18.11■□□□□ 0.49
CACNA1A-209ENST00000587525 CASKIN1Q8WXD9 1431 aa18.11■□□□□ 0.49
CACNA1A-209ENST00000587525 NBPF1Q3BBV0 1214 aa18.11■□□□□ 0.49
CACNA1A-209ENST00000587525 PPM1GO15355 546 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-209ENST00000587525 PRDM2Q13029 1718 aa18.09■□□□□ 0.49
CACNA1A-209ENST00000587525 NAIPQ13075 1403 aa18.09■□□□□ 0.49
CACNA1A-209ENST00000587525 PANK3Q9H999 370 aa18.09■□□□□ 0.49
CACNA1A-209ENST00000587525 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.49
CACNA1A-209ENST00000587525 SPRYD3Q8NCJ5 442 aa18.08■□□□□ 0.48
CACNA1A-209ENST00000587525 FANCIQ9NVI1 1328 aa18.06■□□□□ 0.48
CACNA1A-209ENST00000587525 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
CACNA1A-209ENST00000587525 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
CACNA1A-209ENST00000587525 RRP7AQ9Y3A4 280 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-209ENST00000587525 CDK13Q14004 1512 aaKnown RBP18.04■□□□□ 0.48
CACNA1A-209ENST00000587525 IFT140Q96RY7 1462 aa18.03■□□□□ 0.48
CACNA1A-209ENST00000587525 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
CACNA1A-209ENST00000587525 TMF1P82094 1093 aa18.02■□□□□ 0.48
CACNA1A-209ENST00000587525 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.47
CACNA1A-209ENST00000587525 ANKRD30AQ9BXX3 1397 aa18.01■□□□□ 0.47
CACNA1A-209ENST00000587525 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
CACNA1A-209ENST00000587525 IPO9Q96P70 1041 aaKnown RBP18.01■□□□□ 0.47
CACNA1A-209ENST00000587525 PRG4Q92954 1404 aaPredicted RBP18■□□□□ 0.47
CACNA1A-209ENST00000587525 GGT6Q6P531 493 aa18■□□□□ 0.47
CACNA1A-209ENST00000587525 HFM1A2PYH4 1435 aa18■□□□□ 0.47
CACNA1A-209ENST00000587525 CNTLNQ9NXG0 1405 aa18■□□□□ 0.47
CACNA1A-209ENST00000587525 STAG3Q9UJ98 1225 aa18■□□□□ 0.47
CACNA1A-209ENST00000587525 CRBNQ96SW2 442 aa17.99■□□□□ 0.47
CACNA1A-209ENST00000587525 STK26Q9P289 416 aa17.99■□□□□ 0.47
CACNA1A-209ENST00000587525 KTN1Q86UP2 1357 aaKnown RBP17.98■□□□□ 0.47
CACNA1A-209ENST00000587525 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
CACNA1A-209ENST00000587525 NLRP13Q86W25 1043 aa17.96■□□□□ 0.47
CACNA1A-209ENST00000587525 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.96■□□□□ 0.47
CACNA1A-209ENST00000587525 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-209ENST00000587525 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
CACNA1A-209ENST00000587525 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-209ENST00000587525 KIF3BO15066 747 aa17.94■□□□□ 0.46
CACNA1A-209ENST00000587525 PDE4AP27815 886 aa17.93■□□□□ 0.46
CACNA1A-209ENST00000587525 ARID4BQ4LE39 1312 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-209ENST00000587525 SLKQ9H2G2 1235 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-209ENST00000587525 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-209ENST00000587525 PNISRQ8TF01 805 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-209ENST00000587525 RALBP1Q15311 655 aa17.9■□□□□ 0.46
CACNA1A-209ENST00000587525 TRAK1Q9UPV9 953 aa17.9■□□□□ 0.46
CACNA1A-209ENST00000587525 APAF1O14727 1248 aa17.9■□□□□ 0.46
CACNA1A-209ENST00000587525 SOX12O15370 315 aa17.9■□□□□ 0.46
CACNA1A-209ENST00000587525 NPM1P06748 294 aaKnown RBP eCLIP17.89■□□□□ 0.45
CACNA1A-209ENST00000587525 ADAMTS8Q9UP79 889 aa17.89■□□□□ 0.45
CACNA1A-209ENST00000587525 HSP90AA1P07900 732 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-209ENST00000587525 AFAP1Q8N556 730 aa17.86■□□□□ 0.45
CACNA1A-209ENST00000587525 CUL7Q14999 1698 aa17.86■□□□□ 0.45
CACNA1A-209ENST00000587525 BRPF3Q9ULD4 1205 aa17.86■□□□□ 0.45
CACNA1A-209ENST00000587525 ANKRD50Q9ULJ7 1429 aa17.86■□□□□ 0.45
CACNA1A-209ENST00000587525 KIF15Q9NS87 1388 aa17.85■□□□□ 0.45
CACNA1A-209ENST00000587525 MLECQ14165 292 aa17.84■□□□□ 0.45
CACNA1A-209ENST00000587525 TPRNQ4KMQ1 711 aa17.84■□□□□ 0.45
CACNA1A-209ENST00000587525 CARMIL2Q6F5E8 1435 aa17.84■□□□□ 0.45
CACNA1A-209ENST00000587525 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms