RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 NEFMP07197 916 aa7.82□□□□□ -1.16
RTTN-209ENST00000583043 URB2Q14146 1524 aaKnown RBP7.82□□□□□ -1.16
RTTN-209ENST00000583043 RTL5Q5HYW3 569 aaPredicted RBP7.82□□□□□ -1.16
RTTN-209ENST00000583043 CFAP43Q8NDM7 1665 aa7.82□□□□□ -1.16
RTTN-209ENST00000583043 SYNJ2O15056 1496 aa7.82□□□□□ -1.16
RTTN-209ENST00000583043 EPRSP07814 1512 aaKnown RBP7.82□□□□□ -1.16
RTTN-209ENST00000583043 HSPA5P11021 654 aaKnown RBP7.81□□□□□ -1.16
RTTN-209ENST00000583043 ANP32AP39687 249 aaKnown RBP7.81□□□□□ -1.16
RTTN-209ENST00000583043 PPP4R2Q9NY27 417 aa7.81□□□□□ -1.16
RTTN-209ENST00000583043 NUP155O75694 1391 aa7.81□□□□□ -1.16
RTTN-209ENST00000583043 EIF3AQ14152 1382 aaKnown RBP7.81□□□□□ -1.16
RTTN-209ENST00000583043 NESP48681 1621 aa7.8□□□□□ -1.16
RTTN-209ENST00000583043 NGEFQ8N5V2 710 aa7.8□□□□□ -1.16
RTTN-209ENST00000583043 EIF5BO60841 1220 aaKnown RBP7.8□□□□□ -1.16
RTTN-209ENST00000583043 TMF1P82094 1093 aa7.8□□□□□ -1.16
RTTN-209ENST00000583043 PDE3BQ13370 1112 aa7.8□□□□□ -1.16
RTTN-209ENST00000583043 TCOF1Q13428 1488 aaKnown RBP7.8□□□□□ -1.16
RTTN-209ENST00000583043 PKD2Q13563 968 aa7.8□□□□□ -1.16
RTTN-209ENST00000583043 UGGT2Q9NYU1 1516 aa7.79□□□□□ -1.16
RTTN-209ENST00000583043 CTTNBP2Q8WZ74 1663 aa7.79□□□□□ -1.16
RTTN-209ENST00000583043 WDR43Q15061 677 aaKnown RBP eCLIP7.79□□□□□ -1.16
RTTN-209ENST00000583043 NAIPQ13075 1403 aa7.78□□□□□ -1.16
RTTN-209ENST00000583043 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
RTTN-209ENST00000583043 WASHC2CQ9Y4E1 1318 aa7.78□□□□□ -1.16
RTTN-209ENST00000583043 L3MBTL2Q969R5 705 aa7.78□□□□□ -1.16
RTTN-209ENST00000583043 GRIN2AQ12879 1464 aa7.78□□□□□ -1.16
RTTN-209ENST00000583043 FAM9BQ8IZU0 186 aa7.77□□□□□ -1.16
RTTN-209ENST00000583043 SUPT16HQ9Y5B9 1047 aaKnown RBP7.77□□□□□ -1.17
RTTN-209ENST00000583043 ANKRD50Q9ULJ7 1429 aa7.77□□□□□ -1.17
RTTN-209ENST00000583043 DAPK1P53355 1430 aa7.77□□□□□ -1.17
RTTN-209ENST00000583043 KIF15Q9NS87 1388 aa7.77□□□□□ -1.17
RTTN-209ENST00000583043 KNSTRNQ9Y448 316 aa7.76□□□□□ -1.17
RTTN-209ENST00000583043 SNAPC4Q5SXM2 1469 aa7.76□□□□□ -1.17
RTTN-209ENST00000583043 CCDC144AA2RUR9 1427 aa7.76□□□□□ -1.17
RTTN-209ENST00000583043 PTPN23Q9H3S7 1636 aa7.76□□□□□ -1.17
RTTN-209ENST00000583043 KIAA1107Q9UPP5 1409 aa7.76□□□□□ -1.17
RTTN-209ENST00000583043 CNTLNQ9NXG0 1405 aa7.75□□□□□ -1.17
RTTN-209ENST00000583043 CCDC136Q96JN2 1154 aa7.75□□□□□ -1.17
RTTN-209ENST00000583043 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
RTTN-209ENST00000583043 CFAP53Q96M91 514 aa7.75□□□□□ -1.17
RTTN-209ENST00000583043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.75□□□□□ -1.17
RTTN-209ENST00000583043 ADAMTS12P58397 1594 aa7.74□□□□□ -1.17
RTTN-209ENST00000583043 SAMD9Q5K651 1589 aa7.74□□□□□ -1.17
RTTN-209ENST00000583043 MS4A1P11836 297 aa7.74□□□□□ -1.17
RTTN-209ENST00000583043 BCANQ96GW7 911 aa7.74□□□□□ -1.17
RTTN-209ENST00000583043 PNNQ9H307 717 aaKnown RBP7.73□□□□□ -1.17
RTTN-209ENST00000583043 CHMP4BQ9H444 224 aaKnown RBP7.73□□□□□ -1.17
RTTN-209ENST00000583043 ZBED9Q6R2W3 1325 aa7.73□□□□□ -1.17
RTTN-209ENST00000583043 KDM2AQ9Y2K7 1162 aa7.73□□□□□ -1.17
RTTN-209ENST00000583043 CCDC7Q96M83 1385 aa7.73□□□□□ -1.17
RTTN-209ENST00000583043 SCAPERQ9BY12 1400 aa7.73□□□□□ -1.17
RTTN-209ENST00000583043 NLRP13Q86W25 1043 aa7.73□□□□□ -1.17
RTTN-209ENST00000583043 ESF1Q9H501 851 aaKnown RBP7.72□□□□□ -1.17
RTTN-209ENST00000583043 DCAF11Q8TEB1 546 aa7.72□□□□□ -1.17
RTTN-209ENST00000583043 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
RTTN-209ENST00000583043 CANXP27824 592 aaKnown RBP7.72□□□□□ -1.17
RTTN-209ENST00000583043 SPAG9O60271 1321 aaKnown RBP7.72□□□□□ -1.17
RTTN-209ENST00000583043 WDR62O43379 1518 aa7.72□□□□□ -1.17
RTTN-209ENST00000583043 SHANK2Q9UPX8 1470 aa7.72□□□□□ -1.17
RTTN-209ENST00000583043 MYBBP1AQ9BQG0 1328 aaKnown RBP7.71□□□□□ -1.18
RTTN-209ENST00000583043 KCNH8Q96L42 1107 aa7.71□□□□□ -1.18
RTTN-209ENST00000583043 USP47Q96K76 1375 aa7.71□□□□□ -1.18
RTTN-209ENST00000583043 HDGFP51858 240 aaKnown RBP7.71□□□□□ -1.18
RTTN-209ENST00000583043 PRKRIP1Q9H875 184 aaPredicted RBP7.71□□□□□ -1.18
RTTN-209ENST00000583043 C9orf84Q5VXU9 1444 aa7.7□□□□□ -1.18
RTTN-209ENST00000583043 ITSN2Q9NZM3 1697 aa7.7□□□□□ -1.18
RTTN-209ENST00000583043 KIF14Q15058 1648 aa7.7□□□□□ -1.18
RTTN-209ENST00000583043 ZBTB47Q9UFB7 747 aaPredicted RBP7.7□□□□□ -1.18
RTTN-209ENST00000583043 PRG4Q92954 1404 aaPredicted RBP7.7□□□□□ -1.18
RTTN-209ENST00000583043 UPF2Q9HAU5 1272 aaKnown RBP7.69□□□□□ -1.18
RTTN-209ENST00000583043 CCDC141Q6ZP82 1450 aa7.69□□□□□ -1.18
RTTN-209ENST00000583043 NUDCQ9Y266 331 aa7.69□□□□□ -1.18
RTTN-209ENST00000583043 ANKRD30BQ9BXX2 1392 aa7.69□□□□□ -1.18
RTTN-209ENST00000583043 RPRD2Q5VT52 1461 aaKnown RBP7.69□□□□□ -1.18
RTTN-209ENST00000583043 BRD4O60885 1362 aaPredicted RBP7.69□□□□□ -1.18
RTTN-209ENST00000583043 ABCC5O15440 1437 aa7.68□□□□□ -1.18
RTTN-209ENST00000583043 RAPGEF6Q8TEU7 1601 aa7.68□□□□□ -1.18
RTTN-209ENST00000583043 MAPKBP1O60336 1514 aa7.68□□□□□ -1.18
RTTN-209ENST00000583043 CAMSAP2Q08AD1 1489 aa7.68□□□□□ -1.18
RTTN-209ENST00000583043 KIAA0556O60303 1618 aa7.67□□□□□ -1.18
RTTN-209ENST00000583043 HAP1P54257 671 aaPredicted RBP7.67□□□□□ -1.18
RTTN-209ENST00000583043 AAMPQ13685 434 aa7.67□□□□□ -1.18
RTTN-209ENST00000583043 STAG3Q9UJ98 1225 aa7.67□□□□□ -1.18
RTTN-209ENST00000583043 NCOA1Q15788 1441 aa7.67□□□□□ -1.18
RTTN-209ENST00000583043 NUP160Q12769 1436 aa7.66□□□□□ -1.18
RTTN-209ENST00000583043 HIRIP3Q9BW71 556 aaPredicted RBP7.66□□□□□ -1.18
RTTN-209ENST00000583043 ADGRL2O95490 1459 aa7.66□□□□□ -1.18
RTTN-209ENST00000583043 CFAP44Q96MT7 982 aa7.66□□□□□ -1.18
RTTN-209ENST00000583043 ANP32EQ9BTT0 268 aa7.66□□□□□ -1.18
RTTN-209ENST00000583043 HNRNPMP52272 730 aaKnown RBP eCLIP7.65□□□□□ -1.18
RTTN-209ENST00000583043 CHGAP10645 457 aaKnown RBP7.65□□□□□ -1.18
RTTN-209ENST00000583043 RGL3Q3MIN7 710 aa7.65□□□□□ -1.18
RTTN-209ENST00000583043 ARHGEF12Q9NZN5 1544 aa7.65□□□□□ -1.19
RTTN-209ENST00000583043 CNGB1Q14028 1251 aaPredicted RBP7.64□□□□□ -1.19
RTTN-209ENST00000583043 ARHGAP5Q13017 1502 aa7.64□□□□□ -1.19
RTTN-209ENST00000583043 CDK13Q14004 1512 aaKnown RBP7.64□□□□□ -1.19
RTTN-209ENST00000583043 TCERG1O14776 1098 aaKnown RBP7.64□□□□□ -1.19
RTTN-209ENST00000583043 PPM1GO15355 546 aaPredicted RBP7.64□□□□□ -1.19
RTTN-209ENST00000583043 KIF7Q2M1P5 1343 aa7.64□□□□□ -1.19
RTTN-209ENST00000583043 TARBP1Q13395 1621 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms