RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
RFFL-212ENST00000584655 ABCA5Q8WWZ7 1642 aa14.38□□□□□ -0.11
RFFL-212ENST00000584655 NBPF8Q3BBV2 869 aa14.38□□□□□ -0.11
RFFL-212ENST00000584655 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
RFFL-212ENST00000584655 DNAJC5Q9H3Z4 198 aa14.37□□□□□ -0.11
RFFL-212ENST00000584655 CUL7Q14999 1698 aa14.36□□□□□ -0.11
RFFL-212ENST00000584655 KIF3BO15066 747 aa14.36□□□□□ -0.11
RFFL-212ENST00000584655 HNRNPUQ00839 825 aaKnown RBP eCLIP14.36□□□□□ -0.11
RFFL-212ENST00000584655 EIF4G2P78344 907 aaKnown RBP eCLIP14.35□□□□□ -0.11
RFFL-212ENST00000584655 NAIPQ13075 1403 aa14.35□□□□□ -0.11
RFFL-212ENST00000584655 NUP153P49790 1475 aaKnown RBP14.35□□□□□ -0.11
RFFL-212ENST00000584655 SAFB2Q14151 953 aaKnown RBP eCLIP14.35□□□□□ -0.11
RFFL-212ENST00000584655 DISP1Q96F81 1524 aa14.35□□□□□ -0.11
RFFL-212ENST00000584655 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
RFFL-212ENST00000584655 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.11
RFFL-212ENST00000584655 C11orf95C9JLR9 678 aaPredicted RBP14.33□□□□□ -0.12
RFFL-212ENST00000584655 ADAMTS12P58397 1594 aa14.33□□□□□ -0.12
RFFL-212ENST00000584655 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
RFFL-212ENST00000584655 EFCAB5A4FU69 1503 aa14.32□□□□□ -0.12
RFFL-212ENST00000584655 PLEKHG5O94827 1062 aa14.31□□□□□ -0.12
RFFL-212ENST00000584655 WDR62O43379 1518 aa14.3□□□□□ -0.12
RFFL-212ENST00000584655 CCDC184Q52MB2 194 aa14.3□□□□□ -0.12
RFFL-212ENST00000584655 CEP170Q5SW79 1584 aa14.29□□□□□ -0.12
RFFL-212ENST00000584655 ERCC6L2Q5T890 1561 aa14.29□□□□□ -0.12
RFFL-212ENST00000584655 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
RFFL-212ENST00000584655 CTTNBP2Q8WZ74 1663 aa14.28□□□□□ -0.12
RFFL-212ENST00000584655 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
RFFL-212ENST00000584655 MAPKBP1O60336 1514 aa14.27□□□□□ -0.13
RFFL-212ENST00000584655 ABCC5O15440 1437 aa14.27□□□□□ -0.13
RFFL-212ENST00000584655 NBPF1Q3BBV0 1214 aa14.27□□□□□ -0.13
RFFL-212ENST00000584655 MRS2Q9HD23 443 aa14.27□□□□□ -0.13
RFFL-212ENST00000584655 ATP10BO94823 1461 aa14.27□□□□□ -0.13
RFFL-212ENST00000584655 TROQ12816 1431 aaPredicted RBP14.26□□□□□ -0.13
RFFL-212ENST00000584655 KIF15Q9NS87 1388 aa14.25□□□□□ -0.13
RFFL-212ENST00000584655 FKBP8Q14318 412 aa14.25□□□□□ -0.13
RFFL-212ENST00000584655 CLSPNQ9HAW4 1339 aa14.25□□□□□ -0.13
RFFL-212ENST00000584655 TNNT2P45379 298 aaPredicted RBP14.25□□□□□ -0.13
RFFL-212ENST00000584655 SPAG9O60271 1321 aaKnown RBP14.25□□□□□ -0.13
RFFL-212ENST00000584655 ANKRD30AQ9BXX3 1397 aa14.25□□□□□ -0.13
RFFL-212ENST00000584655 ST20-MTHFSA0A0A6YYL1 179 aa14.25□□□□□ -0.13
RFFL-212ENST00000584655 MAGI1Q96QZ7 1491 aaPredicted RBP14.24□□□□□ -0.13
RFFL-212ENST00000584655 CC2D1BQ5T0F9 858 aaKnown RBP14.24□□□□□ -0.13
RFFL-212ENST00000584655 DAPK1P53355 1430 aa14.23□□□□□ -0.13
RFFL-212ENST00000584655 HFM1A2PYH4 1435 aa14.22□□□□□ -0.13
RFFL-212ENST00000584655 PTPN23Q9H3S7 1636 aa14.22□□□□□ -0.13
RFFL-212ENST00000584655 UACAQ9BZF9 1416 aa14.22□□□□□ -0.13
RFFL-212ENST00000584655 ANKRD50Q9ULJ7 1429 aa14.21□□□□□ -0.13
RFFL-212ENST00000584655 WASHC2AQ641Q2 1341 aa14.21□□□□□ -0.13
RFFL-212ENST00000584655 KDM6BO15054 1643 aa14.21□□□□□ -0.14
RFFL-212ENST00000584655 EHBP1L1Q8N3D4 1523 aa14.2□□□□□ -0.14
RFFL-212ENST00000584655 STK26Q9P289 416 aa14.2□□□□□ -0.14
RFFL-212ENST00000584655 ARID4BQ4LE39 1312 aaPredicted RBP14.2□□□□□ -0.14
RFFL-212ENST00000584655 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
RFFL-212ENST00000584655 HECW1Q76N89 1606 aa14.19□□□□□ -0.14
RFFL-212ENST00000584655 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
RFFL-212ENST00000584655 FAM69CQ0P6D2 419 aa14.19□□□□□ -0.14
RFFL-212ENST00000584655 SUPT6HQ7KZ85 1726 aaKnown RBP14.18□□□□□ -0.14
RFFL-212ENST00000584655 KIF14Q15058 1648 aa14.18□□□□□ -0.14
RFFL-212ENST00000584655 STAG3Q9UJ98 1225 aa14.18□□□□□ -0.14
RFFL-212ENST00000584655 ARHGAP5Q13017 1502 aa14.18□□□□□ -0.14
RFFL-212ENST00000584655 CAMSAP2Q08AD1 1489 aa14.17□□□□□ -0.14
RFFL-212ENST00000584655 SCAPERQ9BY12 1400 aa14.17□□□□□ -0.14
RFFL-212ENST00000584655 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
RFFL-212ENST00000584655 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
RFFL-212ENST00000584655 NEFLP07196 543 aa14.15□□□□□ -0.14
RFFL-212ENST00000584655 SAMD9Q5K651 1589 aa14.15□□□□□ -0.14
RFFL-212ENST00000584655 UGGT2Q9NYU1 1516 aa14.15□□□□□ -0.14
RFFL-212ENST00000584655 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
RFFL-212ENST00000584655 NUP160Q12769 1436 aa14.13□□□□□ -0.15
RFFL-212ENST00000584655 SUPT16HQ9Y5B9 1047 aaKnown RBP14.13□□□□□ -0.15
RFFL-212ENST00000584655 LRRIQ1Q96JM4 1722 aa14.13□□□□□ -0.15
RFFL-212ENST00000584655 RAPGEF6Q8TEU7 1601 aa14.13□□□□□ -0.15
RFFL-212ENST00000584655 NCOA1Q15788 1441 aa14.13□□□□□ -0.15
RFFL-212ENST00000584655 NUTM2FA1L443 756 aa14.12□□□□□ -0.15
RFFL-212ENST00000584655 BCL11AQ9H165 835 aa14.1□□□□□ -0.15
RFFL-212ENST00000584655 TRAK1Q9UPV9 953 aa14.1□□□□□ -0.15
RFFL-212ENST00000584655 KIF7Q2M1P5 1343 aa14.09□□□□□ -0.15
RFFL-212ENST00000584655 ROCK2O75116 1388 aaKnown RBP14.09□□□□□ -0.15
RFFL-212ENST00000584655 CFAP43Q8NDM7 1665 aa14.09□□□□□ -0.15
RFFL-212ENST00000584655 PLEKHH2Q8IVE3 1493 aa14.09□□□□□ -0.15
RFFL-212ENST00000584655 WASHC2CQ9Y4E1 1318 aa14.09□□□□□ -0.15
RFFL-212ENST00000584655 MAP3K1Q13233 1512 aa14.08□□□□□ -0.15
RFFL-212ENST00000584655 ANKRD30BQ9BXX2 1392 aa14.07□□□□□ -0.16
RFFL-212ENST00000584655 MIA2Q96PC5 1412 aa14.07□□□□□ -0.16
RFFL-212ENST00000584655 TRAPPC8Q9Y2L5 1435 aa14.06□□□□□ -0.16
RFFL-212ENST00000584655 CFAP70Q5T0N1 1121 aa14.06□□□□□ -0.16
RFFL-212ENST00000584655 USP47Q96K76 1375 aa14.05□□□□□ -0.16
RFFL-212ENST00000584655 NEUROD2Q15784 382 aa14.05□□□□□ -0.16
RFFL-212ENST00000584655 ESF1Q9H501 851 aaKnown RBP14.04□□□□□ -0.16
RFFL-212ENST00000584655 SOX12O15370 315 aa14.04□□□□□ -0.16
RFFL-212ENST00000584655 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.16
RFFL-212ENST00000584655 AKNAQ7Z591 1439 aa14.02□□□□□ -0.16
RFFL-212ENST00000584655 FBXO31Q5XUX0 539 aaPredicted RBP14.02□□□□□ -0.17
RFFL-212ENST00000584655 CHD1O14646 1710 aa14.02□□□□□ -0.17
RFFL-212ENST00000584655 SYCP2Q9BX26 1530 aa14.02□□□□□ -0.17
RFFL-212ENST00000584655 PPM1GO15355 546 aaPredicted RBP14□□□□□ -0.17
RFFL-212ENST00000584655 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
RFFL-212ENST00000584655 PRKRIP1Q9H875 184 aaPredicted RBP13.99□□□□□ -0.17
RFFL-212ENST00000584655 PANK3Q9H999 370 aa13.99□□□□□ -0.17
RFFL-212ENST00000584655 DENND4BO75064 1496 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms