RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 FER1L4A9Z1Z3 1794 aa15.99■□□□□ 0.15
CRLF3-202ENST00000577725 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
CRLF3-202ENST00000577725 CEBPAP49715 358 aaPredicted RBP15.97■□□□□ 0.15
CRLF3-202ENST00000577725 ZFYVE16Q7Z3T8 1539 aa15.95■□□□□ 0.14
CRLF3-202ENST00000577725 EFCAB5A4FU69 1503 aa15.94■□□□□ 0.14
CRLF3-202ENST00000577725 ARHGEF12Q9NZN5 1544 aa15.94■□□□□ 0.14
CRLF3-202ENST00000577725 SIGLEC1Q9BZZ2 1709 aa15.94■□□□□ 0.14
CRLF3-202ENST00000577725 ATP10BO94823 1461 aa15.93■□□□□ 0.14
CRLF3-202ENST00000577725 ARID3CA6NKF2 412 aa15.93■□□□□ 0.14
CRLF3-202ENST00000577725 RICTORQ6R327 1708 aa15.93■□□□□ 0.14
CRLF3-202ENST00000577725 ZMYM4Q5VZL5 1548 aa15.93■□□□□ 0.14
CRLF3-202ENST00000577725 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
CRLF3-202ENST00000577725 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
CRLF3-202ENST00000577725 HSPA1LP34931 641 aa15.9■□□□□ 0.14
CRLF3-202ENST00000577725 P3H3Q8IVL6 736 aa15.89■□□□□ 0.13
CRLF3-202ENST00000577725 NCOA1Q15788 1441 aa15.87■□□□□ 0.13
CRLF3-202ENST00000577725 ZNF335Q9H4Z2 1342 aaPredicted RBP15.85■□□□□ 0.13
CRLF3-202ENST00000577725 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
CRLF3-202ENST00000577725 SAMD9Q5K651 1589 aa15.83■□□□□ 0.13
CRLF3-202ENST00000577725 VPS8Q8N3P4 1428 aa15.83■□□□□ 0.12
CRLF3-202ENST00000577725 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.12
CRLF3-202ENST00000577725 C9orf84Q5VXU9 1444 aa15.82■□□□□ 0.12
CRLF3-202ENST00000577725 ATP10AO60312 1499 aa15.82■□□□□ 0.12
CRLF3-202ENST00000577725 HECW1Q76N89 1606 aa15.81■□□□□ 0.12
CRLF3-202ENST00000577725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
CRLF3-202ENST00000577725 PIP4K2BP78356 416 aa15.8■□□□□ 0.12
CRLF3-202ENST00000577725 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
CRLF3-202ENST00000577725 PPARGC1BQ86YN6 1023 aaKnown RBP15.79■□□□□ 0.12
CRLF3-202ENST00000577725 SETD1BQ9UPS6 1966 aaKnown RBP15.78■□□□□ 0.12
CRLF3-202ENST00000577725 TRAPPC8Q9Y2L5 1435 aa15.78■□□□□ 0.12
CRLF3-202ENST00000577725 TOM1O60784 492 aa15.77■□□□□ 0.12
CRLF3-202ENST00000577725 CAMSAP1Q5T5Y3 1602 aa15.74■□□□□ 0.11
CRLF3-202ENST00000577725 NCKAP5LQ9HCH0 1330 aa15.73■□□□□ 0.11
CRLF3-202ENST00000577725 SCAPERQ9BY12 1400 aa15.72■□□□□ 0.11
CRLF3-202ENST00000577725 C3P01024 1663 aa15.7■□□□□ 0.1
CRLF3-202ENST00000577725 PKD2Q13563 968 aa15.7■□□□□ 0.1
CRLF3-202ENST00000577725 ESF1Q9H501 851 aaKnown RBP15.7■□□□□ 0.1
CRLF3-202ENST00000577725 PLEKHD1A6NEE1 506 aa15.69■□□□□ 0.1
CRLF3-202ENST00000577725 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
CRLF3-202ENST00000577725 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.68■□□□□ 0.1
CRLF3-202ENST00000577725 FMN1Q68DA7 1419 aa15.68■□□□□ 0.1
CRLF3-202ENST00000577725 RGS17Q9UGC6 210 aaPredicted RBP15.67■□□□□ 0.1
CRLF3-202ENST00000577725 RAPGEF6Q8TEU7 1601 aa15.67■□□□□ 0.1
CRLF3-202ENST00000577725 PPP6R1Q9UPN7 881 aa15.65■□□□□ 0.1
CRLF3-202ENST00000577725 CASKIN1Q8WXD9 1431 aa15.65■□□□□ 0.1
CRLF3-202ENST00000577725 PLA2R1Q13018 1463 aa15.65■□□□□ 0.1
CRLF3-202ENST00000577725 APLP2Q06481 763 aa15.64■□□□□ 0.09
CRLF3-202ENST00000577725 NUP153P49790 1475 aaKnown RBP15.64■□□□□ 0.09
CRLF3-202ENST00000577725 FYCO1Q9BQS8 1478 aa15.64■□□□□ 0.09
CRLF3-202ENST00000577725 NPATQ14207 1427 aa15.63■□□□□ 0.09
CRLF3-202ENST00000577725 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
CRLF3-202ENST00000577725 CNTLNQ9NXG0 1405 aa15.62■□□□□ 0.09
CRLF3-202ENST00000577725 TCOF1Q13428 1488 aaKnown RBP15.62■□□□□ 0.09
CRLF3-202ENST00000577725 PTPRKQ15262 1439 aa15.61■□□□□ 0.09
CRLF3-202ENST00000577725 CPS1P31327 1500 aa15.61■□□□□ 0.09
CRLF3-202ENST00000577725 PLCH2O75038 1416 aa15.6■□□□□ 0.09
CRLF3-202ENST00000577725 AGLP35573 1532 aa15.6■□□□□ 0.09
CRLF3-202ENST00000577725 TIAM1Q13009 1591 aa15.6■□□□□ 0.09
CRLF3-202ENST00000577725 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
CRLF3-202ENST00000577725 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
CRLF3-202ENST00000577725 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
CRLF3-202ENST00000577725 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.08
CRLF3-202ENST00000577725 DIP2CQ9Y2E4 1556 aa15.56■□□□□ 0.08
CRLF3-202ENST00000577725 CDK13Q14004 1512 aaKnown RBP15.55■□□□□ 0.08
CRLF3-202ENST00000577725 EFCAB2Q5VUJ9 269 aa15.55■□□□□ 0.08
CRLF3-202ENST00000577725 POTEAQ6S8J7 498 aa15.55■□□□□ 0.08
CRLF3-202ENST00000577725 KDM5CP41229 1560 aa15.54■□□□□ 0.08
CRLF3-202ENST00000577725 AFAP1Q8N556 730 aa15.54■□□□□ 0.08
CRLF3-202ENST00000577725 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
CRLF3-202ENST00000577725 MAP3K1Q13233 1512 aa15.53■□□□□ 0.08
CRLF3-202ENST00000577725 SHANK2Q9UPX8 1470 aa15.53■□□□□ 0.08
CRLF3-202ENST00000577725 ALKQ9UM73 1620 aa15.53■□□□□ 0.08
CRLF3-202ENST00000577725 ZMYM3Q14202 1370 aa15.51■□□□□ 0.07
CRLF3-202ENST00000577725 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
CRLF3-202ENST00000577725 LRRC9Q6ZRR7 1453 aa15.51■□□□□ 0.07
CRLF3-202ENST00000577725 CEP170BQ9Y4F5 1589 aaPredicted RBP15.5■□□□□ 0.07
CRLF3-202ENST00000577725 CCDC18Q5T9S5 1454 aa15.5■□□□□ 0.07
CRLF3-202ENST00000577725 PCGF6Q9BYE7 350 aa15.49■□□□□ 0.07
CRLF3-202ENST00000577725 MYO3AQ8NEV4 1616 aa15.49■□□□□ 0.07
CRLF3-202ENST00000577725 MLH3Q9UHC1 1453 aa15.48■□□□□ 0.07
CRLF3-202ENST00000577725 ABCA6Q8N139 1617 aa15.48■□□□□ 0.07
CRLF3-202ENST00000577725 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
CRLF3-202ENST00000577725 MROH2AA6NES4 1674 aa15.48■□□□□ 0.07
CRLF3-202ENST00000577725 MTUS2Q5JR59 1369 aa15.45■□□□□ 0.06
CRLF3-202ENST00000577725 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
CRLF3-202ENST00000577725 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
CRLF3-202ENST00000577725 UPF1Q92900 1129 aaKnown RBP eCLIP15.43■□□□□ 0.06
CRLF3-202ENST00000577725 SRCAPQ6ZRS2 3230 aa15.41■□□□□ 0.06
CRLF3-202ENST00000577725 SETD1AO15047 1707 aaKnown RBP15.41■□□□□ 0.06
CRLF3-202ENST00000577725 VWDEQ8N2E2 1590 aa15.4■□□□□ 0.06
CRLF3-202ENST00000577725 MYO5CQ9NQX4 1742 aa15.4■□□□□ 0.06
CRLF3-202ENST00000577725 A2ML1A8K2U0 1454 aa15.4■□□□□ 0.06
CRLF3-202ENST00000577725 ARHGAP5Q13017 1502 aa15.39■□□□□ 0.05
CRLF3-202ENST00000577725 NEURL4Q96JN8 1562 aa15.39■□□□□ 0.05
CRLF3-202ENST00000577725 RNF17Q9BXT8 1623 aaKnown RBP15.37■□□□□ 0.05
CRLF3-202ENST00000577725 NCOA2Q15596 1464 aa15.37■□□□□ 0.05
CRLF3-202ENST00000577725 DNMT1P26358 1616 aaKnown RBP15.36■□□□□ 0.05
CRLF3-202ENST00000577725 TROQ12816 1431 aaPredicted RBP15.35■□□□□ 0.05
CRLF3-202ENST00000577725 KIF14Q15058 1648 aa15.35■□□□□ 0.05
CRLF3-202ENST00000577725 POLR1AO95602 1720 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms