RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
CSNK1D-224ENST00000584672 MAGI2Q86UL8 1455 aa24.01■■□□□ 1.43
CSNK1D-224ENST00000584672 CEBPAP49715 358 aaPredicted RBP24.01■■□□□ 1.43
CSNK1D-224ENST00000584672 SCAPERQ9BY12 1400 aa24■■□□□ 1.43
CSNK1D-224ENST00000584672 CDK13Q14004 1512 aaKnown RBP24■■□□□ 1.43
CSNK1D-224ENST00000584672 ARHGEF12Q9NZN5 1544 aa23.99■■□□□ 1.43
CSNK1D-224ENST00000584672 SOCS7O14512 581 aa23.97■■□□□ 1.43
CSNK1D-224ENST00000584672 STRCQ7RTU9 1775 aa23.97■■□□□ 1.43
CSNK1D-224ENST00000584672 ATP10AO60312 1499 aa23.94■■□□□ 1.42
CSNK1D-224ENST00000584672 C9orf84Q5VXU9 1444 aa23.93■■□□□ 1.42
CSNK1D-224ENST00000584672 SPATA31D1Q6ZQQ2 1576 aa23.92■■□□□ 1.42
CSNK1D-224ENST00000584672 PLCH2O75038 1416 aa23.91■■□□□ 1.42
CSNK1D-224ENST00000584672 MYO5CQ9NQX4 1742 aa23.88■■□□□ 1.41
CSNK1D-224ENST00000584672 UHRF1BP1Q6BDS2 1440 aa23.88■■□□□ 1.41
CSNK1D-224ENST00000584672 DMRT2Q9Y5R5 561 aa23.86■■□□□ 1.41
CSNK1D-224ENST00000584672 ATP1B4Q9UN42 357 aaPredicted RBP23.85■■□□□ 1.41
CSNK1D-224ENST00000584672 MYT1LQ9UL68 1186 aa23.83■■□□□ 1.41
CSNK1D-224ENST00000584672 KIF14Q15058 1648 aa23.82■■□□□ 1.4
CSNK1D-224ENST00000584672 EFCAB2Q5VUJ9 269 aa23.82■■□□□ 1.4
CSNK1D-224ENST00000584672 C3P01024 1663 aa23.8■■□□□ 1.4
CSNK1D-224ENST00000584672 AFAP1Q8N556 730 aa23.79■■□□□ 1.4
CSNK1D-224ENST00000584672 DIP2CQ9Y2E4 1556 aa23.78■■□□□ 1.4
CSNK1D-224ENST00000584672 SETD1BQ9UPS6 1966 aaKnown RBP23.78■■□□□ 1.4
CSNK1D-224ENST00000584672 ZNF518AQ6AHZ1 1483 aa23.78■■□□□ 1.4
CSNK1D-224ENST00000584672 ARHGAP5Q13017 1502 aa23.77■■□□□ 1.4
CSNK1D-224ENST00000584672 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
CSNK1D-224ENST00000584672 KDM5CP41229 1560 aa23.76■■□□□ 1.39
CSNK1D-224ENST00000584672 PTPRTO14522 1441 aa23.76■■□□□ 1.39
CSNK1D-224ENST00000584672 ABCA6Q8N139 1617 aa23.75■■□□□ 1.39
CSNK1D-224ENST00000584672 LTBP4Q8N2S1 1624 aa23.74■■□□□ 1.39
CSNK1D-224ENST00000584672 EEA1Q15075 1411 aa23.74■■□□□ 1.39
CSNK1D-224ENST00000584672 ESF1Q9H501 851 aaKnown RBP23.69■■□□□ 1.38
CSNK1D-224ENST00000584672 REREQ9P2R6 1566 aa23.68■■□□□ 1.38
CSNK1D-224ENST00000584672 CDC42BPBQ9Y5S2 1711 aa23.67■■□□□ 1.38
CSNK1D-224ENST00000584672 CDK11AQ9UQ88 783 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-224ENST00000584672 TROQ12816 1431 aaPredicted RBP23.66■■□□□ 1.38
CSNK1D-224ENST00000584672 NCOA1Q15788 1441 aa23.65■■□□□ 1.38
CSNK1D-224ENST00000584672 FMN1Q68DA7 1419 aa23.65■■□□□ 1.38
CSNK1D-224ENST00000584672 LRRIQ1Q96JM4 1722 aa23.64■■□□□ 1.38
CSNK1D-224ENST00000584672 TRAPPC8Q9Y2L5 1435 aa23.64■■□□□ 1.37
CSNK1D-224ENST00000584672 CLIP1P30622 1438 aa23.62■■□□□ 1.37
CSNK1D-224ENST00000584672 CAMSAP1Q5T5Y3 1602 aa23.62■■□□□ 1.37
CSNK1D-224ENST00000584672 IQSEC2Q5JU85 1478 aa23.62■■□□□ 1.37
CSNK1D-224ENST00000584672 MLH3Q9UHC1 1453 aa23.62■■□□□ 1.37
CSNK1D-224ENST00000584672 ARHGAP35Q9NRY4 1499 aa23.61■■□□□ 1.37
CSNK1D-224ENST00000584672 ITSN2Q9NZM3 1697 aa23.6■■□□□ 1.37
CSNK1D-224ENST00000584672 AGLP35573 1532 aa23.6■■□□□ 1.37
CSNK1D-224ENST00000584672 ABCC1P33527 1531 aa23.59■■□□□ 1.37
CSNK1D-224ENST00000584672 UBTFP17480 764 aaKnown RBP23.59■■□□□ 1.37
CSNK1D-224ENST00000584672 PREX2Q70Z35 1606 aa23.59■■□□□ 1.37
CSNK1D-224ENST00000584672 KIDINS220Q9ULH0 1771 aa23.58■■□□□ 1.37
CSNK1D-224ENST00000584672 NCKAP5LQ9HCH0 1330 aa23.57■■□□□ 1.36
CSNK1D-224ENST00000584672 UBAP1LF5GYI3 381 aa23.56■■□□□ 1.36
CSNK1D-224ENST00000584672 ZNF335Q9H4Z2 1342 aaPredicted RBP23.56■■□□□ 1.36
CSNK1D-224ENST00000584672 CNTLNQ9NXG0 1405 aa23.54■■□□□ 1.36
CSNK1D-224ENST00000584672 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
CSNK1D-224ENST00000584672 SUPT6HQ7KZ85 1726 aaKnown RBP23.5■■□□□ 1.35
CSNK1D-224ENST00000584672 CDC42BPAQ5VT25 1732 aa23.49■■□□□ 1.35
CSNK1D-224ENST00000584672 NPATQ14207 1427 aa23.49■■□□□ 1.35
CSNK1D-224ENST00000584672 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
CSNK1D-224ENST00000584672 ZMYM3Q14202 1370 aa23.47■■□□□ 1.35
CSNK1D-224ENST00000584672 MYO3AQ8NEV4 1616 aa23.47■■□□□ 1.35
CSNK1D-224ENST00000584672 SAMD9LQ8IVG5 1584 aa23.46■■□□□ 1.35
CSNK1D-224ENST00000584672 ZNF777Q9ULD5 760 aaPredicted RBP23.46■■□□□ 1.35
CSNK1D-224ENST00000584672 ZNF142P52746 1687 aaPredicted RBP23.44■■□□□ 1.34
CSNK1D-224ENST00000584672 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
CSNK1D-224ENST00000584672 CEP170BQ9Y4F5 1589 aaPredicted RBP23.42■■□□□ 1.34
CSNK1D-224ENST00000584672 SYCP2Q9BX26 1530 aa23.42■■□□□ 1.34
CSNK1D-224ENST00000584672 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
CSNK1D-224ENST00000584672 PLA2R1Q13018 1463 aa23.38■■□□□ 1.33
CSNK1D-224ENST00000584672 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
CSNK1D-224ENST00000584672 MED1Q15648 1581 aaPredicted RBP23.37■■□□□ 1.33
CSNK1D-224ENST00000584672 HNRNPMP52272 730 aaKnown RBP eCLIP23.37■■□□□ 1.331e-6■■■□□ 18.3
CSNK1D-224ENST00000584672 TCOF1Q13428 1488 aaKnown RBP23.36■■□□□ 1.33
CSNK1D-224ENST00000584672 PTPRKQ15262 1439 aa23.36■■□□□ 1.33
CSNK1D-224ENST00000584672 PIP4K2BP78356 416 aa23.36■■□□□ 1.33
CSNK1D-224ENST00000584672 PKD2Q13563 968 aa23.36■■□□□ 1.33
CSNK1D-224ENST00000584672 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
CSNK1D-224ENST00000584672 ATP7AQ04656 1500 aa23.36■■□□□ 1.33
CSNK1D-224ENST00000584672 HSPA1LP34931 641 aa23.35■■□□□ 1.33
CSNK1D-224ENST00000584672 CASKIN1Q8WXD9 1431 aa23.34■■□□□ 1.33
CSNK1D-224ENST00000584672 GGT6Q6P531 493 aa23.34■■□□□ 1.33
CSNK1D-224ENST00000584672 PLXNC1O60486 1568 aa23.33■■□□□ 1.33
CSNK1D-224ENST00000584672 INO80Q9ULG1 1556 aaPredicted RBP23.32■■□□□ 1.32
CSNK1D-224ENST00000584672 A2MP01023 1474 aa23.31■■□□□ 1.32
CSNK1D-224ENST00000584672 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
CSNK1D-224ENST00000584672 DNMT1P26358 1616 aaKnown RBP23.27■■□□□ 1.32
CSNK1D-224ENST00000584672 POLR1AO95602 1720 aaPredicted RBP23.27■■□□□ 1.32
CSNK1D-224ENST00000584672 A2ML1A8K2U0 1454 aa23.25■■□□□ 1.31
CSNK1D-224ENST00000584672 FYCO1Q9BQS8 1478 aa23.23■■□□□ 1.31
CSNK1D-224ENST00000584672 NEURL4Q96JN8 1562 aa23.23■■□□□ 1.31
CSNK1D-224ENST00000584672 ADGBQ8N7X0 1667 aa23.22■■□□□ 1.31
CSNK1D-224ENST00000584672 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
CSNK1D-224ENST00000584672 TOM1O60784 492 aa23.21■■□□□ 1.31
CSNK1D-224ENST00000584672 CFDP1Q9UEE9 299 aaPredicted RBP23.21■■□□□ 1.31
CSNK1D-224ENST00000584672 CPS1P31327 1500 aa23.2■■□□□ 1.3
CSNK1D-224ENST00000584672 SHANK2Q9UPX8 1470 aa23.2■■□□□ 1.3
CSNK1D-224ENST00000584672 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
CSNK1D-224ENST00000584672 PLEKHH2Q8IVE3 1493 aa23.19■■□□□ 1.3
CSNK1D-224ENST00000584672 KIAA1107Q9UPP5 1409 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms