RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
CTC1-208ENST00000581671 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
CTC1-208ENST00000581671 MAGI2Q86UL8 1455 aa16.86■□□□□ 0.29
CTC1-208ENST00000581671 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
CTC1-208ENST00000581671 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
CTC1-208ENST00000581671 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
CTC1-208ENST00000581671 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
CTC1-208ENST00000581671 ATP10AO60312 1499 aa16.79■□□□□ 0.28
CTC1-208ENST00000581671 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.28
CTC1-208ENST00000581671 C3P01024 1663 aa16.77■□□□□ 0.28
CTC1-208ENST00000581671 C9orf84Q5VXU9 1444 aa16.77■□□□□ 0.27
CTC1-208ENST00000581671 CTTNBP2Q8WZ74 1663 aa16.76■□□□□ 0.27
CTC1-208ENST00000581671 CAMSAP1Q5T5Y3 1602 aa16.75■□□□□ 0.27
CTC1-208ENST00000581671 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
CTC1-208ENST00000581671 NCKAP5LQ9HCH0 1330 aa16.74■□□□□ 0.27
CTC1-208ENST00000581671 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
CTC1-208ENST00000581671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
CTC1-208ENST00000581671 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
CTC1-208ENST00000581671 RGS17Q9UGC6 210 aaPredicted RBP16.74■□□□□ 0.27
CTC1-208ENST00000581671 TOM1O60784 492 aa16.73■□□□□ 0.27
CTC1-208ENST00000581671 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
CTC1-208ENST00000581671 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
CTC1-208ENST00000581671 P3H3Q8IVL6 736 aa16.66■□□□□ 0.26
CTC1-208ENST00000581671 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
CTC1-208ENST00000581671 RAPGEF6Q8TEU7 1601 aa16.63■□□□□ 0.25
CTC1-208ENST00000581671 PKD2Q13563 968 aa16.63■□□□□ 0.25
CTC1-208ENST00000581671 ESF1Q9H501 851 aaKnown RBP16.62■□□□□ 0.25
CTC1-208ENST00000581671 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
CTC1-208ENST00000581671 PLEKHD1A6NEE1 506 aa16.6■□□□□ 0.25
CTC1-208ENST00000581671 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
CTC1-208ENST00000581671 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
CTC1-208ENST00000581671 POTEAQ6S8J7 498 aa16.59■□□□□ 0.25
CTC1-208ENST00000581671 NUP153P49790 1475 aaKnown RBP16.59■□□□□ 0.25
CTC1-208ENST00000581671 PLA2R1Q13018 1463 aa16.59■□□□□ 0.25
CTC1-208ENST00000581671 TCOF1Q13428 1488 aaKnown RBP16.59■□□□□ 0.25
CTC1-208ENST00000581671 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
CTC1-208ENST00000581671 CPS1P31327 1500 aa16.56■□□□□ 0.24
CTC1-208ENST00000581671 NPATQ14207 1427 aa16.56■□□□□ 0.24
CTC1-208ENST00000581671 PTPRKQ15262 1439 aa16.55■□□□□ 0.24
CTC1-208ENST00000581671 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
CTC1-208ENST00000581671 AGLP35573 1532 aa16.55■□□□□ 0.24
CTC1-208ENST00000581671 SETD1AO15047 1707 aaKnown RBP16.54■□□□□ 0.24
CTC1-208ENST00000581671 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
CTC1-208ENST00000581671 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
CTC1-208ENST00000581671 PLCH2O75038 1416 aa16.53■□□□□ 0.24
CTC1-208ENST00000581671 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
CTC1-208ENST00000581671 ZNF142P52746 1687 aaPredicted RBP16.52■□□□□ 0.23
CTC1-208ENST00000581671 SHANK2Q9UPX8 1470 aa16.51■□□□□ 0.23
CTC1-208ENST00000581671 ZNF518AQ6AHZ1 1483 aa16.5■□□□□ 0.23
CTC1-208ENST00000581671 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
CTC1-208ENST00000581671 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
CTC1-208ENST00000581671 KDM5CP41229 1560 aa16.5■□□□□ 0.23
CTC1-208ENST00000581671 CEP170BQ9Y4F5 1589 aaPredicted RBP16.48■□□□□ 0.23
CTC1-208ENST00000581671 ABCA6Q8N139 1617 aa16.48■□□□□ 0.23
CTC1-208ENST00000581671 MYO3AQ8NEV4 1616 aa16.48■□□□□ 0.23
CTC1-208ENST00000581671 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
CTC1-208ENST00000581671 ZMYM3Q14202 1370 aa16.47■□□□□ 0.23
CTC1-208ENST00000581671 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
CTC1-208ENST00000581671 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
CTC1-208ENST00000581671 UPF1Q92900 1129 aaKnown RBP eCLIP16.44■□□□□ 0.22
CTC1-208ENST00000581671 MLH3Q9UHC1 1453 aa16.41■□□□□ 0.22
CTC1-208ENST00000581671 MYO5CQ9NQX4 1742 aa16.4■□□□□ 0.22
CTC1-208ENST00000581671 VWDEQ8N2E2 1590 aa16.4■□□□□ 0.22
CTC1-208ENST00000581671 NEURL4Q96JN8 1562 aa16.39■□□□□ 0.21
CTC1-208ENST00000581671 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
CTC1-208ENST00000581671 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
CTC1-208ENST00000581671 DNMT1P26358 1616 aaKnown RBP16.35■□□□□ 0.21
CTC1-208ENST00000581671 A2ML1A8K2U0 1454 aa16.34■□□□□ 0.21
CTC1-208ENST00000581671 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
CTC1-208ENST00000581671 CLTCQ00610 1675 aaKnown RBP16.34■□□□□ 0.21
CTC1-208ENST00000581671 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
CTC1-208ENST00000581671 LRRC7Q96NW7 1537 aa16.32■□□□□ 0.2
CTC1-208ENST00000581671 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
CTC1-208ENST00000581671 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
CTC1-208ENST00000581671 STRCP1A6NGW2 1772 aa16.3■□□□□ 0.2
CTC1-208ENST00000581671 ANKLE2Q86XL3 938 aa16.26■□□□□ 0.19
CTC1-208ENST00000581671 KIF14Q15058 1648 aa16.25■□□□□ 0.19
CTC1-208ENST00000581671 RANGAP1P46060 587 aaPredicted RBP16.24■□□□□ 0.19
CTC1-208ENST00000581671 NPHP4O75161 1426 aaPredicted RBP16.24■□□□□ 0.19
CTC1-208ENST00000581671 SYNMO15061 1565 aa16.24■□□□□ 0.19
CTC1-208ENST00000581671 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
CTC1-208ENST00000581671 MED14O60244 1454 aa16.22■□□□□ 0.19
CTC1-208ENST00000581671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.22■□□□□ 0.19
CTC1-208ENST00000581671 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
CTC1-208ENST00000581671 CDC42BPBQ9Y5S2 1711 aa16.21■□□□□ 0.19
CTC1-208ENST00000581671 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.18
CTC1-208ENST00000581671 ABCC1P33527 1531 aa16.2■□□□□ 0.18
CTC1-208ENST00000581671 DEPDC5O75140 1603 aa16.19■□□□□ 0.18
CTC1-208ENST00000581671 IQGAP1P46940 1657 aa16.18■□□□□ 0.18
CTC1-208ENST00000581671 GGT6Q6P531 493 aa16.18■□□□□ 0.18
CTC1-208ENST00000581671 TNRQ92752 1358 aa16.15■□□□□ 0.18
CTC1-208ENST00000581671 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
CTC1-208ENST00000581671 THEMISQ8N1K5 641 aaPredicted RBP16.15■□□□□ 0.18
CTC1-208ENST00000581671 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
CTC1-208ENST00000581671 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
CTC1-208ENST00000581671 FBXO31Q5XUX0 539 aaPredicted RBP16.13■□□□□ 0.17
CTC1-208ENST00000581671 CDK11AQ9UQ88 783 aaPredicted RBP16.13■□□□□ 0.17
CTC1-208ENST00000581671 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
CTC1-208ENST00000581671 TROQ12816 1431 aaPredicted RBP16.11■□□□□ 0.17
CTC1-208ENST00000581671 ZNF772Q68DY9 489 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms