RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 CEBPAP49715 358 aaPredicted RBP26.75■■□□□ 1.87
IFT20-209ENST00000579419 SCAPERQ9BY12 1400 aa26.74■■□□□ 1.87
IFT20-209ENST00000579419 FER1L4A9Z1Z3 1794 aa26.74■■□□□ 1.87
IFT20-209ENST00000579419 ARHGEF12Q9NZN5 1544 aa26.71■■□□□ 1.87
IFT20-209ENST00000579419 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.86
IFT20-209ENST00000579419 PLCH2O75038 1416 aa26.67■■□□□ 1.86
IFT20-209ENST00000579419 SOCS7O14512 581 aa26.67■■□□□ 1.86
IFT20-209ENST00000579419 ATP10AO60312 1499 aa26.67■■□□□ 1.86
IFT20-209ENST00000579419 C9orf84Q5VXU9 1444 aa26.65■■□□□ 1.86
IFT20-209ENST00000579419 PREX1Q8TCU6 1659 aa26.63■■□□□ 1.85
IFT20-209ENST00000579419 STRCQ7RTU9 1775 aa26.61■■□□□ 1.85
IFT20-209ENST00000579419 DMRT2Q9Y5R5 561 aa26.57■■□□□ 1.84
IFT20-209ENST00000579419 UHRF1BP1Q6BDS2 1440 aa26.56■■□□□ 1.84
IFT20-209ENST00000579419 EFCAB2Q5VUJ9 269 aa26.55■■□□□ 1.84
IFT20-209ENST00000579419 AFAP1Q8N556 730 aa26.53■■□□□ 1.84
IFT20-209ENST00000579419 ATP1B4Q9UN42 357 aaPredicted RBP26.51■■□□□ 1.83
IFT20-209ENST00000579419 SPATA31D1Q6ZQQ2 1576 aa26.5■■□□□ 1.83
IFT20-209ENST00000579419 EEA1Q15075 1411 aa26.49■■□□□ 1.83
IFT20-209ENST00000579419 ZNF518AQ6AHZ1 1483 aa26.48■■□□□ 1.83
IFT20-209ENST00000579419 PTPRTO14522 1441 aa26.48■■□□□ 1.83
IFT20-209ENST00000579419 KIF14Q15058 1648 aa26.47■■□□□ 1.83
IFT20-209ENST00000579419 MYT1LQ9UL68 1186 aa26.46■■□□□ 1.83
IFT20-209ENST00000579419 KDM5CP41229 1560 aa26.46■■□□□ 1.83
IFT20-209ENST00000579419 DIP2CQ9Y2E4 1556 aa26.46■■□□□ 1.83
IFT20-209ENST00000579419 MYO5CQ9NQX4 1742 aa26.45■■□□□ 1.83
IFT20-209ENST00000579419 LTBP4Q8N2S1 1624 aa26.44■■□□□ 1.82
IFT20-209ENST00000579419 ARHGAP5Q13017 1502 aa26.43■■□□□ 1.82
IFT20-209ENST00000579419 EHMT2Q96KQ7 1210 aa26.41■■□□□ 1.82
IFT20-209ENST00000579419 C3P01024 1663 aa26.39■■□□□ 1.82
IFT20-209ENST00000579419 ABCA6Q8N139 1617 aa26.39■■□□□ 1.81
IFT20-209ENST00000579419 REREQ9P2R6 1566 aa26.37■■□□□ 1.81
IFT20-209ENST00000579419 CDK11AQ9UQ88 783 aaPredicted RBP26.37■■□□□ 1.81
IFT20-209ENST00000579419 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
IFT20-209ENST00000579419 SETD1BQ9UPS6 1966 aaKnown RBP26.37■■□□□ 1.81
IFT20-209ENST00000579419 FMN1Q68DA7 1419 aa26.36■■□□□ 1.81
IFT20-209ENST00000579419 NCOA1Q15788 1441 aa26.35■■□□□ 1.81
IFT20-209ENST00000579419 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
IFT20-209ENST00000579419 MLH3Q9UHC1 1453 aa26.35■■□□□ 1.81
IFT20-209ENST00000579419 ARHGAP35Q9NRY4 1499 aa26.34■■□□□ 1.81
IFT20-209ENST00000579419 ESF1Q9H501 851 aaKnown RBP26.32■■□□□ 1.8
IFT20-209ENST00000579419 AGLP35573 1532 aa26.31■■□□□ 1.8
IFT20-209ENST00000579419 IQSEC2Q5JU85 1478 aa26.3■■□□□ 1.8
IFT20-209ENST00000579419 CLIP1P30622 1438 aa26.29■■□□□ 1.8
IFT20-209ENST00000579419 UBTFP17480 764 aaKnown RBP26.27■■□□□ 1.8
IFT20-209ENST00000579419 CDC42BPBQ9Y5S2 1711 aa26.25■■□□□ 1.79
IFT20-209ENST00000579419 ABCC1P33527 1531 aa26.25■■□□□ 1.79
IFT20-209ENST00000579419 CAMSAP1Q5T5Y3 1602 aa26.25■■□□□ 1.79
IFT20-209ENST00000579419 ZNF335Q9H4Z2 1342 aaPredicted RBP26.24■■□□□ 1.79
IFT20-209ENST00000579419 NCKAP5LQ9HCH0 1330 aa26.24■■□□□ 1.79
IFT20-209ENST00000579419 CNTLNQ9NXG0 1405 aa26.22■■□□□ 1.79
IFT20-209ENST00000579419 LRRIQ1Q96JM4 1722 aa26.22■■□□□ 1.79
IFT20-209ENST00000579419 KIDINS220Q9ULH0 1771 aa26.2■■□□□ 1.78
IFT20-209ENST00000579419 ITSN2Q9NZM3 1697 aa26.19■■□□□ 1.78
IFT20-209ENST00000579419 PREX2Q70Z35 1606 aa26.19■■□□□ 1.78
IFT20-209ENST00000579419 UBAP1LF5GYI3 381 aa26.19■■□□□ 1.78
IFT20-209ENST00000579419 ZMYM3Q14202 1370 aa26.17■■□□□ 1.78
IFT20-209ENST00000579419 NPATQ14207 1427 aa26.16■■□□□ 1.78
IFT20-209ENST00000579419 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
IFT20-209ENST00000579419 ZNF777Q9ULD5 760 aaPredicted RBP26.1■■□□□ 1.77
IFT20-209ENST00000579419 MROH2AA6NES4 1674 aa26.09■■□□□ 1.77
IFT20-209ENST00000579419 SPAG9O60271 1321 aaKnown RBP26.06■■□□□ 1.76
IFT20-209ENST00000579419 PLA2R1Q13018 1463 aa26.05■■□□□ 1.76
IFT20-209ENST00000579419 TCOF1Q13428 1488 aaKnown RBP26.05■■□□□ 1.76
IFT20-209ENST00000579419 SYCP2Q9BX26 1530 aa26.05■■□□□ 1.76
IFT20-209ENST00000579419 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.76
IFT20-209ENST00000579419 PKD2Q13563 968 aa26.05■■□□□ 1.76
IFT20-209ENST00000579419 MYO3AQ8NEV4 1616 aa26.05■■□□□ 1.76
IFT20-209ENST00000579419 PTPRKQ15262 1439 aa26.05■■□□□ 1.76
IFT20-209ENST00000579419 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
IFT20-209ENST00000579419 CDC42BPAQ5VT25 1732 aa26.04■■□□□ 1.76
IFT20-209ENST00000579419 SUPT6HQ7KZ85 1726 aaKnown RBP26.03■■□□□ 1.76
IFT20-209ENST00000579419 CCDC18Q5T9S5 1454 aa26.03■■□□□ 1.76
IFT20-209ENST00000579419 CLTCQ00610 1675 aaKnown RBP26.03■■□□□ 1.76
IFT20-209ENST00000579419 CEP170BQ9Y4F5 1589 aaPredicted RBP26.02■■□□□ 1.76
IFT20-209ENST00000579419 ZNF142P52746 1687 aaPredicted RBP26.01■■□□□ 1.75
IFT20-209ENST00000579419 GGT6Q6P531 493 aa26■■□□□ 1.75
IFT20-209ENST00000579419 PPP6R1Q9UPN7 881 aa26■■□□□ 1.75
IFT20-209ENST00000579419 HSPA1LP34931 641 aa25.99■■□□□ 1.75
IFT20-209ENST00000579419 GPATCH8Q9UKJ3 1502 aaKnown RBP25.98■■□□□ 1.75
IFT20-209ENST00000579419 PLXNC1O60486 1568 aa25.98■■□□□ 1.75
IFT20-209ENST00000579419 ATP7AQ04656 1500 aa25.98■■□□□ 1.75
IFT20-209ENST00000579419 A2MP01023 1474 aa25.98■■□□□ 1.75
IFT20-209ENST00000579419 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
IFT20-209ENST00000579419 PIP4K2BP78356 416 aa25.96■■□□□ 1.75
IFT20-209ENST00000579419 MED1Q15648 1581 aaPredicted RBP25.94■■□□□ 1.74
IFT20-209ENST00000579419 INO80Q9ULG1 1556 aaPredicted RBP25.93■■□□□ 1.74
IFT20-209ENST00000579419 KIAA1107Q9UPP5 1409 aa25.89■■□□□ 1.74
IFT20-209ENST00000579419 A2ML1A8K2U0 1454 aa25.89■■□□□ 1.73
IFT20-209ENST00000579419 CFDP1Q9UEE9 299 aaPredicted RBP25.88■■□□□ 1.73
IFT20-209ENST00000579419 DNMT1P26358 1616 aaKnown RBP25.87■■□□□ 1.73
IFT20-209ENST00000579419 FYCO1Q9BQS8 1478 aa25.86■■□□□ 1.73
IFT20-209ENST00000579419 TOM1O60784 492 aa25.84■■□□□ 1.73
IFT20-209ENST00000579419 FBXO31Q5XUX0 539 aaPredicted RBP25.84■■□□□ 1.73
IFT20-209ENST00000579419 NEURL4Q96JN8 1562 aa25.84■■□□□ 1.73
IFT20-209ENST00000579419 PLEKHH2Q8IVE3 1493 aa25.84■■□□□ 1.73
IFT20-209ENST00000579419 SHANK2Q9UPX8 1470 aa25.82■■□□□ 1.72
IFT20-209ENST00000579419 ZNF644Q9H582 1327 aaPredicted RBP25.82■■□□□ 1.72
IFT20-209ENST00000579419 CCNB3Q8WWL7 1395 aa25.82■■□□□ 1.72
IFT20-209ENST00000579419 CPS1P31327 1500 aa25.81■■□□□ 1.72
IFT20-209ENST00000579419 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms