RNA–Protein interactions for RNA: ENST00000585089.5

IFT20-214, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-214ENST00000585089 SPATA31D1Q6ZQQ2 1576 aa25.08■■□□□ 1.61
IFT20-214ENST00000585089 HECW1Q76N89 1606 aa25.05■■□□□ 1.6
IFT20-214ENST00000585089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.05■■□□□ 1.6
IFT20-214ENST00000585089 STRCQ7RTU9 1775 aa25.03■■□□□ 1.6
IFT20-214ENST00000585089 ARHGEF12Q9NZN5 1544 aa25.02■■□□□ 1.6
IFT20-214ENST00000585089 ATP10AO60312 1499 aa24.97■■□□□ 1.59
IFT20-214ENST00000585089 SETD1BQ9UPS6 1966 aaKnown RBP24.97■■□□□ 1.59
IFT20-214ENST00000585089 SCAPERQ9BY12 1400 aa24.96■■□□□ 1.59
IFT20-214ENST00000585089 CEBPAP49715 358 aaPredicted RBP24.96■■□□□ 1.59
IFT20-214ENST00000585089 C9orf84Q5VXU9 1444 aa24.95■■□□□ 1.59
IFT20-214ENST00000585089 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.59
IFT20-214ENST00000585089 RANGAP1P46060 587 aaPredicted RBP24.93■■□□□ 1.58
IFT20-214ENST00000585089 PTPRTO14522 1441 aa24.9■■□□□ 1.58
IFT20-214ENST00000585089 PLCH2O75038 1416 aa24.88■■□□□ 1.57
IFT20-214ENST00000585089 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
IFT20-214ENST00000585089 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.57
IFT20-214ENST00000585089 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
IFT20-214ENST00000585089 MYO5CQ9NQX4 1742 aa24.83■■□□□ 1.57
IFT20-214ENST00000585089 LTBP4Q8N2S1 1624 aa24.81■■□□□ 1.56
IFT20-214ENST00000585089 CDK13Q14004 1512 aaKnown RBP24.81■■□□□ 1.56
IFT20-214ENST00000585089 C3P01024 1663 aa24.78■■□□□ 1.56
IFT20-214ENST00000585089 ZNF518AQ6AHZ1 1483 aa24.78■■□□□ 1.56
IFT20-214ENST00000585089 MYT1LQ9UL68 1186 aa24.78■■□□□ 1.56
IFT20-214ENST00000585089 ESF1Q9H501 851 aaKnown RBP24.75■■□□□ 1.55
IFT20-214ENST00000585089 KDM5CP41229 1560 aa24.72■■□□□ 1.55
IFT20-214ENST00000585089 REREQ9P2R6 1566 aa24.71■■□□□ 1.55
IFT20-214ENST00000585089 DIP2CQ9Y2E4 1556 aa24.71■■□□□ 1.55
IFT20-214ENST00000585089 TRAPPC8Q9Y2L5 1435 aa24.71■■□□□ 1.55
IFT20-214ENST00000585089 AFAP1Q8N556 730 aa24.71■■□□□ 1.55
IFT20-214ENST00000585089 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
IFT20-214ENST00000585089 ARHGAP5Q13017 1502 aa24.68■■□□□ 1.54
IFT20-214ENST00000585089 CDK11AQ9UQ88 783 aaPredicted RBP24.67■■□□□ 1.54
IFT20-214ENST00000585089 ATP1B4Q9UN42 357 aaPredicted RBP24.66■■□□□ 1.54
IFT20-214ENST00000585089 KIF14Q15058 1648 aa24.65■■□□□ 1.54
IFT20-214ENST00000585089 ABCA6Q8N139 1617 aa24.65■■□□□ 1.54
IFT20-214ENST00000585089 EEA1Q15075 1411 aa24.64■■□□□ 1.54
IFT20-214ENST00000585089 UBAP1LF5GYI3 381 aa24.64■■□□□ 1.54
IFT20-214ENST00000585089 AGLP35573 1532 aa24.64■■□□□ 1.53
IFT20-214ENST00000585089 CNTLNQ9NXG0 1405 aa24.62■■□□□ 1.53
IFT20-214ENST00000585089 CAMSAP1Q5T5Y3 1602 aa24.62■■□□□ 1.53
IFT20-214ENST00000585089 MLH3Q9UHC1 1453 aa24.62■■□□□ 1.53
IFT20-214ENST00000585089 CLIP1P30622 1438 aa24.57■■□□□ 1.52
IFT20-214ENST00000585089 TROQ12816 1431 aaPredicted RBP24.57■■□□□ 1.52
IFT20-214ENST00000585089 FMN1Q68DA7 1419 aa24.57■■□□□ 1.52
IFT20-214ENST00000585089 ZNF335Q9H4Z2 1342 aaPredicted RBP24.56■■□□□ 1.52
IFT20-214ENST00000585089 NPATQ14207 1427 aa24.55■■□□□ 1.52
IFT20-214ENST00000585089 CDC42BPBQ9Y5S2 1711 aa24.55■■□□□ 1.52
IFT20-214ENST00000585089 MROH2AA6NES4 1674 aa24.54■■□□□ 1.52
IFT20-214ENST00000585089 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
IFT20-214ENST00000585089 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
IFT20-214ENST00000585089 SUPT6HQ7KZ85 1726 aaKnown RBP24.5■■□□□ 1.51
IFT20-214ENST00000585089 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
IFT20-214ENST00000585089 ABCC1P33527 1531 aa24.5■■□□□ 1.51
IFT20-214ENST00000585089 PKD2Q13563 968 aa24.49■■□□□ 1.51
IFT20-214ENST00000585089 PREX2Q70Z35 1606 aa24.48■■□□□ 1.51
IFT20-214ENST00000585089 ZMYM3Q14202 1370 aa24.46■■□□□ 1.51
IFT20-214ENST00000585089 ZNF142P52746 1687 aaPredicted RBP24.46■■□□□ 1.51
IFT20-214ENST00000585089 MED1Q15648 1581 aaPredicted RBP24.46■■□□□ 1.51
IFT20-214ENST00000585089 PLA2R1Q13018 1463 aa24.45■■□□□ 1.51
IFT20-214ENST00000585089 MYO3AQ8NEV4 1616 aa24.43■■□□□ 1.5
IFT20-214ENST00000585089 SCAF1Q9H7N4 1312 aaKnown RBP24.42■■□□□ 1.5
IFT20-214ENST00000585089 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
IFT20-214ENST00000585089 TCOF1Q13428 1488 aaKnown RBP24.4■■□□□ 1.5
IFT20-214ENST00000585089 HSPA1LP34931 641 aa24.4■■□□□ 1.5
IFT20-214ENST00000585089 CEP170BQ9Y4F5 1589 aaPredicted RBP24.4■■□□□ 1.5
IFT20-214ENST00000585089 CLTCQ00610 1675 aaKnown RBP24.4■■□□□ 1.5
IFT20-214ENST00000585089 ARHGAP35Q9NRY4 1499 aa24.39■■□□□ 1.5
IFT20-214ENST00000585089 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
IFT20-214ENST00000585089 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
IFT20-214ENST00000585089 PIP4K2BP78356 416 aa24.36■■□□□ 1.49
IFT20-214ENST00000585089 SAMD9LQ8IVG5 1584 aa24.36■■□□□ 1.49
IFT20-214ENST00000585089 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
IFT20-214ENST00000585089 TOM1O60784 492 aa24.35■■□□□ 1.49
IFT20-214ENST00000585089 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
IFT20-214ENST00000585089 PTPRKQ15262 1439 aa24.33■■□□□ 1.49
IFT20-214ENST00000585089 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
IFT20-214ENST00000585089 EHMT2Q96KQ7 1210 aa24.31■■□□□ 1.48
IFT20-214ENST00000585089 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
IFT20-214ENST00000585089 CPS1P31327 1500 aa24.29■■□□□ 1.48
IFT20-214ENST00000585089 CCDC18Q5T9S5 1454 aa24.28■■□□□ 1.48
IFT20-214ENST00000585089 ATP7AQ04656 1500 aa24.26■■□□□ 1.47
IFT20-214ENST00000585089 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
IFT20-214ENST00000585089 GGT6Q6P531 493 aa24.26■■□□□ 1.47
IFT20-214ENST00000585089 POLR1AO95602 1720 aaPredicted RBP24.26■■□□□ 1.47
IFT20-214ENST00000585089 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
IFT20-214ENST00000585089 PLXNC1O60486 1568 aa24.25■■□□□ 1.47
IFT20-214ENST00000585089 A2MP01023 1474 aa24.25■■□□□ 1.47
IFT20-214ENST00000585089 DNMT1P26358 1616 aaKnown RBP24.24■■□□□ 1.47
IFT20-214ENST00000585089 HNRNPMP52272 730 aaKnown RBP eCLIP24.23■■□□□ 1.47
IFT20-214ENST00000585089 SHANK2Q9UPX8 1470 aa24.23■■□□□ 1.47
IFT20-214ENST00000585089 INO80Q9ULG1 1556 aaPredicted RBP24.21■■□□□ 1.47
IFT20-214ENST00000585089 CASKIN1Q8WXD9 1431 aa24.19■■□□□ 1.46
IFT20-214ENST00000585089 PLEKHH2Q8IVE3 1493 aa24.18■■□□□ 1.46
IFT20-214ENST00000585089 ADGBQ8N7X0 1667 aa24.18■■□□□ 1.46
IFT20-214ENST00000585089 NEURL4Q96JN8 1562 aa24.17■■□□□ 1.46
IFT20-214ENST00000585089 KIAA1107Q9UPP5 1409 aa24.16■■□□□ 1.46
IFT20-214ENST00000585089 GPATCH8Q9UKJ3 1502 aaKnown RBP24.15■■□□□ 1.46
IFT20-214ENST00000585089 ANKLE2Q86XL3 938 aa24.11■■□□□ 1.45
IFT20-214ENST00000585089 CFDP1Q9UEE9 299 aaPredicted RBP24.11■■□□□ 1.45
IFT20-214ENST00000585089 TNRQ92752 1358 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms