RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 TCOF1Q13428 1488 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-225ENST00000582482 ABCC5O15440 1437 aa15.21■□□□□ 0.03
CDK5RAP3-225ENST00000582482 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.02
CDK5RAP3-225ENST00000582482 DAPK1P53355 1430 aa15.2■□□□□ 0.02
CDK5RAP3-225ENST00000582482 L3MBTL2Q969R5 705 aa15.19■□□□□ 0.02
CDK5RAP3-225ENST00000582482 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
CDK5RAP3-225ENST00000582482 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-225ENST00000582482 BCANQ96GW7 911 aa15.18■□□□□ 0.02
CDK5RAP3-225ENST00000582482 GCC2Q8IWJ2 1684 aa15.18■□□□□ 0.02
CDK5RAP3-225ENST00000582482 HSPA5P11021 654 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-225ENST00000582482 C11orf95C9JLR9 678 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-225ENST00000582482 NBPF8Q3BBV2 869 aa15.16■□□□□ 0.02
CDK5RAP3-225ENST00000582482 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-225ENST00000582482 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-225ENST00000582482 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-225ENST00000582482 MIA2Q96PC5 1412 aa15.14■□□□□ 0.01
CDK5RAP3-225ENST00000582482 SUPT16HQ9Y5B9 1047 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-225ENST00000582482 CAMSAP2Q08AD1 1489 aa15.13■□□□□ 0.01
CDK5RAP3-225ENST00000582482 KCNA4P22459 653 aa15.12■□□□□ 0.01
CDK5RAP3-225ENST00000582482 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
CDK5RAP3-225ENST00000582482 TROQ12816 1431 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-225ENST00000582482 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
CDK5RAP3-225ENST00000582482 GPATCH8Q9UKJ3 1502 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-225ENST00000582482 CDK11AQ9UQ88 783 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-225ENST00000582482 DNMT1P26358 1616 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-225ENST00000582482 SENP3-EIF4A1A0A087X0R7 540 aa15.1■□□□□ 0.01
CDK5RAP3-225ENST00000582482 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDK5RAP3-225ENST00000582482 NUP160Q12769 1436 aa15.1■□□□□ 0.01
CDK5RAP3-225ENST00000582482 ANP32CO43423 234 aa15.09■□□□□ 0.01
CDK5RAP3-225ENST00000582482 CCDC184Q52MB2 194 aa15.09■□□□□ 0.01
CDK5RAP3-225ENST00000582482 ATP10BO94823 1461 aa15.07■□□□□ 0
CDK5RAP3-225ENST00000582482 POLR3GLQ9BT43 218 aa15.07■□□□□ 0
CDK5RAP3-225ENST00000582482 CARMIL2Q6F5E8 1435 aa15.06■□□□□ 0
CDK5RAP3-225ENST00000582482 ANKRD30BQ9BXX2 1392 aa15.06■□□□□ 0
CDK5RAP3-225ENST00000582482 ERCC6L2Q5T890 1561 aa15.06■□□□□ 0
CDK5RAP3-225ENST00000582482 AKNAQ7Z591 1439 aa15.06■□□□□ 0
CDK5RAP3-225ENST00000582482 PLEKHD1A6NEE1 506 aa15.06■□□□□ 0
CDK5RAP3-225ENST00000582482 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-225ENST00000582482 PKD2Q13563 968 aa15.04■□□□□ -0
CDK5RAP3-225ENST00000582482 PZPP20742 1482 aa15.04■□□□□ -0
CDK5RAP3-225ENST00000582482 NCOA1Q15788 1441 aa15.04■□□□□ -0
CDK5RAP3-225ENST00000582482 CDC42BPAQ5VT25 1732 aa15.01□□□□□ -0.01
CDK5RAP3-225ENST00000582482 EIF4G2P78344 907 aaKnown RBP eCLIP15.01□□□□□ -0.01
CDK5RAP3-225ENST00000582482 CHD1O14646 1710 aa15.01□□□□□ -0.01
CDK5RAP3-225ENST00000582482 ROCK1Q13464 1354 aa15.01□□□□□ -0.01
CDK5RAP3-225ENST00000582482 FKBP8Q14318 412 aa15.01□□□□□ -0.01
CDK5RAP3-225ENST00000582482 ABCA8O94911 1581 aa15□□□□□ -0.01
CDK5RAP3-225ENST00000582482 PTPRGP23470 1445 aa15□□□□□ -0.01
CDK5RAP3-225ENST00000582482 TEX14Q8IWB6 1497 aa15□□□□□ -0.01
CDK5RAP3-225ENST00000582482 KDM2AQ9Y2K7 1162 aa15□□□□□ -0.01
CDK5RAP3-225ENST00000582482 IRX6P78412 446 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-225ENST00000582482 RPRD2Q5VT52 1461 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-225ENST00000582482 ABCC10Q5T3U5 1492 aa14.97□□□□□ -0.01
CDK5RAP3-225ENST00000582482 NUP155O75694 1391 aa14.96□□□□□ -0.01
CDK5RAP3-225ENST00000582482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.013e-9■□□□□ 9.9
CDK5RAP3-225ENST00000582482 ITSN2Q9NZM3 1697 aa14.96□□□□□ -0.01
CDK5RAP3-225ENST00000582482 HNRNPUQ00839 825 aaKnown RBP eCLIP14.95□□□□□ -0.02
CDK5RAP3-225ENST00000582482 C9orf84Q5VXU9 1444 aa14.95□□□□□ -0.02
CDK5RAP3-225ENST00000582482 ANKRD50Q9ULJ7 1429 aa14.95□□□□□ -0.02
CDK5RAP3-225ENST00000582482 ADCY10Q96PN6 1610 aa14.95□□□□□ -0.02
CDK5RAP3-225ENST00000582482 CROCC2H7BZ55 1655 aa14.94□□□□□ -0.02
CDK5RAP3-225ENST00000582482 ANKRD30AQ9BXX3 1397 aa14.93□□□□□ -0.02
CDK5RAP3-225ENST00000582482 KIF7Q2M1P5 1343 aa14.93□□□□□ -0.02
CDK5RAP3-225ENST00000582482 ADGBQ8N7X0 1667 aa14.93□□□□□ -0.02
CDK5RAP3-225ENST00000582482 CCER2I3L3R5 266 aa14.92□□□□□ -0.02
CDK5RAP3-225ENST00000582482 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
CDK5RAP3-225ENST00000582482 CCDC7Q96M83 1385 aa14.92□□□□□ -0.02
CDK5RAP3-225ENST00000582482 KIF15Q9NS87 1388 aa14.91□□□□□ -0.02
CDK5RAP3-225ENST00000582482 TSPY4P0CV99 314 aa14.91□□□□□ -0.02
CDK5RAP3-225ENST00000582482 TSPY10P0CW01 314 aa14.91□□□□□ -0.02
CDK5RAP3-225ENST00000582482 KIAA1107Q9UPP5 1409 aa14.9□□□□□ -0.02
CDK5RAP3-225ENST00000582482 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
CDK5RAP3-225ENST00000582482 TTC37Q6PGP7 1564 aa14.9□□□□□ -0.02
CDK5RAP3-225ENST00000582482 SAMD9LQ8IVG5 1584 aa14.89□□□□□ -0.03
CDK5RAP3-225ENST00000582482 CDC42BPBQ9Y5S2 1711 aa14.88□□□□□ -0.03
CDK5RAP3-225ENST00000582482 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
CDK5RAP3-225ENST00000582482 ADGRL2O95490 1459 aa14.87□□□□□ -0.03
CDK5RAP3-225ENST00000582482 BCORL1Q5H9F3 1711 aa14.87□□□□□ -0.03
CDK5RAP3-225ENST00000582482 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
CDK5RAP3-225ENST00000582482 SYCP2Q9BX26 1530 aa14.87□□□□□ -0.03
CDK5RAP3-225ENST00000582482 DCAF11Q8TEB1 546 aa14.87□□□□□ -0.03
CDK5RAP3-225ENST00000582482 SPATA31E1Q6ZUB1 1445 aa14.86□□□□□ -0.03
CDK5RAP3-225ENST00000582482 PRKRIP1Q9H875 184 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-225ENST00000582482 USP47Q96K76 1375 aa14.85□□□□□ -0.03
CDK5RAP3-225ENST00000582482 MRS2Q9HD23 443 aa14.84□□□□□ -0.03
CDK5RAP3-225ENST00000582482 ARHGAP5Q13017 1502 aa14.84□□□□□ -0.03
CDK5RAP3-225ENST00000582482 TSHZ2Q9NRE2 1034 aa14.83□□□□□ -0.04
CDK5RAP3-225ENST00000582482 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDK5RAP3-225ENST00000582482 ARHGEF12Q9NZN5 1544 aa14.81□□□□□ -0.04
CDK5RAP3-225ENST00000582482 CARD11Q9BXL7 1154 aa14.81□□□□□ -0.04
CDK5RAP3-225ENST00000582482 ST20-MTHFSA0A0A6YYL1 179 aa14.8□□□□□ -0.04
CDK5RAP3-225ENST00000582482 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
CDK5RAP3-225ENST00000582482 PREX2Q70Z35 1606 aa14.79□□□□□ -0.04
CDK5RAP3-225ENST00000582482 CCDC141Q6ZP82 1450 aa14.78□□□□□ -0.04
CDK5RAP3-225ENST00000582482 PLEKHH2Q8IVE3 1493 aa14.78□□□□□ -0.04
CDK5RAP3-225ENST00000582482 AFAP1Q8N556 730 aa14.76□□□□□ -0.05
CDK5RAP3-225ENST00000582482 FAM135AQ9P2D6 1515 aa14.76□□□□□ -0.05
CDK5RAP3-225ENST00000582482 SHANK2Q9UPX8 1470 aa14.76□□□□□ -0.05
CDK5RAP3-225ENST00000582482 SHROOM2Q13796 1616 aa14.75□□□□□ -0.05
CDK5RAP3-225ENST00000582482 NEFLP07196 543 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms