RNA–Protein interactions for RNA: ENST00000583382.1

CDH8-209, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 1,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-209ENST00000583382 DCBLD2Q96PD2 775 aa8.91□□□□□ -0.98
CDH8-209ENST00000583382 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
CDH8-209ENST00000583382 WIZO95785 1651 aa8.9□□□□□ -0.98
CDH8-209ENST00000583382 POTEIP0CG38 1075 aa8.9□□□□□ -0.99
CDH8-209ENST00000583382 EFCAB3Q8N7B9 438 aa8.9□□□□□ -0.99
CDH8-209ENST00000583382 TRIM35Q9UPQ4 493 aa8.9□□□□□ -0.99
CDH8-209ENST00000583382 ABCC8Q09428 1581 aa8.87□□□□□ -0.99
CDH8-209ENST00000583382 PELP1Q8IZL8 1130 aaKnown RBP8.87□□□□□ -0.99
CDH8-209ENST00000583382 GOLGA2Q08379 1002 aa8.86□□□□□ -0.99
CDH8-209ENST00000583382 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.85□□□□□ -0.99
CDH8-209ENST00000583382 TOPBP1Q92547 1522 aa8.85□□□□□ -0.99
CDH8-209ENST00000583382 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
CDH8-209ENST00000583382 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
CDH8-209ENST00000583382 SYNJ1O43426 1573 aa8.83□□□□□ -1
CDH8-209ENST00000583382 AQRO60306 1485 aaKnown RBP eCLIP8.82□□□□□ -1
CDH8-209ENST00000583382 CLASP1Q7Z460 1538 aa8.82□□□□□ -1
CDH8-209ENST00000583382 SOX12O15370 315 aa8.82□□□□□ -1
CDH8-209ENST00000583382 PAXIP1Q6ZW49 1069 aaPredicted RBP8.82□□□□□ -1
CDH8-209ENST00000583382 PHF8Q9UPP1 1060 aa8.82□□□□□ -1
CDH8-209ENST00000583382 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
CDH8-209ENST00000583382 DNMBPQ6XZF7 1577 aa8.81□□□□□ -1
CDH8-209ENST00000583382 CFAP44Q96MT7 982 aa8.8□□□□□ -1
CDH8-209ENST00000583382 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
CDH8-209ENST00000583382 PLCB2Q00722 1185 aa8.8□□□□□ -1
CDH8-209ENST00000583382 SPRYD3Q8NCJ5 442 aa8.8□□□□□ -1
CDH8-209ENST00000583382 FBXO22Q8NEZ5 403 aa8.8□□□□□ -1
CDH8-209ENST00000583382 TOP2AP11388 1531 aaKnown RBP8.79□□□□□ -1
CDH8-209ENST00000583382 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
CDH8-209ENST00000583382 IER5LQ5T953 404 aa8.79□□□□□ -1
CDH8-209ENST00000583382 NLRP6P59044 892 aa8.78□□□□□ -1
CDH8-209ENST00000583382 IRX5P78411 483 aaPredicted RBP8.78□□□□□ -1
CDH8-209ENST00000583382 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -1
CDH8-209ENST00000583382 WDR97A6NE52 1622 aa8.78□□□□□ -1
CDH8-209ENST00000583382 SLC39A7Q92504 469 aa8.77□□□□□ -1.01
CDH8-209ENST00000583382 MS4A4AQ96JQ5 239 aa8.77□□□□□ -1.01
CDH8-209ENST00000583382 GAPVD1Q14C86 1478 aa8.77□□□□□ -1.01
CDH8-209ENST00000583382 CHMP7Q8WUX9 453 aaPredicted RBP8.76□□□□□ -1.01
CDH8-209ENST00000583382 C7P10643 843 aa8.75□□□□□ -1.01
CDH8-209ENST00000583382 RYDENQ9NUL5 291 aaKnown RBP8.75□□□□□ -1.01
CDH8-209ENST00000583382 METRNQ9UJH8 293 aa8.75□□□□□ -1.01
CDH8-209ENST00000583382 COLQQ9Y215 455 aaPredicted RBP8.75□□□□□ -1.01
CDH8-209ENST00000583382 PDCD7Q8N8D1 485 aaKnown RBP8.75□□□□□ -1.01
CDH8-209ENST00000583382 MAGI1Q96QZ7 1491 aaPredicted RBP8.74□□□□□ -1.01
CDH8-209ENST00000583382 SNAPC4Q5SXM2 1469 aa8.74□□□□□ -1.01
CDH8-209ENST00000583382 POTEFA5A3E0 1075 aa8.74□□□□□ -1.01
CDH8-209ENST00000583382 DPY19L2Q6NUT2 758 aa8.74□□□□□ -1.01
CDH8-209ENST00000583382 OCEL1Q9H607 264 aa8.74□□□□□ -1.01
CDH8-209ENST00000583382 PPP1R37O75864 691 aa8.73□□□□□ -1.01
CDH8-209ENST00000583382 KIF13AQ9H1H9 1805 aa8.73□□□□□ -1.01
CDH8-209ENST00000583382 SEC24BO95487 1268 aa8.72□□□□□ -1.01
CDH8-209ENST00000583382 POLA1P09884 1462 aaPredicted RBP8.72□□□□□ -1.01
CDH8-209ENST00000583382 PLCG2P16885 1265 aa8.71□□□□□ -1.01
CDH8-209ENST00000583382 TDRD9Q8NDG6 1382 aaKnown RBP8.71□□□□□ -1.02
CDH8-209ENST00000583382 SYNJ2O15056 1496 aa8.7□□□□□ -1.02
CDH8-209ENST00000583382 SLC24A1O60721 1099 aa8.7□□□□□ -1.02
CDH8-209ENST00000583382 GRIN2BQ13224 1484 aa8.68□□□□□ -1.02
CDH8-209ENST00000583382 SOGA1O94964 1423 aa8.68□□□□□ -1.02
CDH8-209ENST00000583382 TSHZ2Q9NRE2 1034 aa8.67□□□□□ -1.02
CDH8-209ENST00000583382 HAP1P54257 671 aaPredicted RBP8.66□□□□□ -1.02
CDH8-209ENST00000583382 RAD54L2Q9Y4B4 1467 aa8.66□□□□□ -1.02
CDH8-209ENST00000583382 ERCC6L2Q5T890 1561 aa8.66□□□□□ -1.02
CDH8-209ENST00000583382 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.02
CDH8-209ENST00000583382 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
CDH8-209ENST00000583382 KDM6BO15054 1643 aa8.64□□□□□ -1.03
CDH8-209ENST00000583382 FAM69CQ0P6D2 419 aa8.63□□□□□ -1.03
CDH8-209ENST00000583382 MICALL2Q8IY33 904 aa8.63□□□□□ -1.03
CDH8-209ENST00000583382 BOLA1Q9Y3E2 137 aa8.63□□□□□ -1.03
CDH8-209ENST00000583382 POTEB2H3BUK9 544 aa8.62□□□□□ -1.03
CDH8-209ENST00000583382 FBXO41Q8TF61 875 aa8.62□□□□□ -1.03
CDH8-209ENST00000583382 L3MBTL3Q96JM7 780 aaPredicted RBP8.61□□□□□ -1.03
CDH8-209ENST00000583382 CADPS2Q86UW7 1296 aa8.6□□□□□ -1.03
CDH8-209ENST00000583382 TMEM121BQ9BXQ6 578 aaPredicted RBP8.6□□□□□ -1.03
CDH8-209ENST00000583382 FGD5Q6ZNL6 1462 aa8.6□□□□□ -1.03
CDH8-209ENST00000583382 CEP170Q5SW79 1584 aa8.6□□□□□ -1.03
CDH8-209ENST00000583382 POTEJP0CG39 1038 aa8.59□□□□□ -1.03
CDH8-209ENST00000583382 ABCC10Q5T3U5 1492 aa8.59□□□□□ -1.03
CDH8-209ENST00000583382 G3V3G9 751 aa8.59□□□□□ -1.03
CDH8-209ENST00000583382 SHROOM2Q13796 1616 aa8.57□□□□□ -1.04
CDH8-209ENST00000583382 HECW2Q9P2P5 1572 aa8.57□□□□□ -1.04
CDH8-209ENST00000583382 MAPKBP1O60336 1514 aa8.56□□□□□ -1.04
CDH8-209ENST00000583382 DIP2BQ9P265 1576 aa8.56□□□□□ -1.04
CDH8-209ENST00000583382 TSPOAP1O95153 1857 aa8.56□□□□□ -1.04
CDH8-209ENST00000583382 GRIN2AQ12879 1464 aa8.55□□□□□ -1.04
CDH8-209ENST00000583382 KDM2AQ9Y2K7 1162 aa8.54□□□□□ -1.04
CDH8-209ENST00000583382 ADGRL1O94910 1474 aa8.54□□□□□ -1.04
CDH8-209ENST00000583382 LMTK3Q96Q04 1460 aa8.54□□□□□ -1.04
CDH8-209ENST00000583382 ABCA5Q8WWZ7 1642 aa8.53□□□□□ -1.04
CDH8-209ENST00000583382 NUP160Q12769 1436 aa8.53□□□□□ -1.04
CDH8-209ENST00000583382 C3orf67Q6ZVT6 689 aa8.53□□□□□ -1.04
CDH8-209ENST00000583382 NCKAP5LQ9HCH0 1330 aa8.53□□□□□ -1.04
CDH8-209ENST00000583382 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.05
CDH8-209ENST00000583382 VSIG10Q8N0Z9 540 aa8.52□□□□□ -1.05
CDH8-209ENST00000583382 CRISPLD2Q9H0B8 497 aa8.51□□□□□ -1.05
CDH8-209ENST00000583382 CUX1P39880 1505 aa8.5□□□□□ -1.05
CDH8-209ENST00000583382 ABCA10Q8WWZ4 1543 aa8.5□□□□□ -1.05
CDH8-209ENST00000583382 SOCS7O14512 581 aa8.49□□□□□ -1.05
CDH8-209ENST00000583382 LHX8Q68G74 356 aa8.49□□□□□ -1.05
CDH8-209ENST00000583382 ILDR2Q71H61 639 aa8.49□□□□□ -1.05
CDH8-209ENST00000583382 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
CDH8-209ENST00000583382 ADAMTS12P58397 1594 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms