RNA–Protein interactions for RNA: ENST00000586544.1

ILF3-205, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best)

Gene ILF3, Length 3,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-205ENST00000586544 RBM10P98175 930 aaKnown RBP13.67□□□□□ -0.22
ILF3-205ENST00000586544 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
ILF3-205ENST00000586544 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
ILF3-205ENST00000586544 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
ILF3-205ENST00000586544 FGD1P98174 961 aa13.65□□□□□ -0.22
ILF3-205ENST00000586544 HSP90AA1P07900 732 aaKnown RBP13.64□□□□□ -0.23
ILF3-205ENST00000586544 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.64□□□□□ -0.23
ILF3-205ENST00000586544 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
ILF3-205ENST00000586544 NESP48681 1621 aa13.62□□□□□ -0.23
ILF3-205ENST00000586544 PHLDB1Q86UU1 1377 aa13.61□□□□□ -0.23
ILF3-205ENST00000586544 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
ILF3-205ENST00000586544 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
ILF3-205ENST00000586544 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
ILF3-205ENST00000586544 PPM1GO15355 546 aaPredicted RBP13.6□□□□□ -0.23
ILF3-205ENST00000586544 FRAT1Q92837 279 aaPredicted RBP13.6□□□□□ -0.23
ILF3-205ENST00000586544 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
ILF3-205ENST00000586544 TIAM1Q13009 1591 aa13.59□□□□□ -0.23
ILF3-205ENST00000586544 PAXIP1Q6ZW49 1069 aaPredicted RBP13.59□□□□□ -0.23
ILF3-205ENST00000586544 NOP58Q9Y2X3 529 aaKnown RBP13.59□□□□□ -0.23
ILF3-205ENST00000586544 MSH5O43196 834 aa13.58□□□□□ -0.24
ILF3-205ENST00000586544 RSPH6AQ9H0K4 717 aa13.58□□□□□ -0.24
ILF3-205ENST00000586544 POLA1P09884 1462 aaPredicted RBP13.58□□□□□ -0.24
ILF3-205ENST00000586544 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
ILF3-205ENST00000586544 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
ILF3-205ENST00000586544 NAP1L5Q96NT1 182 aaPredicted RBP13.57□□□□□ -0.24
ILF3-205ENST00000586544 SAFB2Q14151 953 aaKnown RBP eCLIP13.55□□□□□ -0.24
ILF3-205ENST00000586544 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
ILF3-205ENST00000586544 PRDM2Q13029 1718 aa13.54□□□□□ -0.24
ILF3-205ENST00000586544 HSP90AA2PQ14568 343 aaPredicted RBP13.53□□□□□ -0.24
ILF3-205ENST00000586544 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
ILF3-205ENST00000586544 MAP3K1Q13233 1512 aa13.52□□□□□ -0.24
ILF3-205ENST00000586544 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
ILF3-205ENST00000586544 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
ILF3-205ENST00000586544 NUP155O75694 1391 aa13.52□□□□□ -0.25
ILF3-205ENST00000586544 ZNF644Q9H582 1327 aaPredicted RBP13.52□□□□□ -0.25
ILF3-205ENST00000586544 DHX37Q8IY37 1157 aaKnown RBP13.51□□□□□ -0.25
ILF3-205ENST00000586544 AAMPQ13685 434 aa13.51□□□□□ -0.25
ILF3-205ENST00000586544 PRKRIP1Q9H875 184 aaPredicted RBP13.51□□□□□ -0.25
ILF3-205ENST00000586544 FMN1Q68DA7 1419 aa13.51□□□□□ -0.25
ILF3-205ENST00000586544 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
ILF3-205ENST00000586544 PCF11O94913 1555 aaKnown RBP13.5□□□□□ -0.25
ILF3-205ENST00000586544 ESF1Q9H501 851 aaKnown RBP13.5□□□□□ -0.25
ILF3-205ENST00000586544 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
ILF3-205ENST00000586544 PLIN1O60240 522 aa13.49□□□□□ -0.25
ILF3-205ENST00000586544 CASKIN1Q8WXD9 1431 aa13.49□□□□□ -0.25
ILF3-205ENST00000586544 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
ILF3-205ENST00000586544 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
ILF3-205ENST00000586544 FYCO1Q9BQS8 1478 aa13.47□□□□□ -0.25
ILF3-205ENST00000586544 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
ILF3-205ENST00000586544 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.26
ILF3-205ENST00000586544 TMF1P82094 1093 aa13.46□□□□□ -0.26
ILF3-205ENST00000586544 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.26
ILF3-205ENST00000586544 AMER1Q5JTC6 1135 aaPredicted RBP13.45□□□□□ -0.26
ILF3-205ENST00000586544 EFCAB5A4FU69 1503 aa13.45□□□□□ -0.26
ILF3-205ENST00000586544 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
ILF3-205ENST00000586544 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
ILF3-205ENST00000586544 CCDC146Q8IYE0 955 aa13.43□□□□□ -0.26
ILF3-205ENST00000586544 MAPKBP1O60336 1514 aa13.43□□□□□ -0.26
ILF3-205ENST00000586544 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
ILF3-205ENST00000586544 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
ILF3-205ENST00000586544 FGD6Q6ZV73 1430 aa13.43□□□□□ -0.26
ILF3-205ENST00000586544 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
ILF3-205ENST00000586544 FTSJ3Q8IY81 847 aaKnown RBP13.42□□□□□ -0.26
ILF3-205ENST00000586544 SLC4A3P48751 1232 aa13.42□□□□□ -0.26
ILF3-205ENST00000586544 GGT6Q6P531 493 aa13.42□□□□□ -0.26
ILF3-205ENST00000586544 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
ILF3-205ENST00000586544 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
ILF3-205ENST00000586544 WASHC2AQ641Q2 1341 aa13.41□□□□□ -0.26
ILF3-205ENST00000586544 CUL7Q14999 1698 aa13.4□□□□□ -0.26
ILF3-205ENST00000586544 SOX12O15370 315 aa13.4□□□□□ -0.26
ILF3-205ENST00000586544 ARID4BQ4LE39 1312 aaPredicted RBP13.4□□□□□ -0.26
ILF3-205ENST00000586544 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
ILF3-205ENST00000586544 CLUAP1Q96AJ1 413 aa13.4□□□□□ -0.26
ILF3-205ENST00000586544 DDRGK1Q96HY6 314 aa13.39□□□□□ -0.27
ILF3-205ENST00000586544 STK26Q9P289 416 aa13.39□□□□□ -0.27
ILF3-205ENST00000586544 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.27
ILF3-205ENST00000586544 EXOC6Q8TAG9 804 aa13.39□□□□□ -0.27
ILF3-205ENST00000586544 ERCC6Q03468 1493 aa13.39□□□□□ -0.27
ILF3-205ENST00000586544 CCDC18Q5T9S5 1454 aa13.39□□□□□ -0.27
ILF3-205ENST00000586544 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
ILF3-205ENST00000586544 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
ILF3-205ENST00000586544 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
ILF3-205ENST00000586544 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
ILF3-205ENST00000586544 WDR97A6NE52 1622 aa13.37□□□□□ -0.27
ILF3-205ENST00000586544 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
ILF3-205ENST00000586544 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
ILF3-205ENST00000586544 CFAP53Q96M91 514 aa13.37□□□□□ -0.27
ILF3-205ENST00000586544 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
ILF3-205ENST00000586544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.36□□□□□ -0.27
ILF3-205ENST00000586544 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
ILF3-205ENST00000586544 BECN1Q14457 450 aa13.35□□□□□ -0.27
ILF3-205ENST00000586544 PANK3Q9H999 370 aa13.35□□□□□ -0.27
ILF3-205ENST00000586544 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
ILF3-205ENST00000586544 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
ILF3-205ENST00000586544 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
ILF3-205ENST00000586544 ANP32BQ92688 251 aaKnown RBP13.35□□□□□ -0.27
ILF3-205ENST00000586544 POGKQ9P215 609 aa13.35□□□□□ -0.27
ILF3-205ENST00000586544 RRP7AQ9Y3A4 280 aaKnown RBP13.35□□□□□ -0.27
ILF3-205ENST00000586544 NLRP13Q86W25 1043 aa13.34□□□□□ -0.27
ILF3-205ENST00000586544 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms