RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 SYNJ2O15056 1496 aa17.19■□□□□ 0.34
SMARCA4-208ENST00000585799 FKBP8Q14318 412 aa17.18■□□□□ 0.34
SMARCA4-208ENST00000585799 HFM1A2PYH4 1435 aa17.18■□□□□ 0.34
SMARCA4-208ENST00000585799 CARD11Q9BXL7 1154 aa17.18■□□□□ 0.34
SMARCA4-208ENST00000585799 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
SMARCA4-208ENST00000585799 MRS2Q9HD23 443 aa17.17■□□□□ 0.34
SMARCA4-208ENST00000585799 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
SMARCA4-208ENST00000585799 THOC2Q8NI27 1593 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-208ENST00000585799 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-208ENST00000585799 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
SMARCA4-208ENST00000585799 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.33
SMARCA4-208ENST00000585799 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
SMARCA4-208ENST00000585799 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-208ENST00000585799 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
SMARCA4-208ENST00000585799 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
SMARCA4-208ENST00000585799 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
SMARCA4-208ENST00000585799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMARCA4-208ENST00000585799 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-208ENST00000585799 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
SMARCA4-208ENST00000585799 MAPKBP1O60336 1514 aa17.09■□□□□ 0.33
SMARCA4-208ENST00000585799 MIA2Q96PC5 1412 aa17.09■□□□□ 0.33
SMARCA4-208ENST00000585799 WDR62O43379 1518 aa17.08■□□□□ 0.33
SMARCA4-208ENST00000585799 DAPK1P53355 1430 aa17.08■□□□□ 0.32
SMARCA4-208ENST00000585799 NUP153P49790 1475 aaKnown RBP17.07■□□□□ 0.32
SMARCA4-208ENST00000585799 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
SMARCA4-208ENST00000585799 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
SMARCA4-208ENST00000585799 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
SMARCA4-208ENST00000585799 ABCC5O15440 1437 aa17.05■□□□□ 0.32
SMARCA4-208ENST00000585799 ARHGEF11O15085 1522 aa17.04■□□□□ 0.32
SMARCA4-208ENST00000585799 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
SMARCA4-208ENST00000585799 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
SMARCA4-208ENST00000585799 KIF15Q9NS87 1388 aa17.04■□□□□ 0.32
SMARCA4-208ENST00000585799 ANKRD50Q9ULJ7 1429 aa17.04■□□□□ 0.32
SMARCA4-208ENST00000585799 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
SMARCA4-208ENST00000585799 UGGT2Q9NYU1 1516 aa17.03■□□□□ 0.32
SMARCA4-208ENST00000585799 SAMD9Q5K651 1589 aa17.03■□□□□ 0.32
SMARCA4-208ENST00000585799 AFAP1Q8N556 730 aa17.02■□□□□ 0.32
SMARCA4-208ENST00000585799 KIF3BO15066 747 aa17.01■□□□□ 0.31
SMARCA4-208ENST00000585799 SPAG9O60271 1321 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-208ENST00000585799 GGT6Q6P531 493 aa17■□□□□ 0.31
SMARCA4-208ENST00000585799 KIAA0556O60303 1618 aa16.99■□□□□ 0.31
SMARCA4-208ENST00000585799 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
SMARCA4-208ENST00000585799 WASHC2AQ641Q2 1341 aa16.97■□□□□ 0.31
SMARCA4-208ENST00000585799 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
SMARCA4-208ENST00000585799 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
SMARCA4-208ENST00000585799 CAMSAP2Q08AD1 1489 aa16.96■□□□□ 0.31
SMARCA4-208ENST00000585799 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.31
SMARCA4-208ENST00000585799 ATP10BO94823 1461 aa16.96■□□□□ 0.31
SMARCA4-208ENST00000585799 ST20-MTHFSA0A0A6YYL1 179 aa16.95■□□□□ 0.3
SMARCA4-208ENST00000585799 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
SMARCA4-208ENST00000585799 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-208ENST00000585799 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
SMARCA4-208ENST00000585799 GPATCH8Q9UKJ3 1502 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-208ENST00000585799 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
SMARCA4-208ENST00000585799 ARHGAP5Q13017 1502 aa16.93■□□□□ 0.3
SMARCA4-208ENST00000585799 CEP170Q5SW79 1584 aa16.92■□□□□ 0.3
SMARCA4-208ENST00000585799 ROCK2O75116 1388 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-208ENST00000585799 NCOA1Q15788 1441 aa16.92■□□□□ 0.3
SMARCA4-208ENST00000585799 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-208ENST00000585799 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-208ENST00000585799 NUP160Q12769 1436 aa16.9■□□□□ 0.3
SMARCA4-208ENST00000585799 AKNAQ7Z591 1439 aa16.89■□□□□ 0.29
SMARCA4-208ENST00000585799 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
SMARCA4-208ENST00000585799 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
SMARCA4-208ENST00000585799 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
SMARCA4-208ENST00000585799 USP47Q96K76 1375 aa16.88■□□□□ 0.29
SMARCA4-208ENST00000585799 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
SMARCA4-208ENST00000585799 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
SMARCA4-208ENST00000585799 NUTM2DQ5VT03 806 aaPredicted RBP16.86■□□□□ 0.29
SMARCA4-208ENST00000585799 PRKRIP1Q9H875 184 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-208ENST00000585799 KIAA1107Q9UPP5 1409 aa16.85■□□□□ 0.29
SMARCA4-208ENST00000585799 MLECQ14165 292 aa16.85■□□□□ 0.29
SMARCA4-208ENST00000585799 CCDC184Q52MB2 194 aa16.84■□□□□ 0.29
SMARCA4-208ENST00000585799 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
SMARCA4-208ENST00000585799 CCDC7Q96M83 1385 aa16.84■□□□□ 0.29
SMARCA4-208ENST00000585799 TCOF1Q13428 1488 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-208ENST00000585799 KANK1Q14678 1352 aa16.82■□□□□ 0.28
SMARCA4-208ENST00000585799 KIF14Q15058 1648 aa16.8■□□□□ 0.28
SMARCA4-208ENST00000585799 SAFB2Q14151 953 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■□□□□ 10.3
SMARCA4-208ENST00000585799 ESF1Q9H501 851 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-208ENST00000585799 TMF1P82094 1093 aa16.78■□□□□ 0.28
SMARCA4-208ENST00000585799 KDM6BO15054 1643 aa16.77■□□□□ 0.28
SMARCA4-208ENST00000585799 KNSTRNQ9Y448 316 aa16.77■□□□□ 0.27
SMARCA4-208ENST00000585799 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
SMARCA4-208ENST00000585799 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
SMARCA4-208ENST00000585799 TNNT2P45379 298 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-208ENST00000585799 CCDC141Q6ZP82 1450 aa16.75■□□□□ 0.27
SMARCA4-208ENST00000585799 WASHC2CQ9Y4E1 1318 aa16.74■□□□□ 0.27
SMARCA4-208ENST00000585799 RPRD2Q5VT52 1461 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-208ENST00000585799 PLEKHH2Q8IVE3 1493 aa16.72■□□□□ 0.27
SMARCA4-208ENST00000585799 RAPGEF3O95398 923 aa16.72■□□□□ 0.27
SMARCA4-208ENST00000585799 LRRIQ1Q96JM4 1722 aa16.72■□□□□ 0.27
SMARCA4-208ENST00000585799 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMARCA4-208ENST00000585799 STK26Q9P289 416 aa16.71■□□□□ 0.27
SMARCA4-208ENST00000585799 CNTLNQ9NXG0 1405 aa16.71■□□□□ 0.27
SMARCA4-208ENST00000585799 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-208ENST00000585799 PANK3Q9H999 370 aa16.7■□□□□ 0.26
SMARCA4-208ENST00000585799 TRAK1Q9UPV9 953 aa16.68■□□□□ 0.26
SMARCA4-208ENST00000585799 SYCP2Q9BX26 1530 aa16.67■□□□□ 0.26
SMARCA4-208ENST00000585799 DNMT1P26358 1616 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms