RNA–Protein interactions for RNA: ENST00000583217.1

EIF4A1-227, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-227ENST00000583217 ARHGEF12Q9NZN5 1544 aa15.75■□□□□ 0.11
EIF4A1-227ENST00000583217 PLCH2O75038 1416 aa15.74■□□□□ 0.11
EIF4A1-227ENST00000583217 CFAP74Q9C0B2 1584 aa15.74■□□□□ 0.11
EIF4A1-227ENST00000583217 CDK13Q14004 1512 aaKnown RBP15.73■□□□□ 0.11
EIF4A1-227ENST00000583217 ATP10AO60312 1499 aa15.72■□□□□ 0.11
EIF4A1-227ENST00000583217 FER1L4A9Z1Z3 1794 aa15.72■□□□□ 0.11
EIF4A1-227ENST00000583217 STRCQ7RTU9 1775 aa15.7■□□□□ 0.1
EIF4A1-227ENST00000583217 SOCS7O14512 581 aa15.7■□□□□ 0.1
EIF4A1-227ENST00000583217 DISP3Q9P2K9 1392 aa15.7■□□□□ 0.1
EIF4A1-227ENST00000583217 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
EIF4A1-227ENST00000583217 PREX1Q8TCU6 1659 aa15.67■□□□□ 0.1
EIF4A1-227ENST00000583217 AFAP1Q8N556 730 aa15.66■□□□□ 0.1
EIF4A1-227ENST00000583217 EFCAB2Q5VUJ9 269 aa15.65■□□□□ 0.1
EIF4A1-227ENST00000583217 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
EIF4A1-227ENST00000583217 EEA1Q15075 1411 aa15.62■□□□□ 0.09
EIF4A1-227ENST00000583217 PTPRTO14522 1441 aa15.6■□□□□ 0.09
EIF4A1-227ENST00000583217 UHRF1BP1Q6BDS2 1440 aa15.6■□□□□ 0.09
EIF4A1-227ENST00000583217 KDM5CP41229 1560 aa15.6■□□□□ 0.09
EIF4A1-227ENST00000583217 KIF14Q15058 1648 aa15.6■□□□□ 0.09
EIF4A1-227ENST00000583217 LTBP4Q8N2S1 1624 aa15.6■□□□□ 0.09
EIF4A1-227ENST00000583217 SETD1BQ9UPS6 1966 aaKnown RBP15.6■□□□□ 0.09
EIF4A1-227ENST00000583217 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
EIF4A1-227ENST00000583217 DIP2CQ9Y2E4 1556 aa15.58■□□□□ 0.09
EIF4A1-227ENST00000583217 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
EIF4A1-227ENST00000583217 MYO5CQ9NQX4 1742 aa15.56■□□□□ 0.08
EIF4A1-227ENST00000583217 REREQ9P2R6 1566 aa15.55■□□□□ 0.08
EIF4A1-227ENST00000583217 ARHGAP35Q9NRY4 1499 aa15.55■□□□□ 0.08
EIF4A1-227ENST00000583217 MLH3Q9UHC1 1453 aa15.55■□□□□ 0.08
EIF4A1-227ENST00000583217 TROQ12816 1431 aaPredicted RBP15.55■□□□□ 0.08
EIF4A1-227ENST00000583217 C3P01024 1663 aa15.54■□□□□ 0.08
EIF4A1-227ENST00000583217 TRAPPC8Q9Y2L5 1435 aa15.54■□□□□ 0.08
EIF4A1-227ENST00000583217 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
EIF4A1-227ENST00000583217 SPATA31D1Q6ZQQ2 1576 aa15.53■□□□□ 0.08
EIF4A1-227ENST00000583217 AGLP35573 1532 aa15.53■□□□□ 0.08
EIF4A1-227ENST00000583217 ARHGAP5Q13017 1502 aa15.53■□□□□ 0.08
EIF4A1-227ENST00000583217 NCOA1Q15788 1441 aa15.52■□□□□ 0.08
EIF4A1-227ENST00000583217 FMN1Q68DA7 1419 aa15.52■□□□□ 0.08
EIF4A1-227ENST00000583217 CDK11AQ9UQ88 783 aaPredicted RBP15.52■□□□□ 0.08
EIF4A1-227ENST00000583217 EHMT2Q96KQ7 1210 aa15.5■□□□□ 0.07
EIF4A1-227ENST00000583217 MYT1LQ9UL68 1186 aa15.49■□□□□ 0.07
EIF4A1-227ENST00000583217 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
EIF4A1-227ENST00000583217 IQSEC2Q5JU85 1478 aa15.48■□□□□ 0.07
EIF4A1-227ENST00000583217 LRRIQ1Q96JM4 1722 aa15.48■□□□□ 0.07
EIF4A1-227ENST00000583217 ABCC1P33527 1531 aa15.47■□□□□ 0.07
EIF4A1-227ENST00000583217 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.07
EIF4A1-227ENST00000583217 KIDINS220Q9ULH0 1771 aa15.46■□□□□ 0.07
EIF4A1-227ENST00000583217 ZNF335Q9H4Z2 1342 aaPredicted RBP15.45■□□□□ 0.06
EIF4A1-227ENST00000583217 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
EIF4A1-227ENST00000583217 CLIP1P30622 1438 aa15.44■□□□□ 0.06
EIF4A1-227ENST00000583217 CNTLNQ9NXG0 1405 aa15.44■□□□□ 0.06
EIF4A1-227ENST00000583217 ZMYM3Q14202 1370 aa15.44■□□□□ 0.06
EIF4A1-227ENST00000583217 NPATQ14207 1427 aa15.43■□□□□ 0.06
EIF4A1-227ENST00000583217 CAMSAP1Q5T5Y3 1602 aa15.43■□□□□ 0.06
EIF4A1-227ENST00000583217 ESF1Q9H501 851 aaKnown RBP15.43■□□□□ 0.06
EIF4A1-227ENST00000583217 PREX2Q70Z35 1606 aa15.42■□□□□ 0.06
EIF4A1-227ENST00000583217 ITSN2Q9NZM3 1697 aa15.41■□□□□ 0.06
EIF4A1-227ENST00000583217 SAMD9LQ8IVG5 1584 aa15.4■□□□□ 0.06
EIF4A1-227ENST00000583217 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
EIF4A1-227ENST00000583217 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
EIF4A1-227ENST00000583217 CASKIN1Q8WXD9 1431 aa15.37■□□□□ 0.05
EIF4A1-227ENST00000583217 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
EIF4A1-227ENST00000583217 TCOF1Q13428 1488 aaKnown RBP15.37■□□□□ 0.05
EIF4A1-227ENST00000583217 MROH2AA6NES4 1674 aa15.36■□□□□ 0.05
EIF4A1-227ENST00000583217 PLA2R1Q13018 1463 aa15.35■□□□□ 0.05
EIF4A1-227ENST00000583217 CDC42BPAQ5VT25 1732 aa15.35■□□□□ 0.05
EIF4A1-227ENST00000583217 PKD2Q13563 968 aa15.35■□□□□ 0.05
EIF4A1-227ENST00000583217 SPAG9O60271 1321 aaKnown RBP15.35■□□□□ 0.05
EIF4A1-227ENST00000583217 GPATCH8Q9UKJ3 1502 aaKnown RBP15.34■□□□□ 0.05
EIF4A1-227ENST00000583217 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
EIF4A1-227ENST00000583217 SYCP2Q9BX26 1530 aa15.33■□□□□ 0.05
EIF4A1-227ENST00000583217 PLXNC1O60486 1568 aa15.33■□□□□ 0.05
EIF4A1-227ENST00000583217 CCDC18Q5T9S5 1454 aa15.33■□□□□ 0.04
EIF4A1-227ENST00000583217 HSPA1LP34931 641 aa15.31■□□□□ 0.04
EIF4A1-227ENST00000583217 CEP170BQ9Y4F5 1589 aaPredicted RBP15.31■□□□□ 0.04
EIF4A1-227ENST00000583217 MYO3AQ8NEV4 1616 aa15.31■□□□□ 0.04
EIF4A1-227ENST00000583217 ZNF142P52746 1687 aaPredicted RBP15.31■□□□□ 0.04
EIF4A1-227ENST00000583217 CLTCQ00610 1675 aaKnown RBP15.31■□□□□ 0.04
EIF4A1-227ENST00000583217 SUPT6HQ7KZ85 1726 aaKnown RBP15.31■□□□□ 0.04
EIF4A1-227ENST00000583217 A2MP01023 1474 aa15.3■□□□□ 0.04
EIF4A1-227ENST00000583217 KIAA1107Q9UPP5 1409 aa15.3■□□□□ 0.04
EIF4A1-227ENST00000583217 ATP7AQ04656 1500 aa15.29■□□□□ 0.04
EIF4A1-227ENST00000583217 GGT6Q6P531 493 aa15.29■□□□□ 0.04
EIF4A1-227ENST00000583217 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
EIF4A1-227ENST00000583217 INO80Q9ULG1 1556 aaPredicted RBP15.28■□□□□ 0.04
EIF4A1-227ENST00000583217 ZNF644Q9H582 1327 aaPredicted RBP15.25■□□□□ 0.03
EIF4A1-227ENST00000583217 CHIC1Q5VXU3 224 aa15.25■□□□□ 0.03
EIF4A1-227ENST00000583217 CFDP1Q9UEE9 299 aaPredicted RBP15.25■□□□□ 0.03
EIF4A1-227ENST00000583217 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
EIF4A1-227ENST00000583217 DNMT1P26358 1616 aaKnown RBP15.25■□□□□ 0.03
EIF4A1-227ENST00000583217 MED1Q15648 1581 aaPredicted RBP15.24■□□□□ 0.03
EIF4A1-227ENST00000583217 PIP4K2BP78356 416 aa15.24■□□□□ 0.03
EIF4A1-227ENST00000583217 FBXO31Q5XUX0 539 aaPredicted RBP15.24■□□□□ 0.03
EIF4A1-227ENST00000583217 FYCO1Q9BQS8 1478 aa15.24■□□□□ 0.03
EIF4A1-227ENST00000583217 NEURL4Q96JN8 1562 aa15.24■□□□□ 0.03
EIF4A1-227ENST00000583217 ALKQ9UM73 1620 aa15.23■□□□□ 0.03
EIF4A1-227ENST00000583217 PLEKHH2Q8IVE3 1493 aa15.22■□□□□ 0.03
EIF4A1-227ENST00000583217 MBD5Q9P267 1494 aa15.22■□□□□ 0.03
EIF4A1-227ENST00000583217 SHANK2Q9UPX8 1470 aa15.21■□□□□ 0.03
EIF4A1-227ENST00000583217 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
EIF4A1-227ENST00000583217 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms