RNA–Protein interactions for RNA: ENST00000576625.5

LCMT1-212, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-212ENST00000576625 IQSEC2Q5JU85 1478 aa14.85□□□□□ -0.03
LCMT1-212ENST00000576625 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
LCMT1-212ENST00000576625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.85□□□□□ -0.03
LCMT1-212ENST00000576625 POGZQ7Z3K3 1410 aa14.84□□□□□ -0.03
LCMT1-212ENST00000576625 FANCAO15360 1455 aa14.84□□□□□ -0.03
LCMT1-212ENST00000576625 PREX1Q8TCU6 1659 aa14.84□□□□□ -0.03
LCMT1-212ENST00000576625 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.03
LCMT1-212ENST00000576625 RICTORQ6R327 1708 aa14.83□□□□□ -0.03
LCMT1-212ENST00000576625 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
LCMT1-212ENST00000576625 PTPRTO14522 1441 aa14.82□□□□□ -0.04
LCMT1-212ENST00000576625 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
LCMT1-212ENST00000576625 AKNAQ7Z591 1439 aa14.81□□□□□ -0.04
LCMT1-212ENST00000576625 ZMYM4Q5VZL5 1548 aa14.81□□□□□ -0.04
LCMT1-212ENST00000576625 FER1L4A9Z1Z3 1794 aa14.8□□□□□ -0.04
LCMT1-212ENST00000576625 DENND4BO75064 1496 aaPredicted RBP14.8□□□□□ -0.04
LCMT1-212ENST00000576625 ARHGEF12Q9NZN5 1544 aa14.78□□□□□ -0.04
LCMT1-212ENST00000576625 ZFYVE16Q7Z3T8 1539 aa14.76□□□□□ -0.05
LCMT1-212ENST00000576625 MAGI2Q86UL8 1455 aa14.75□□□□□ -0.05
LCMT1-212ENST00000576625 CTTNBP2Q8WZ74 1663 aa14.74□□□□□ -0.05
LCMT1-212ENST00000576625 EFCAB5A4FU69 1503 aa14.74□□□□□ -0.05
LCMT1-212ENST00000576625 ARID3CA6NKF2 412 aa14.73□□□□□ -0.05
LCMT1-212ENST00000576625 SETD1BQ9UPS6 1966 aaKnown RBP14.73□□□□□ -0.05
LCMT1-212ENST00000576625 CEBPAP49715 358 aaPredicted RBP14.72□□□□□ -0.05
LCMT1-212ENST00000576625 MLECQ14165 292 aa14.72□□□□□ -0.05
LCMT1-212ENST00000576625 UHRF1BP1Q6BDS2 1440 aa14.72□□□□□ -0.05
LCMT1-212ENST00000576625 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
LCMT1-212ENST00000576625 MED1Q15648 1581 aaPredicted RBP14.68□□□□□ -0.06
LCMT1-212ENST00000576625 HECW1Q76N89 1606 aa14.68□□□□□ -0.06
LCMT1-212ENST00000576625 CFAP74Q9C0B2 1584 aa14.67□□□□□ -0.06
LCMT1-212ENST00000576625 NCOA1Q15788 1441 aa14.66□□□□□ -0.06
LCMT1-212ENST00000576625 ATP10AO60312 1499 aa14.65□□□□□ -0.06
LCMT1-212ENST00000576625 C9orf84Q5VXU9 1444 aa14.64□□□□□ -0.07
LCMT1-212ENST00000576625 UBAP1LF5GYI3 381 aa14.63□□□□□ -0.07
LCMT1-212ENST00000576625 RAPGEF6Q8TEU7 1601 aa14.62□□□□□ -0.07
LCMT1-212ENST00000576625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.61□□□□□ -0.07
LCMT1-212ENST00000576625 NUP153P49790 1475 aaKnown RBP14.61□□□□□ -0.07
LCMT1-212ENST00000576625 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
LCMT1-212ENST00000576625 C3P01024 1663 aa14.58□□□□□ -0.08
LCMT1-212ENST00000576625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
LCMT1-212ENST00000576625 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
LCMT1-212ENST00000576625 P3H3Q8IVL6 736 aa14.57□□□□□ -0.08
LCMT1-212ENST00000576625 ZNF335Q9H4Z2 1342 aaPredicted RBP14.57□□□□□ -0.08
LCMT1-212ENST00000576625 SCAPERQ9BY12 1400 aa14.57□□□□□ -0.08
LCMT1-212ENST00000576625 TRAPPC8Q9Y2L5 1435 aa14.57□□□□□ -0.08
LCMT1-212ENST00000576625 HSPA1LP34931 641 aa14.56□□□□□ -0.08
LCMT1-212ENST00000576625 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
LCMT1-212ENST00000576625 PRXQ9BXM0 1461 aa14.56□□□□□ -0.08
LCMT1-212ENST00000576625 SAMD9Q5K651 1589 aa14.56□□□□□ -0.08
LCMT1-212ENST00000576625 CAMSAP1Q5T5Y3 1602 aa14.52□□□□□ -0.08
LCMT1-212ENST00000576625 PLEKHD1A6NEE1 506 aa14.52□□□□□ -0.09
LCMT1-212ENST00000576625 REREQ9P2R6 1566 aa14.51□□□□□ -0.09
LCMT1-212ENST00000576625 PLCH2O75038 1416 aa14.51□□□□□ -0.09
LCMT1-212ENST00000576625 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
LCMT1-212ENST00000576625 KDM5CP41229 1560 aa14.48□□□□□ -0.09
LCMT1-212ENST00000576625 NCKAP5LQ9HCH0 1330 aa14.48□□□□□ -0.09
LCMT1-212ENST00000576625 AGLP35573 1532 aa14.48□□□□□ -0.09
LCMT1-212ENST00000576625 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
LCMT1-212ENST00000576625 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
LCMT1-212ENST00000576625 DIP2CQ9Y2E4 1556 aa14.47□□□□□ -0.09
LCMT1-212ENST00000576625 PLA2R1Q13018 1463 aa14.46□□□□□ -0.09
LCMT1-212ENST00000576625 TCOF1Q13428 1488 aaKnown RBP14.46□□□□□ -0.09
LCMT1-212ENST00000576625 NPATQ14207 1427 aa14.46□□□□□ -0.09
LCMT1-212ENST00000576625 ZNF518AQ6AHZ1 1483 aa14.44□□□□□ -0.1
LCMT1-212ENST00000576625 CNTLNQ9NXG0 1405 aa14.43□□□□□ -0.1
LCMT1-212ENST00000576625 PKD2Q13563 968 aa14.43□□□□□ -0.1
LCMT1-212ENST00000576625 ALKQ9UM73 1620 aa14.42□□□□□ -0.1
LCMT1-212ENST00000576625 ABCA6Q8N139 1617 aa14.41□□□□□ -0.1
LCMT1-212ENST00000576625 PIP4K2BP78356 416 aa14.41□□□□□ -0.1
LCMT1-212ENST00000576625 APLP2Q06481 763 aa14.41□□□□□ -0.1
LCMT1-212ENST00000576625 AFAP1Q8N556 730 aa14.41□□□□□ -0.1
LCMT1-212ENST00000576625 RGS17Q9UGC6 210 aaPredicted RBP14.41□□□□□ -0.1
LCMT1-212ENST00000576625 ZNF142P52746 1687 aaPredicted RBP14.4□□□□□ -0.1
LCMT1-212ENST00000576625 TOM1O60784 492 aa14.4□□□□□ -0.1
LCMT1-212ENST00000576625 EFCAB2Q5VUJ9 269 aa14.4□□□□□ -0.1
LCMT1-212ENST00000576625 MLH3Q9UHC1 1453 aa14.39□□□□□ -0.11
LCMT1-212ENST00000576625 C1QBPQ07021 282 aaKnown RBP14.39□□□□□ -0.11
LCMT1-212ENST00000576625 MROH2AA6NES4 1674 aa14.39□□□□□ -0.11
LCMT1-212ENST00000576625 CPS1P31327 1500 aa14.37□□□□□ -0.11
LCMT1-212ENST00000576625 MYO5CQ9NQX4 1742 aa14.36□□□□□ -0.11
LCMT1-212ENST00000576625 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
LCMT1-212ENST00000576625 CDK13Q14004 1512 aaKnown RBP14.36□□□□□ -0.11
LCMT1-212ENST00000576625 ZMYM3Q14202 1370 aa14.35□□□□□ -0.11
LCMT1-212ENST00000576625 MYO3AQ8NEV4 1616 aa14.35□□□□□ -0.11
LCMT1-212ENST00000576625 CEP170BQ9Y4F5 1589 aaPredicted RBP14.34□□□□□ -0.11
LCMT1-212ENST00000576625 SHANK2Q9UPX8 1470 aa14.32□□□□□ -0.12
LCMT1-212ENST00000576625 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
LCMT1-212ENST00000576625 SUPT6HQ7KZ85 1726 aaKnown RBP14.29□□□□□ -0.12
LCMT1-212ENST00000576625 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
LCMT1-212ENST00000576625 NEURL4Q96JN8 1562 aa14.29□□□□□ -0.12
LCMT1-212ENST00000576625 ARHGAP5Q13017 1502 aa14.28□□□□□ -0.12
LCMT1-212ENST00000576625 KIF14Q15058 1648 aa14.28□□□□□ -0.12
LCMT1-212ENST00000576625 VWDEQ8N2E2 1590 aa14.27□□□□□ -0.12
LCMT1-212ENST00000576625 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
LCMT1-212ENST00000576625 MYT1LQ9UL68 1186 aa14.26□□□□□ -0.13
LCMT1-212ENST00000576625 DNMT1P26358 1616 aaKnown RBP14.26□□□□□ -0.13
LCMT1-212ENST00000576625 A2ML1A8K2U0 1454 aa14.25□□□□□ -0.13
LCMT1-212ENST00000576625 ABCC1P33527 1531 aa14.25□□□□□ -0.13
LCMT1-212ENST00000576625 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
LCMT1-212ENST00000576625 POLR1AO95602 1720 aaPredicted RBP14.23□□□□□ -0.13
LCMT1-212ENST00000576625 CLTCQ00610 1675 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms