RNA–Protein interactions for RNA: ENST00000580920.1

MIR4258-201, Transcript of microRNA 4258, humanhuman

BASIC

Gene MIR4258, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4258-201ENST00000580920 UHRF1BP1Q6BDS2 1440 aa13.76□□□□□ -0.21
MIR4258-201ENST00000580920 IQSEC2Q5JU85 1478 aa13.75□□□□□ -0.21
MIR4258-201ENST00000580920 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
MIR4258-201ENST00000580920 CEBPAP49715 358 aaPredicted RBP13.75□□□□□ -0.21
MIR4258-201ENST00000580920 PTPRTO14522 1441 aa13.74□□□□□ -0.21
MIR4258-201ENST00000580920 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
MIR4258-201ENST00000580920 MED1Q15648 1581 aaPredicted RBP13.71□□□□□ -0.22
MIR4258-201ENST00000580920 C3P01024 1663 aa13.7□□□□□ -0.22
MIR4258-201ENST00000580920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
MIR4258-201ENST00000580920 HNRNPUL2Q1KMD3 747 aaKnown RBP13.7□□□□□ -0.22
MIR4258-201ENST00000580920 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
MIR4258-201ENST00000580920 NCOA1Q15788 1441 aa13.69□□□□□ -0.22
MIR4258-201ENST00000580920 ATP10AO60312 1499 aa13.68□□□□□ -0.22
MIR4258-201ENST00000580920 SCAPERQ9BY12 1400 aa13.67□□□□□ -0.22
MIR4258-201ENST00000580920 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
MIR4258-201ENST00000580920 CDK13Q14004 1512 aaKnown RBP13.65□□□□□ -0.22
MIR4258-201ENST00000580920 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
MIR4258-201ENST00000580920 KDM5CP41229 1560 aa13.64□□□□□ -0.23
MIR4258-201ENST00000580920 CAMSAP1Q5T5Y3 1602 aa13.62□□□□□ -0.23
MIR4258-201ENST00000580920 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
MIR4258-201ENST00000580920 ZNF335Q9H4Z2 1342 aaPredicted RBP13.61□□□□□ -0.23
MIR4258-201ENST00000580920 PLCH2O75038 1416 aa13.6□□□□□ -0.23
MIR4258-201ENST00000580920 MYO5CQ9NQX4 1742 aa13.6□□□□□ -0.23
MIR4258-201ENST00000580920 ZNF518AQ6AHZ1 1483 aa13.6□□□□□ -0.23
MIR4258-201ENST00000580920 UBAP1LF5GYI3 381 aa13.59□□□□□ -0.23
MIR4258-201ENST00000580920 KIF14Q15058 1648 aa13.58□□□□□ -0.24
MIR4258-201ENST00000580920 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
MIR4258-201ENST00000580920 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
MIR4258-201ENST00000580920 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
MIR4258-201ENST00000580920 MYO3AQ8NEV4 1616 aa13.55□□□□□ -0.24
MIR4258-201ENST00000580920 ZNF142P52746 1687 aaPredicted RBP13.55□□□□□ -0.24
MIR4258-201ENST00000580920 AGLP35573 1532 aa13.54□□□□□ -0.24
MIR4258-201ENST00000580920 SETD1BQ9UPS6 1966 aaKnown RBP13.54□□□□□ -0.24
MIR4258-201ENST00000580920 RANGAP1P46060 587 aaPredicted RBP13.53□□□□□ -0.24
MIR4258-201ENST00000580920 HSPA1LP34931 641 aa13.52□□□□□ -0.25
MIR4258-201ENST00000580920 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.25
MIR4258-201ENST00000580920 MROH2AA6NES4 1674 aa13.51□□□□□ -0.25
MIR4258-201ENST00000580920 TCOF1Q13428 1488 aaKnown RBP13.51□□□□□ -0.25
MIR4258-201ENST00000580920 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
MIR4258-201ENST00000580920 AFAP1Q8N556 730 aa13.5□□□□□ -0.25
MIR4258-201ENST00000580920 CEP170BQ9Y4F5 1589 aaPredicted RBP13.49□□□□□ -0.25
MIR4258-201ENST00000580920 ABCC1P33527 1531 aa13.49□□□□□ -0.25
MIR4258-201ENST00000580920 PLA2R1Q13018 1463 aa13.49□□□□□ -0.25
MIR4258-201ENST00000580920 NPATQ14207 1427 aa13.49□□□□□ -0.25
MIR4258-201ENST00000580920 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
MIR4258-201ENST00000580920 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
MIR4258-201ENST00000580920 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
MIR4258-201ENST00000580920 ITSN2Q9NZM3 1697 aa13.48□□□□□ -0.25
MIR4258-201ENST00000580920 CNTLNQ9NXG0 1405 aa13.47□□□□□ -0.25
MIR4258-201ENST00000580920 KIDINS220Q9ULH0 1771 aa13.47□□□□□ -0.25
MIR4258-201ENST00000580920 SUPT6HQ7KZ85 1726 aaKnown RBP13.47□□□□□ -0.25
MIR4258-201ENST00000580920 EFCAB2Q5VUJ9 269 aa13.46□□□□□ -0.25
MIR4258-201ENST00000580920 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
MIR4258-201ENST00000580920 PREX2Q70Z35 1606 aa13.45□□□□□ -0.26
MIR4258-201ENST00000580920 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
MIR4258-201ENST00000580920 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
MIR4258-201ENST00000580920 NEURL4Q96JN8 1562 aa13.44□□□□□ -0.26
MIR4258-201ENST00000580920 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
MIR4258-201ENST00000580920 MYT1LQ9UL68 1186 aa13.43□□□□□ -0.26
MIR4258-201ENST00000580920 ESF1Q9H501 851 aaKnown RBP13.42□□□□□ -0.26
MIR4258-201ENST00000580920 POLR1AO95602 1720 aaPredicted RBP13.41□□□□□ -0.26
MIR4258-201ENST00000580920 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
MIR4258-201ENST00000580920 TROQ12816 1431 aaPredicted RBP13.4□□□□□ -0.26
MIR4258-201ENST00000580920 CPS1P31327 1500 aa13.4□□□□□ -0.26
MIR4258-201ENST00000580920 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
MIR4258-201ENST00000580920 PPP6R1Q9UPN7 881 aa13.39□□□□□ -0.27
MIR4258-201ENST00000580920 PLXNC1O60486 1568 aa13.39□□□□□ -0.27
MIR4258-201ENST00000580920 SAMD9LQ8IVG5 1584 aa13.39□□□□□ -0.27
MIR4258-201ENST00000580920 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
MIR4258-201ENST00000580920 PKD2Q13563 968 aa13.38□□□□□ -0.27
MIR4258-201ENST00000580920 DNMT1P26358 1616 aaKnown RBP13.38□□□□□ -0.27
MIR4258-201ENST00000580920 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
MIR4258-201ENST00000580920 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
MIR4258-201ENST00000580920 SHANK2Q9UPX8 1470 aa13.36□□□□□ -0.27
MIR4258-201ENST00000580920 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
MIR4258-201ENST00000580920 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
MIR4258-201ENST00000580920 INO80Q9ULG1 1556 aaPredicted RBP13.35□□□□□ -0.27
MIR4258-201ENST00000580920 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
MIR4258-201ENST00000580920 CLIP1P30622 1438 aa13.34□□□□□ -0.27
MIR4258-201ENST00000580920 CDC42BPAQ5VT25 1732 aa13.33□□□□□ -0.27
MIR4258-201ENST00000580920 RNF17Q9BXT8 1623 aaKnown RBP13.33□□□□□ -0.28
MIR4258-201ENST00000580920 TOM1O60784 492 aa13.33□□□□□ -0.28
MIR4258-201ENST00000580920 ATP7AQ04656 1500 aa13.33□□□□□ -0.28
MIR4258-201ENST00000580920 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.28
MIR4258-201ENST00000580920 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
MIR4258-201ENST00000580920 FMN1Q68DA7 1419 aa13.31□□□□□ -0.28
MIR4258-201ENST00000580920 ATP1B4Q9UN42 357 aaPredicted RBP13.31□□□□□ -0.28
MIR4258-201ENST00000580920 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
MIR4258-201ENST00000580920 STRCP1A6NGW2 1772 aa13.3□□□□□ -0.28
MIR4258-201ENST00000580920 SYNMO15061 1565 aa13.28□□□□□ -0.28
MIR4258-201ENST00000580920 A2MP01023 1474 aa13.28□□□□□ -0.28
MIR4258-201ENST00000580920 EEA1Q15075 1411 aa13.26□□□□□ -0.29
MIR4258-201ENST00000580920 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
MIR4258-201ENST00000580920 LRRC7Q96NW7 1537 aa13.25□□□□□ -0.29
MIR4258-201ENST00000580920 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
MIR4258-201ENST00000580920 DEPDC5O75140 1603 aa13.24□□□□□ -0.29
MIR4258-201ENST00000580920 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
MIR4258-201ENST00000580920 SPAG9O60271 1321 aaKnown RBP13.23□□□□□ -0.29
MIR4258-201ENST00000580920 SRCAPQ6ZRS2 3230 aa13.23□□□□□ -0.29
MIR4258-201ENST00000580920 TNRQ92752 1358 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms