RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 PREX1Q8TCU6 1659 aa24.21■■□□□ 1.47
PPP4R1-206ENST00000577779 MAGI2Q86UL8 1455 aa24.2■■□□□ 1.47
PPP4R1-206ENST00000577779 PLEKHD1A6NEE1 506 aa24.2■■□□□ 1.46
PPP4R1-206ENST00000577779 DMRT2Q9Y5R5 561 aa24.19■■□□□ 1.46
PPP4R1-206ENST00000577779 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.16■■□□□ 1.46
PPP4R1-206ENST00000577779 HECW1Q76N89 1606 aa24.16■■□□□ 1.46
PPP4R1-206ENST00000577779 STRCQ7RTU9 1775 aa24.14■■□□□ 1.46
PPP4R1-206ENST00000577779 ARHGEF12Q9NZN5 1544 aa24.14■■□□□ 1.45
PPP4R1-206ENST00000577779 CEBPAP49715 358 aaPredicted RBP24.11■■□□□ 1.45
PPP4R1-206ENST00000577779 ATP10AO60312 1499 aa24.08■■□□□ 1.45
PPP4R1-206ENST00000577779 SCAPERQ9BY12 1400 aa24.08■■□□□ 1.44
PPP4R1-206ENST00000577779 RANGAP1P46060 587 aaPredicted RBP24.07■■□□□ 1.44
PPP4R1-206ENST00000577779 UHRF1BP1Q6BDS2 1440 aa24.07■■□□□ 1.44
PPP4R1-206ENST00000577779 C9orf84Q5VXU9 1444 aa24.06■■□□□ 1.44
PPP4R1-206ENST00000577779 SETD1BQ9UPS6 1966 aaKnown RBP24.02■■□□□ 1.44
PPP4R1-206ENST00000577779 PTPRTO14522 1441 aa24.01■■□□□ 1.43
PPP4R1-206ENST00000577779 PLCH2O75038 1416 aa24■■□□□ 1.43
PPP4R1-206ENST00000577779 CSRNP3Q8WYN3 585 aa23.97■■□□□ 1.43
PPP4R1-206ENST00000577779 LTBP4Q8N2S1 1624 aa23.95■■□□□ 1.42
PPP4R1-206ENST00000577779 IQSEC2Q5JU85 1478 aa23.94■■□□□ 1.42
PPP4R1-206ENST00000577779 CDK13Q14004 1512 aaKnown RBP23.94■■□□□ 1.42
PPP4R1-206ENST00000577779 EFCAB2Q5VUJ9 269 aa23.93■■□□□ 1.42
PPP4R1-206ENST00000577779 ZNF518AQ6AHZ1 1483 aa23.9■■□□□ 1.42
PPP4R1-206ENST00000577779 MYO5CQ9NQX4 1742 aa23.9■■□□□ 1.42
PPP4R1-206ENST00000577779 C3P01024 1663 aa23.89■■□□□ 1.42
PPP4R1-206ENST00000577779 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
PPP4R1-206ENST00000577779 AFAP1Q8N556 730 aa23.85■■□□□ 1.41
PPP4R1-206ENST00000577779 ESF1Q9H501 851 aaKnown RBP23.85■■□□□ 1.41
PPP4R1-206ENST00000577779 KDM5CP41229 1560 aa23.85■■□□□ 1.41
PPP4R1-206ENST00000577779 NCOA1Q15788 1441 aa23.84■■□□□ 1.41
PPP4R1-206ENST00000577779 DIP2CQ9Y2E4 1556 aa23.84■■□□□ 1.41
PPP4R1-206ENST00000577779 TRAPPC8Q9Y2L5 1435 aa23.84■■□□□ 1.41
PPP4R1-206ENST00000577779 REREQ9P2R6 1566 aa23.82■■□□□ 1.4
PPP4R1-206ENST00000577779 ARHGAP5Q13017 1502 aa23.79■■□□□ 1.4
PPP4R1-206ENST00000577779 UBAP1LF5GYI3 381 aa23.79■■□□□ 1.4
PPP4R1-206ENST00000577779 ABCA6Q8N139 1617 aa23.78■■□□□ 1.4
PPP4R1-206ENST00000577779 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
PPP4R1-206ENST00000577779 KIF14Q15058 1648 aa23.77■■□□□ 1.4
PPP4R1-206ENST00000577779 CDK11AQ9UQ88 783 aaPredicted RBP23.76■■□□□ 1.39
PPP4R1-206ENST00000577779 CAMSAP1Q5T5Y3 1602 aa23.75■■□□□ 1.39
PPP4R1-206ENST00000577779 AGLP35573 1532 aa23.74■■□□□ 1.39
PPP4R1-206ENST00000577779 MLH3Q9UHC1 1453 aa23.74■■□□□ 1.39
PPP4R1-206ENST00000577779 CNTLNQ9NXG0 1405 aa23.73■■□□□ 1.39
PPP4R1-206ENST00000577779 ZNF335Q9H4Z2 1342 aaPredicted RBP23.72■■□□□ 1.39
PPP4R1-206ENST00000577779 EEA1Q15075 1411 aa23.71■■□□□ 1.39
PPP4R1-206ENST00000577779 NCKAP5LQ9HCH0 1330 aa23.7■■□□□ 1.38
PPP4R1-206ENST00000577779 TROQ12816 1431 aaPredicted RBP23.67■■□□□ 1.38
PPP4R1-206ENST00000577779 NPATQ14207 1427 aa23.67■■□□□ 1.38
PPP4R1-206ENST00000577779 CLIP1P30622 1438 aa23.67■■□□□ 1.38
PPP4R1-206ENST00000577779 FMN1Q68DA7 1419 aa23.67■■□□□ 1.38
PPP4R1-206ENST00000577779 CDC42BPBQ9Y5S2 1711 aa23.65■■□□□ 1.38
PPP4R1-206ENST00000577779 MROH2AA6NES4 1674 aa23.64■■□□□ 1.37
PPP4R1-206ENST00000577779 ABCC1P33527 1531 aa23.62■■□□□ 1.37
PPP4R1-206ENST00000577779 KIDINS220Q9ULH0 1771 aa23.61■■□□□ 1.37
PPP4R1-206ENST00000577779 MED1Q15648 1581 aaPredicted RBP23.61■■□□□ 1.37
PPP4R1-206ENST00000577779 ITSN2Q9NZM3 1697 aa23.6■■□□□ 1.37
PPP4R1-206ENST00000577779 PKD2Q13563 968 aa23.6■■□□□ 1.37
PPP4R1-206ENST00000577779 ZMYM3Q14202 1370 aa23.6■■□□□ 1.37
PPP4R1-206ENST00000577779 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
PPP4R1-206ENST00000577779 PLA2R1Q13018 1463 aa23.58■■□□□ 1.37
PPP4R1-206ENST00000577779 SUPT6HQ7KZ85 1726 aaKnown RBP23.58■■□□□ 1.37
PPP4R1-206ENST00000577779 PREX2Q70Z35 1606 aa23.58■■□□□ 1.36
PPP4R1-206ENST00000577779 HSPA1LP34931 641 aa23.57■■□□□ 1.36
PPP4R1-206ENST00000577779 ZNF142P52746 1687 aaPredicted RBP23.57■■□□□ 1.36
PPP4R1-206ENST00000577779 MYO3AQ8NEV4 1616 aa23.56■■□□□ 1.36
PPP4R1-206ENST00000577779 TCOF1Q13428 1488 aaKnown RBP23.56■■□□□ 1.36
PPP4R1-206ENST00000577779 PIP4K2BP78356 416 aa23.54■■□□□ 1.36
PPP4R1-206ENST00000577779 PPP6R1Q9UPN7 881 aa23.54■■□□□ 1.36
PPP4R1-206ENST00000577779 CEP170BQ9Y4F5 1589 aaPredicted RBP23.53■■□□□ 1.36
PPP4R1-206ENST00000577779 LRRIQ1Q96JM4 1722 aa23.53■■□□□ 1.36
PPP4R1-206ENST00000577779 ARHGAP35Q9NRY4 1499 aa23.52■■□□□ 1.36
PPP4R1-206ENST00000577779 CLTCQ00610 1675 aaKnown RBP23.51■■□□□ 1.35
PPP4R1-206ENST00000577779 SAMD9LQ8IVG5 1584 aa23.49■■□□□ 1.35
PPP4R1-206ENST00000577779 UBTFP17480 764 aaKnown RBP23.49■■□□□ 1.35
PPP4R1-206ENST00000577779 TOM1O60784 492 aa23.48■■□□□ 1.35
PPP4R1-206ENST00000577779 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
PPP4R1-206ENST00000577779 PTPRKQ15262 1439 aa23.48■■□□□ 1.35
PPP4R1-206ENST00000577779 CDC42BPAQ5VT25 1732 aa23.45■■□□□ 1.34
PPP4R1-206ENST00000577779 SPAG9O60271 1321 aaKnown RBP23.45■■□□□ 1.34
PPP4R1-206ENST00000577779 ZNF777Q9ULD5 760 aaPredicted RBP23.43■■□□□ 1.34
PPP4R1-206ENST00000577779 CPS1P31327 1500 aa23.42■■□□□ 1.34
PPP4R1-206ENST00000577779 SYCP2Q9BX26 1530 aa23.41■■□□□ 1.34
PPP4R1-206ENST00000577779 GGT6Q6P531 493 aa23.4■■□□□ 1.34
PPP4R1-206ENST00000577779 PLXNC1O60486 1568 aa23.4■■□□□ 1.34
PPP4R1-206ENST00000577779 ATP7AQ04656 1500 aa23.39■■□□□ 1.34
PPP4R1-206ENST00000577779 A2ML1A8K2U0 1454 aa23.39■■□□□ 1.34
PPP4R1-206ENST00000577779 CCDC18Q5T9S5 1454 aa23.39■■□□□ 1.34
PPP4R1-206ENST00000577779 A2MP01023 1474 aa23.38■■□□□ 1.33
PPP4R1-206ENST00000577779 DNMT1P26358 1616 aaKnown RBP23.38■■□□□ 1.33
PPP4R1-206ENST00000577779 SHANK2Q9UPX8 1470 aa23.37■■□□□ 1.33
PPP4R1-206ENST00000577779 HNRNPMP52272 730 aaKnown RBP eCLIP23.37■■□□□ 1.334e-6■■■■□ 23.6
PPP4R1-206ENST00000577779 POLR1AO95602 1720 aaPredicted RBP23.36■■□□□ 1.33
PPP4R1-206ENST00000577779 INO80Q9ULG1 1556 aaPredicted RBP23.34■■□□□ 1.33
PPP4R1-206ENST00000577779 NEURL4Q96JN8 1562 aa23.33■■□□□ 1.33
PPP4R1-206ENST00000577779 CASKIN1Q8WXD9 1431 aa23.33■■□□□ 1.32
PPP4R1-206ENST00000577779 GPATCH8Q9UKJ3 1502 aaKnown RBP23.29■■□□□ 1.32
PPP4R1-206ENST00000577779 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
PPP4R1-206ENST00000577779 PLEKHH2Q8IVE3 1493 aa23.28■■□□□ 1.32
PPP4R1-206ENST00000577779 ALKQ9UM73 1620 aa23.27■■□□□ 1.32
PPP4R1-206ENST00000577779 VWDEQ8N2E2 1590 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms