RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 CCDC70Q6NSX1 233 aa12.59□□□□□ -0.39
USP6-205ENST00000574788 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
USP6-205ENST00000574788 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
USP6-205ENST00000574788 RRP7BPQ9NSQ0 103 aa12.58□□□□□ -0.4
USP6-205ENST00000574788 CFDP1Q9UEE9 299 aaPredicted RBP12.58□□□□□ -0.4
USP6-205ENST00000574788 TMF1P82094 1093 aa12.57□□□□□ -0.4
USP6-205ENST00000574788 KCNH8Q96L42 1107 aa12.57□□□□□ -0.4
USP6-205ENST00000574788 CALRP27797 417 aaKnown RBP12.57□□□□□ -0.4
USP6-205ENST00000574788 MIER1Q8N108 512 aa12.57□□□□□ -0.4
USP6-205ENST00000574788 CCDC180Q9P1Z9 1646 aa12.56□□□□□ -0.4
USP6-205ENST00000574788 RASSF8Q8NHQ8 419 aa12.56□□□□□ -0.4
USP6-205ENST00000574788 GPS2Q13227 327 aa12.56□□□□□ -0.4
USP6-205ENST00000574788 GORABQ5T7V8 394 aa12.54□□□□□ -0.4
USP6-205ENST00000574788 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
USP6-205ENST00000574788 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
USP6-205ENST00000574788 TPM1P09493 284 aa12.53□□□□□ -0.4
USP6-205ENST00000574788 TPM2P07951 284 aa12.53□□□□□ -0.4
USP6-205ENST00000574788 HMMRO75330 724 aa12.52□□□□□ -0.4
USP6-205ENST00000574788 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
USP6-205ENST00000574788 GOLGA3Q08378 1498 aa12.52□□□□□ -0.41
USP6-205ENST00000574788 G3V3G9 751 aa12.51□□□□□ -0.41
USP6-205ENST00000574788 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
USP6-205ENST00000574788 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
USP6-205ENST00000574788 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
USP6-205ENST00000574788 RTN4Q9NQC3 1192 aaKnown RBP12.5□□□□□ -0.41
USP6-205ENST00000574788 TCERG1O14776 1098 aaKnown RBP12.5□□□□□ -0.41
USP6-205ENST00000574788 TAF7LQ5H9L4 462 aa12.49□□□□□ -0.41
USP6-205ENST00000574788 LRRFIP1Q32MZ4 808 aaKnown RBP12.49□□□□□ -0.41
USP6-205ENST00000574788 ATP6V1DQ9Y5K8 247 aa12.49□□□□□ -0.41
USP6-205ENST00000574788 SRPK2P78362 688 aaKnown RBP12.49□□□□□ -0.41
USP6-205ENST00000574788 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
USP6-205ENST00000574788 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
USP6-205ENST00000574788 MORC1Q86VD1 984 aa12.48□□□□□ -0.41
USP6-205ENST00000574788 HIRIP3Q9BW71 556 aaPredicted RBP12.47□□□□□ -0.41
USP6-205ENST00000574788 STK31Q9BXU1 1019 aa12.47□□□□□ -0.41
USP6-205ENST00000574788 HSP90B1P14625 803 aaKnown RBP12.47□□□□□ -0.41
USP6-205ENST00000574788 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
USP6-205ENST00000574788 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
USP6-205ENST00000574788 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
USP6-205ENST00000574788 MARCH6O60337 910 aa12.47□□□□□ -0.41
USP6-205ENST00000574788 IPO7O95373 1038 aaKnown RBP12.46□□□□□ -0.41
USP6-205ENST00000574788 PMFBP1Q8TBY8 1022 aa12.46□□□□□ -0.41
USP6-205ENST00000574788 TCEAL9Q9UHQ7 104 aa12.46□□□□□ -0.41
USP6-205ENST00000574788 TPD52L1Q16890 204 aaPredicted RBP12.46□□□□□ -0.41
USP6-205ENST00000574788 ST18O60284 1047 aa12.46□□□□□ -0.41
USP6-205ENST00000574788 EIF3AQ14152 1382 aaKnown RBP12.46□□□□□ -0.41
USP6-205ENST00000574788 KTN1Q86UP2 1357 aaKnown RBP12.45□□□□□ -0.42
USP6-205ENST00000574788 CC2D1BQ5T0F9 858 aaKnown RBP12.45□□□□□ -0.42
USP6-205ENST00000574788 GOLGA6L3A6NEY3 463 aa12.44□□□□□ -0.42
USP6-205ENST00000574788 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
USP6-205ENST00000574788 ANKRD20A12PQ8NF67 263 aa12.44□□□□□ -0.42
USP6-205ENST00000574788 TIMELESSQ9UNS1 1208 aa12.44□□□□□ -0.42
USP6-205ENST00000574788 GOLGA6L19H0YKK7 550 aa12.43□□□□□ -0.42
USP6-205ENST00000574788 CDR1P51861 262 aa12.43□□□□□ -0.42
USP6-205ENST00000574788 VPS53Q5VIR6 699 aa12.43□□□□□ -0.42
USP6-205ENST00000574788 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
USP6-205ENST00000574788 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
USP6-205ENST00000574788 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
USP6-205ENST00000574788 AKAP17AQ02040 695 aaKnown RBP12.42□□□□□ -0.42
USP6-205ENST00000574788 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
USP6-205ENST00000574788 CREBRFQ8IUR6 639 aa12.41□□□□□ -0.42
USP6-205ENST00000574788 AMOTL1Q8IY63 956 aa12.41□□□□□ -0.42
USP6-205ENST00000574788 TEX35Q5T0J7 233 aa12.41□□□□□ -0.42
USP6-205ENST00000574788 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
USP6-205ENST00000574788 DDX11L8A8MPP1 907 aa12.4□□□□□ -0.42
USP6-205ENST00000574788 PES1O00541 588 aaKnown RBP12.4□□□□□ -0.42
USP6-205ENST00000574788 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
USP6-205ENST00000574788 CCNB3Q8WWL7 1395 aa12.4□□□□□ -0.42
USP6-205ENST00000574788 FRAT2O75474 233 aaPredicted RBP12.4□□□□□ -0.43
USP6-205ENST00000574788 DEKP35659 375 aaKnown RBP12.4□□□□□ -0.43
USP6-205ENST00000574788 ITPRIPQ8IWB1 547 aa12.39□□□□□ -0.43
USP6-205ENST00000574788 CSB-PGBD3P0DP91 1061 aa12.39□□□□□ -0.43
USP6-205ENST00000574788 CPLX2Q6PUV4 134 aaKnown RBP12.39□□□□□ -0.43
USP6-205ENST00000574788 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP6-205ENST00000574788 CCDC47Q96A33 483 aaKnown RBP12.39□□□□□ -0.43
USP6-205ENST00000574788 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
USP6-205ENST00000574788 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
USP6-205ENST00000574788 CNKSR2Q8WXI2 1034 aa12.39□□□□□ -0.43
USP6-205ENST00000574788 PDE4CQ08493 712 aa12.39□□□□□ -0.43
USP6-205ENST00000574788 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
USP6-205ENST00000574788 CEP164Q9UPV0 1460 aa12.38□□□□□ -0.43
USP6-205ENST00000574788 H3BQV1 296 aa12.38□□□□□ -0.43
USP6-205ENST00000574788 CCER2I3L3R5 266 aa12.38□□□□□ -0.43
USP6-205ENST00000574788 IFFO2Q5TF58 517 aa12.38□□□□□ -0.43
USP6-205ENST00000574788 B4GALNT3Q6L9W6 998 aa12.38□□□□□ -0.43
USP6-205ENST00000574788 ERCC6Q03468 1493 aa12.37□□□□□ -0.43
USP6-205ENST00000574788 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
USP6-205ENST00000574788 RALBP1Q15311 655 aa12.37□□□□□ -0.43
USP6-205ENST00000574788 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
USP6-205ENST00000574788 SKOR2Q2VWA4 1001 aaPredicted RBP12.36□□□□□ -0.43
USP6-205ENST00000574788 DCAF11Q8TEB1 546 aa12.36□□□□□ -0.43
USP6-205ENST00000574788 BECN2A8MW95 431 aa12.36□□□□□ -0.43
USP6-205ENST00000574788 NOM1Q5C9Z4 860 aaKnown RBP12.36□□□□□ -0.43
USP6-205ENST00000574788 NOL10Q9BSC4 688 aaKnown RBP12.36□□□□□ -0.43
USP6-205ENST00000574788 SYNE3Q6ZMZ3 975 aa12.36□□□□□ -0.43
USP6-205ENST00000574788 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
USP6-205ENST00000574788 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
USP6-205ENST00000574788 CEP162Q5TB80 1403 aa12.35□□□□□ -0.43
USP6-205ENST00000574788 APBB1O00213 710 aa12.35□□□□□ -0.43
USP6-205ENST00000574788 TRIM34Q9BYJ4 488 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms