RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 PREX1Q8TCU6 1659 aa19.91■□□□□ 0.78
SNRPN-208ENST00000577565 STRCQ7RTU9 1775 aa19.9■□□□□ 0.78
SNRPN-208ENST00000577565 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
SNRPN-208ENST00000577565 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
SNRPN-208ENST00000577565 CDK13Q14004 1512 aaKnown RBP19.89■□□□□ 0.77
SNRPN-208ENST00000577565 SCAPERQ9BY12 1400 aa19.89■□□□□ 0.77
SNRPN-208ENST00000577565 SOCS7O14512 581 aa19.87■□□□□ 0.77
SNRPN-208ENST00000577565 CEBPAP49715 358 aaPredicted RBP19.87■□□□□ 0.77
SNRPN-208ENST00000577565 ATP10AO60312 1499 aa19.86■□□□□ 0.77
SNRPN-208ENST00000577565 PLCH2O75038 1416 aa19.85■□□□□ 0.77
SNRPN-208ENST00000577565 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
SNRPN-208ENST00000577565 SPATA31D1Q6ZQQ2 1576 aa19.79■□□□□ 0.76
SNRPN-208ENST00000577565 UHRF1BP1Q6BDS2 1440 aa19.78■□□□□ 0.76
SNRPN-208ENST00000577565 KDM5CP41229 1560 aa19.76■□□□□ 0.75
SNRPN-208ENST00000577565 MYO5CQ9NQX4 1742 aa19.76■□□□□ 0.75
SNRPN-208ENST00000577565 LTBP4Q8N2S1 1624 aa19.76■□□□□ 0.75
SNRPN-208ENST00000577565 KIF14Q15058 1648 aa19.75■□□□□ 0.75
SNRPN-208ENST00000577565 DIP2CQ9Y2E4 1556 aa19.74■□□□□ 0.75
SNRPN-208ENST00000577565 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
SNRPN-208ENST00000577565 PTPRTO14522 1441 aa19.74■□□□□ 0.75
SNRPN-208ENST00000577565 ZNF518AQ6AHZ1 1483 aa19.73■□□□□ 0.75
SNRPN-208ENST00000577565 C3P01024 1663 aa19.72■□□□□ 0.75
SNRPN-208ENST00000577565 EFCAB2Q5VUJ9 269 aa19.72■□□□□ 0.75
SNRPN-208ENST00000577565 AFAP1Q8N556 730 aa19.71■□□□□ 0.75
SNRPN-208ENST00000577565 SETD1BQ9UPS6 1966 aaKnown RBP19.71■□□□□ 0.75
SNRPN-208ENST00000577565 REREQ9P2R6 1566 aa19.7■□□□□ 0.74
SNRPN-208ENST00000577565 EEA1Q15075 1411 aa19.7■□□□□ 0.74
SNRPN-208ENST00000577565 ABCA6Q8N139 1617 aa19.7■□□□□ 0.74
SNRPN-208ENST00000577565 ARHGAP5Q13017 1502 aa19.66■□□□□ 0.74
SNRPN-208ENST00000577565 NCOA1Q15788 1441 aa19.65■□□□□ 0.74
SNRPN-208ENST00000577565 IQSEC2Q5JU85 1478 aa19.64■□□□□ 0.73
SNRPN-208ENST00000577565 AGLP35573 1532 aa19.64■□□□□ 0.73
SNRPN-208ENST00000577565 MLH3Q9UHC1 1453 aa19.63■□□□□ 0.73
SNRPN-208ENST00000577565 TROQ12816 1431 aaPredicted RBP19.63■□□□□ 0.73
SNRPN-208ENST00000577565 TRAPPC8Q9Y2L5 1435 aa19.62■□□□□ 0.73
SNRPN-208ENST00000577565 LRRIQ1Q96JM4 1722 aa19.62■□□□□ 0.73
SNRPN-208ENST00000577565 CDC42BPBQ9Y5S2 1711 aa19.62■□□□□ 0.73
SNRPN-208ENST00000577565 ARHGAP35Q9NRY4 1499 aa19.61■□□□□ 0.73
SNRPN-208ENST00000577565 FMN1Q68DA7 1419 aa19.59■□□□□ 0.73
SNRPN-208ENST00000577565 ATP1B4Q9UN42 357 aaPredicted RBP19.59■□□□□ 0.73
SNRPN-208ENST00000577565 ABCC1P33527 1531 aa19.59■□□□□ 0.73
SNRPN-208ENST00000577565 KIDINS220Q9ULH0 1771 aa19.57■□□□□ 0.72
SNRPN-208ENST00000577565 CAMSAP1Q5T5Y3 1602 aa19.56■□□□□ 0.72
SNRPN-208ENST00000577565 PREX2Q70Z35 1606 aa19.56■□□□□ 0.72
SNRPN-208ENST00000577565 MYT1LQ9UL68 1186 aa19.56■□□□□ 0.72
SNRPN-208ENST00000577565 ITSN2Q9NZM3 1697 aa19.56■□□□□ 0.72
SNRPN-208ENST00000577565 CDK11AQ9UQ88 783 aaPredicted RBP19.55■□□□□ 0.72
SNRPN-208ENST00000577565 CLIP1P30622 1438 aa19.53■□□□□ 0.72
SNRPN-208ENST00000577565 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
SNRPN-208ENST00000577565 ZNF335Q9H4Z2 1342 aaPredicted RBP19.52■□□□□ 0.72
SNRPN-208ENST00000577565 NPATQ14207 1427 aa19.51■□□□□ 0.71
SNRPN-208ENST00000577565 MROH2AA6NES4 1674 aa19.51■□□□□ 0.71
SNRPN-208ENST00000577565 ESF1Q9H501 851 aaKnown RBP19.5■□□□□ 0.71
SNRPN-208ENST00000577565 NCKAP5LQ9HCH0 1330 aa19.5■□□□□ 0.71
SNRPN-208ENST00000577565 EHMT2Q96KQ7 1210 aa19.49■□□□□ 0.71
SNRPN-208ENST00000577565 SAMD9LQ8IVG5 1584 aa19.47■□□□□ 0.71
SNRPN-208ENST00000577565 ZNF142P52746 1687 aaPredicted RBP19.46■□□□□ 0.71
SNRPN-208ENST00000577565 ZMYM3Q14202 1370 aa19.46■□□□□ 0.71
SNRPN-208ENST00000577565 CDC42BPAQ5VT25 1732 aa19.46■□□□□ 0.71
SNRPN-208ENST00000577565 UBAP1LF5GYI3 381 aa19.46■□□□□ 0.71
SNRPN-208ENST00000577565 MYO3AQ8NEV4 1616 aa19.45■□□□□ 0.7
SNRPN-208ENST00000577565 TCOF1Q13428 1488 aaKnown RBP19.45■□□□□ 0.7
SNRPN-208ENST00000577565 PLA2R1Q13018 1463 aa19.44■□□□□ 0.7
SNRPN-208ENST00000577565 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
SNRPN-208ENST00000577565 CEP170BQ9Y4F5 1589 aaPredicted RBP19.42■□□□□ 0.7
SNRPN-208ENST00000577565 CLTCQ00610 1675 aaKnown RBP19.42■□□□□ 0.7
SNRPN-208ENST00000577565 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
SNRPN-208ENST00000577565 PLXNC1O60486 1568 aa19.41■□□□□ 0.7
SNRPN-208ENST00000577565 PTPRKQ15262 1439 aa19.41■□□□□ 0.7
SNRPN-208ENST00000577565 SYCP2Q9BX26 1530 aa19.41■□□□□ 0.7
SNRPN-208ENST00000577565 MED1Q15648 1581 aaPredicted RBP19.38■□□□□ 0.69
SNRPN-208ENST00000577565 CCDC18Q5T9S5 1454 aa19.38■□□□□ 0.69
SNRPN-208ENST00000577565 CASKIN1Q8WXD9 1431 aa19.37■□□□□ 0.69
SNRPN-208ENST00000577565 PKD2Q13563 968 aa19.37■□□□□ 0.69
SNRPN-208ENST00000577565 INO80Q9ULG1 1556 aaPredicted RBP19.36■□□□□ 0.69
SNRPN-208ENST00000577565 ATP7AQ04656 1500 aa19.36■□□□□ 0.69
SNRPN-208ENST00000577565 GPATCH8Q9UKJ3 1502 aaKnown RBP19.35■□□□□ 0.69
SNRPN-208ENST00000577565 SPAG9O60271 1321 aaKnown RBP19.34■□□□□ 0.69
SNRPN-208ENST00000577565 HSPA1LP34931 641 aa19.34■□□□□ 0.69
SNRPN-208ENST00000577565 HNRNPMP52272 730 aaKnown RBP eCLIP19.33■□□□□ 0.686e-7■□□□□ 9.7
SNRPN-208ENST00000577565 ZNF777Q9ULD5 760 aaPredicted RBP19.33■□□□□ 0.68
SNRPN-208ENST00000577565 A2MP01023 1474 aa19.33■□□□□ 0.68
SNRPN-208ENST00000577565 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
SNRPN-208ENST00000577565 NEURL4Q96JN8 1562 aa19.31■□□□□ 0.68
SNRPN-208ENST00000577565 DNMT1P26358 1616 aaKnown RBP19.3■□□□□ 0.68
SNRPN-208ENST00000577565 A2ML1A8K2U0 1454 aa19.29■□□□□ 0.68
SNRPN-208ENST00000577565 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
SNRPN-208ENST00000577565 GGT6Q6P531 493 aa19.28■□□□□ 0.68
SNRPN-208ENST00000577565 ALKQ9UM73 1620 aa19.28■□□□□ 0.68
SNRPN-208ENST00000577565 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
SNRPN-208ENST00000577565 FYCO1Q9BQS8 1478 aa19.26■□□□□ 0.67
SNRPN-208ENST00000577565 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
SNRPN-208ENST00000577565 CPS1P31327 1500 aa19.25■□□□□ 0.67
SNRPN-208ENST00000577565 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
SNRPN-208ENST00000577565 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
SNRPN-208ENST00000577565 PLEKHH2Q8IVE3 1493 aa19.23■□□□□ 0.67
SNRPN-208ENST00000577565 ADGBQ8N7X0 1667 aa19.23■□□□□ 0.67
SNRPN-208ENST00000577565 VWDEQ8N2E2 1590 aa19.22■□□□□ 0.67
SNRPN-208ENST00000577565 CFDP1Q9UEE9 299 aaPredicted RBP19.2■□□□□ 0.66
SNRPN-208ENST00000577565 TOM1O60784 492 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms