RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
RIOK3-204ENST00000581220 WASHC2AQ641Q2 1341 aa11.75□□□□□ -0.53
RIOK3-204ENST00000581220 PPP4R2Q9NY27 417 aa11.75□□□□□ -0.53
RIOK3-204ENST00000581220 TOPBP1Q92547 1522 aa11.75□□□□□ -0.53
RIOK3-204ENST00000581220 SYNJ2O15056 1496 aa11.75□□□□□ -0.53
RIOK3-204ENST00000581220 ADGRL1O94910 1474 aa11.75□□□□□ -0.53
RIOK3-204ENST00000581220 ABCC10Q5T3U5 1492 aa11.75□□□□□ -0.53
RIOK3-204ENST00000581220 KDM5BQ9UGL1 1544 aa11.74□□□□□ -0.53
RIOK3-204ENST00000581220 EHBP1L1Q8N3D4 1523 aa11.73□□□□□ -0.53
RIOK3-204ENST00000581220 LRRIQ1Q96JM4 1722 aa11.72□□□□□ -0.53
RIOK3-204ENST00000581220 SAMD9Q5K651 1589 aa11.72□□□□□ -0.53
RIOK3-204ENST00000581220 CNTLNQ9NXG0 1405 aa11.72□□□□□ -0.53
RIOK3-204ENST00000581220 RRP7BPQ9NSQ0 103 aa11.71□□□□□ -0.53
RIOK3-204ENST00000581220 GRIN2BQ13224 1484 aa11.71□□□□□ -0.53
RIOK3-204ENST00000581220 HECW1Q76N89 1606 aa11.7□□□□□ -0.54
RIOK3-204ENST00000581220 CHIC2Q9UKJ5 165 aa11.69□□□□□ -0.54
RIOK3-204ENST00000581220 GCC2Q8IWJ2 1684 aa11.69□□□□□ -0.54
RIOK3-204ENST00000581220 UGGT2Q9NYU1 1516 aa11.69□□□□□ -0.54
RIOK3-204ENST00000581220 FAM9BQ8IZU0 186 aa11.68□□□□□ -0.54
RIOK3-204ENST00000581220 DIP2BQ9P265 1576 aa11.67□□□□□ -0.54
RIOK3-204ENST00000581220 PRKRIP1Q9H875 184 aaPredicted RBP11.67□□□□□ -0.54
RIOK3-204ENST00000581220 MRS2Q9HD23 443 aa11.67□□□□□ -0.54
RIOK3-204ENST00000581220 MYT1LQ9UL68 1186 aa11.67□□□□□ -0.54
RIOK3-204ENST00000581220 TCOF1Q13428 1488 aaKnown RBP11.67□□□□□ -0.54
RIOK3-204ENST00000581220 MPHOSPH9Q99550 1183 aa11.67□□□□□ -0.54
RIOK3-204ENST00000581220 ZBED9Q6R2W3 1325 aa11.66□□□□□ -0.54
RIOK3-204ENST00000581220 AKNAQ7Z591 1439 aa11.66□□□□□ -0.54
RIOK3-204ENST00000581220 CCDC7Q96M83 1385 aa11.66□□□□□ -0.54
RIOK3-204ENST00000581220 CCDC184Q52MB2 194 aa11.65□□□□□ -0.54
RIOK3-204ENST00000581220 L3MBTL2Q969R5 705 aa11.65□□□□□ -0.54
RIOK3-204ENST00000581220 DISP3Q9P2K9 1392 aa11.65□□□□□ -0.54
RIOK3-204ENST00000581220 NCOA1Q15788 1441 aa11.65□□□□□ -0.54
RIOK3-204ENST00000581220 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
RIOK3-204ENST00000581220 ILDR2Q71H61 639 aa11.63□□□□□ -0.55
RIOK3-204ENST00000581220 SHROOM2Q13796 1616 aa11.63□□□□□ -0.55
RIOK3-204ENST00000581220 TDRD9Q8NDG6 1382 aaKnown RBP11.63□□□□□ -0.55
RIOK3-204ENST00000581220 B4GALNT3Q6L9W6 998 aa11.63□□□□□ -0.55
RIOK3-204ENST00000581220 ABCA5Q8WWZ7 1642 aa11.63□□□□□ -0.55
RIOK3-204ENST00000581220 MAGI3Q5TCQ9 1506 aa11.62□□□□□ -0.55
RIOK3-204ENST00000581220 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
RIOK3-204ENST00000581220 MIA2Q96PC5 1412 aa11.61□□□□□ -0.55
RIOK3-204ENST00000581220 FOXD1Q16676 465 aa11.6□□□□□ -0.55
RIOK3-204ENST00000581220 RPRD2Q5VT52 1461 aaKnown RBP11.58□□□□□ -0.56
RIOK3-204ENST00000581220 POLR1AO95602 1720 aaPredicted RBP11.58□□□□□ -0.56
RIOK3-204ENST00000581220 KIF7Q2M1P5 1343 aa11.58□□□□□ -0.56
RIOK3-204ENST00000581220 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
RIOK3-204ENST00000581220 ANKRD30BQ9BXX2 1392 aa11.57□□□□□ -0.56
RIOK3-204ENST00000581220 EPRSP07814 1512 aaKnown RBP11.57□□□□□ -0.56
RIOK3-204ENST00000581220 GLI2P10070 1586 aa11.56□□□□□ -0.56
RIOK3-204ENST00000581220 ROCK1Q13464 1354 aa11.55□□□□□ -0.56
RIOK3-204ENST00000581220 NOP58Q9Y2X3 529 aaKnown RBP11.55□□□□□ -0.56
RIOK3-204ENST00000581220 SMG6Q86US8 1419 aaKnown RBP11.55□□□□□ -0.56
RIOK3-204ENST00000581220 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
RIOK3-204ENST00000581220 SPATA31E1Q6ZUB1 1445 aa11.55□□□□□ -0.56
RIOK3-204ENST00000581220 TEX14Q8IWB6 1497 aa11.55□□□□□ -0.56
RIOK3-204ENST00000581220 IQSEC2Q5JU85 1478 aa11.54□□□□□ -0.56
RIOK3-204ENST00000581220 DAPK1P53355 1430 aa11.53□□□□□ -0.56
RIOK3-204ENST00000581220 DEKP35659 375 aaKnown RBP11.53□□□□□ -0.56
RIOK3-204ENST00000581220 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
RIOK3-204ENST00000581220 CDK13Q14004 1512 aaKnown RBP11.53□□□□□ -0.56
RIOK3-204ENST00000581220 CCDC136Q96JN2 1154 aa11.53□□□□□ -0.56
RIOK3-204ENST00000581220 IQGAP2Q13576 1575 aa11.52□□□□□ -0.57
RIOK3-204ENST00000581220 ARID3CA6NKF2 412 aa11.51□□□□□ -0.57
RIOK3-204ENST00000581220 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
RIOK3-204ENST00000581220 DNMT1P26358 1616 aaKnown RBP11.5□□□□□ -0.57
RIOK3-204ENST00000581220 POLR3GLQ9BT43 218 aa11.5□□□□□ -0.57
RIOK3-204ENST00000581220 ABCC5O15440 1437 aa11.49□□□□□ -0.57
RIOK3-204ENST00000581220 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
RIOK3-204ENST00000581220 RNF123Q5XPI4 1314 aa11.49□□□□□ -0.57
RIOK3-204ENST00000581220 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
RIOK3-204ENST00000581220 CEP170Q5SW79 1584 aa11.48□□□□□ -0.57
RIOK3-204ENST00000581220 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
RIOK3-204ENST00000581220 NBR1Q14596 966 aa11.48□□□□□ -0.57
RIOK3-204ENST00000581220 USP47Q96K76 1375 aa11.47□□□□□ -0.57
RIOK3-204ENST00000581220 IPO9Q96P70 1041 aaKnown RBP11.47□□□□□ -0.57
RIOK3-204ENST00000581220 PBRM1Q86U86 1689 aa11.47□□□□□ -0.57
RIOK3-204ENST00000581220 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
RIOK3-204ENST00000581220 TMC1Q8TDI8 760 aa11.46□□□□□ -0.57
RIOK3-204ENST00000581220 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.58
RIOK3-204ENST00000581220 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.58
RIOK3-204ENST00000581220 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
RIOK3-204ENST00000581220 ZNF644Q9H582 1327 aaPredicted RBP11.45□□□□□ -0.58
RIOK3-204ENST00000581220 ROCK2O75116 1388 aaKnown RBP11.45□□□□□ -0.58
RIOK3-204ENST00000581220 RTL5Q5HYW3 569 aaPredicted RBP11.44□□□□□ -0.58
RIOK3-204ENST00000581220 PNISRQ8TF01 805 aaKnown RBP11.43□□□□□ -0.58
RIOK3-204ENST00000581220 PZPP20742 1482 aa11.43□□□□□ -0.58
RIOK3-204ENST00000581220 KIAA1107Q9UPP5 1409 aa11.43□□□□□ -0.58
RIOK3-204ENST00000581220 BCORL1Q5H9F3 1711 aa11.43□□□□□ -0.58
RIOK3-204ENST00000581220 MBD5Q9P267 1494 aa11.43□□□□□ -0.58
RIOK3-204ENST00000581220 KIF14Q15058 1648 aa11.43□□□□□ -0.58
RIOK3-204ENST00000581220 NUP160Q12769 1436 aa11.43□□□□□ -0.58
RIOK3-204ENST00000581220 ADAMTS12P58397 1594 aa11.43□□□□□ -0.58
RIOK3-204ENST00000581220 PPRC1Q5VV67 1664 aaKnown RBP11.42□□□□□ -0.58
RIOK3-204ENST00000581220 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
RIOK3-204ENST00000581220 KDM5CP41229 1560 aa11.41□□□□□ -0.58
RIOK3-204ENST00000581220 KIF15Q9NS87 1388 aa11.41□□□□□ -0.58
RIOK3-204ENST00000581220 ADGBQ8N7X0 1667 aa11.41□□□□□ -0.58
RIOK3-204ENST00000581220 PKD2Q13563 968 aa11.41□□□□□ -0.58
RIOK3-204ENST00000581220 CFDP1Q9UEE9 299 aaPredicted RBP11.41□□□□□ -0.58
RIOK3-204ENST00000581220 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms