RNA–Protein interactions for RNA: ENST00000586921.1

SMARCA4-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 569 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-211ENST00000586921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
SMARCA4-211ENST00000586921 HNRNPUL2Q1KMD3 747 aaKnown RBP22.27■■□□□ 1.16
SMARCA4-211ENST00000586921 SETD1BQ9UPS6 1966 aaKnown RBP22.25■■□□□ 1.15
SMARCA4-211ENST00000586921 UBAP1LF5GYI3 381 aa22.23■■□□□ 1.15
SMARCA4-211ENST00000586921 HECW1Q76N89 1606 aa22.23■■□□□ 1.15
SMARCA4-211ENST00000586921 P3H3Q8IVL6 736 aa22.21■■□□□ 1.15
SMARCA4-211ENST00000586921 MED1Q15648 1581 aaPredicted RBP22.21■■□□□ 1.15
SMARCA4-211ENST00000586921 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.14
SMARCA4-211ENST00000586921 C9orf84Q5VXU9 1444 aa22.19■■□□□ 1.14
SMARCA4-211ENST00000586921 ATP10AO60312 1499 aa22.18■■□□□ 1.14
SMARCA4-211ENST00000586921 NCOA1Q15788 1441 aa22.14■■□□□ 1.14
SMARCA4-211ENST00000586921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.12■■□□□ 1.13
SMARCA4-211ENST00000586921 NUP153P49790 1475 aaKnown RBP22.11■■□□□ 1.13
SMARCA4-211ENST00000586921 SCAPERQ9BY12 1400 aa22.1■■□□□ 1.13
SMARCA4-211ENST00000586921 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
SMARCA4-211ENST00000586921 C3P01024 1663 aa22.07■■□□□ 1.12
SMARCA4-211ENST00000586921 ZNF335Q9H4Z2 1342 aaPredicted RBP22.07■■□□□ 1.12
SMARCA4-211ENST00000586921 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
SMARCA4-211ENST00000586921 HSPA1LP34931 641 aa22.05■■□□□ 1.12
SMARCA4-211ENST00000586921 TRAPPC8Q9Y2L5 1435 aa22.05■■□□□ 1.12
SMARCA4-211ENST00000586921 SAMD9Q5K651 1589 aa22.03■■□□□ 1.12
SMARCA4-211ENST00000586921 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
SMARCA4-211ENST00000586921 CAMSAP1Q5T5Y3 1602 aa22.02■■□□□ 1.11
SMARCA4-211ENST00000586921 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
SMARCA4-211ENST00000586921 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
SMARCA4-211ENST00000586921 PIP4K2BP78356 416 aa21.96■■□□□ 1.11
SMARCA4-211ENST00000586921 NCKAP5LQ9HCH0 1330 aa21.96■■□□□ 1.11
SMARCA4-211ENST00000586921 PLCH2O75038 1416 aa21.96■■□□□ 1.11
SMARCA4-211ENST00000586921 ZNF518AQ6AHZ1 1483 aa21.94■■□□□ 1.1
SMARCA4-211ENST00000586921 MYT1LQ9UL68 1186 aa21.91■■□□□ 1.1
SMARCA4-211ENST00000586921 REREQ9P2R6 1566 aa21.91■■□□□ 1.1
SMARCA4-211ENST00000586921 DIP2CQ9Y2E4 1556 aa21.91■■□□□ 1.1
SMARCA4-211ENST00000586921 TOM1O60784 492 aa21.89■■□□□ 1.09
SMARCA4-211ENST00000586921 KDM5CP41229 1560 aa21.89■■□□□ 1.09
SMARCA4-211ENST00000586921 CNTLNQ9NXG0 1405 aa21.89■■□□□ 1.09
SMARCA4-211ENST00000586921 EFCAB2Q5VUJ9 269 aa21.88■■□□□ 1.09
SMARCA4-211ENST00000586921 AGLP35573 1532 aa21.87■■□□□ 1.09
SMARCA4-211ENST00000586921 PKD2Q13563 968 aa21.87■■□□□ 1.09
SMARCA4-211ENST00000586921 NPATQ14207 1427 aa21.87■■□□□ 1.09
SMARCA4-211ENST00000586921 AFAP1Q8N556 730 aa21.86■■□□□ 1.09
SMARCA4-211ENST00000586921 PLA2R1Q13018 1463 aa21.85■■□□□ 1.09
SMARCA4-211ENST00000586921 MYO5CQ9NQX4 1742 aa21.84■■□□□ 1.09
SMARCA4-211ENST00000586921 ABCA6Q8N139 1617 aa21.84■■□□□ 1.09
SMARCA4-211ENST00000586921 PPP6R1Q9UPN7 881 aa21.82■■□□□ 1.08
SMARCA4-211ENST00000586921 TCOF1Q13428 1488 aaKnown RBP21.82■■□□□ 1.08
SMARCA4-211ENST00000586921 SUPT6HQ7KZ85 1726 aaKnown RBP21.8■■□□□ 1.08
SMARCA4-211ENST00000586921 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
SMARCA4-211ENST00000586921 ZNF142P52746 1687 aaPredicted RBP21.79■■□□□ 1.08
SMARCA4-211ENST00000586921 RANGAP1P46060 587 aaPredicted RBP21.78■■□□□ 1.08
SMARCA4-211ENST00000586921 MROH2AA6NES4 1674 aa21.78■■□□□ 1.08
SMARCA4-211ENST00000586921 MLH3Q9UHC1 1453 aa21.77■■□□□ 1.07
SMARCA4-211ENST00000586921 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.07
SMARCA4-211ENST00000586921 CPS1P31327 1500 aa21.76■■□□□ 1.07
SMARCA4-211ENST00000586921 ARHGAP5Q13017 1502 aa21.75■■□□□ 1.07
SMARCA4-211ENST00000586921 CEP170BQ9Y4F5 1589 aaPredicted RBP21.74■■□□□ 1.07
SMARCA4-211ENST00000586921 ZMYM3Q14202 1370 aa21.74■■□□□ 1.07
SMARCA4-211ENST00000586921 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
SMARCA4-211ENST00000586921 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
SMARCA4-211ENST00000586921 RGS17Q9UGC6 210 aaPredicted RBP21.69■■□□□ 1.06
SMARCA4-211ENST00000586921 SHANK2Q9UPX8 1470 aa21.68■■□□□ 1.06
SMARCA4-211ENST00000586921 KIF14Q15058 1648 aa21.66■■□□□ 1.06
SMARCA4-211ENST00000586921 ALKQ9UM73 1620 aa21.66■■□□□ 1.06
SMARCA4-211ENST00000586921 KIDINS220Q9ULH0 1771 aa21.63■■□□□ 1.05
SMARCA4-211ENST00000586921 CLTCQ00610 1675 aaKnown RBP21.62■■□□□ 1.05
SMARCA4-211ENST00000586921 POLR1AO95602 1720 aaPredicted RBP21.6■■□□□ 1.05
SMARCA4-211ENST00000586921 CDK11AQ9UQ88 783 aaPredicted RBP21.6■■□□□ 1.05
SMARCA4-211ENST00000586921 ABCC1P33527 1531 aa21.6■■□□□ 1.05
SMARCA4-211ENST00000586921 NEURL4Q96JN8 1562 aa21.58■■□□□ 1.05
SMARCA4-211ENST00000586921 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.04
SMARCA4-211ENST00000586921 ITSN2Q9NZM3 1697 aa21.57■■□□□ 1.04
SMARCA4-211ENST00000586921 DNMT1P26358 1616 aaKnown RBP21.56■■□□□ 1.04
SMARCA4-211ENST00000586921 CDC42BPBQ9Y5S2 1711 aa21.56■■□□□ 1.04
SMARCA4-211ENST00000586921 ATP1B4Q9UN42 357 aaPredicted RBP21.56■■□□□ 1.04
SMARCA4-211ENST00000586921 VWDEQ8N2E2 1590 aa21.55■■□□□ 1.04
SMARCA4-211ENST00000586921 CLIP1P30622 1438 aa21.55■■□□□ 1.04
SMARCA4-211ENST00000586921 TROQ12816 1431 aaPredicted RBP21.55■■□□□ 1.04
SMARCA4-211ENST00000586921 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
SMARCA4-211ENST00000586921 POTEAQ6S8J7 498 aa21.53■■□□□ 1.04
SMARCA4-211ENST00000586921 PREX2Q70Z35 1606 aa21.51■■□□□ 1.03
SMARCA4-211ENST00000586921 RNF17Q9BXT8 1623 aaKnown RBP21.5■■□□□ 1.03
SMARCA4-211ENST00000586921 SETD1AO15047 1707 aaKnown RBP21.49■■□□□ 1.03
SMARCA4-211ENST00000586921 SAMD9LQ8IVG5 1584 aa21.47■■□□□ 1.03
SMARCA4-211ENST00000586921 GGT6Q6P531 493 aa21.45■■□□□ 1.02
SMARCA4-211ENST00000586921 ANKLE2Q86XL3 938 aa21.45■■□□□ 1.02
SMARCA4-211ENST00000586921 LRRC7Q96NW7 1537 aa21.44■■□□□ 1.02
SMARCA4-211ENST00000586921 PLXNC1O60486 1568 aa21.44■■□□□ 1.02
SMARCA4-211ENST00000586921 SPAG9O60271 1321 aaKnown RBP21.43■■□□□ 1.02
SMARCA4-211ENST00000586921 FMN1Q68DA7 1419 aa21.43■■□□□ 1.02
SMARCA4-211ENST00000586921 NPHP4O75161 1426 aaPredicted RBP21.42■■□□□ 1.02
SMARCA4-211ENST00000586921 SYNMO15061 1565 aa21.41■■□□□ 1.02
SMARCA4-211ENST00000586921 A2MP01023 1474 aa21.4■■□□□ 1.02
SMARCA4-211ENST00000586921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.4■■□□□ 1.02
SMARCA4-211ENST00000586921 TNRQ92752 1358 aa21.39■■□□□ 1.02
SMARCA4-211ENST00000586921 ATP7AQ04656 1500 aa21.39■■□□□ 1.01
SMARCA4-211ENST00000586921 MED14O60244 1454 aa21.39■■□□□ 1.01
SMARCA4-211ENST00000586921 STRCP1A6NGW2 1772 aa21.38■■□□□ 1.01
SMARCA4-211ENST00000586921 DEPDC5O75140 1603 aa21.38■■□□□ 1.01
SMARCA4-211ENST00000586921 IQGAP1P46940 1657 aa21.37■■□□□ 1.01
SMARCA4-211ENST00000586921 SRCAPQ6ZRS2 3230 aa21.36■■□□□ 1.01
SMARCA4-211ENST00000586921 SYCP2Q9BX26 1530 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms