RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 NBPF8Q3BBV2 869 aa19.37■□□□□ 0.69
SMG6-215ENST00000574501 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
SMG6-215ENST00000574501 MPHOSPH9Q99550 1183 aa19.33■□□□□ 0.69
SMG6-215ENST00000574501 MYOM3Q5VTT5 1437 aa19.33■□□□□ 0.68
SMG6-215ENST00000574501 USP35Q9P2H5 1018 aa19.32■□□□□ 0.68
SMG6-215ENST00000574501 PDE4AP27815 886 aa19.32■□□□□ 0.68
SMG6-215ENST00000574501 BRPF3Q9ULD4 1205 aa19.31■□□□□ 0.68
SMG6-215ENST00000574501 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
SMG6-215ENST00000574501 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
SMG6-215ENST00000574501 ERCC6Q03468 1493 aa19.29■□□□□ 0.68
SMG6-215ENST00000574501 EFCAB5A4FU69 1503 aa19.28■□□□□ 0.68
SMG6-215ENST00000574501 KIF21AQ7Z4S6 1674 aa19.28■□□□□ 0.68
SMG6-215ENST00000574501 KDM6BO15054 1643 aa19.28■□□□□ 0.68
SMG6-215ENST00000574501 TCERG1O14776 1098 aaKnown RBP19.27■□□□□ 0.68
SMG6-215ENST00000574501 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.68
SMG6-215ENST00000574501 BACH2Q9BYV9 841 aa19.26■□□□□ 0.67
SMG6-215ENST00000574501 SPATA31E1Q6ZUB1 1445 aa19.26■□□□□ 0.67
SMG6-215ENST00000574501 DHX29Q7Z478 1369 aaKnown RBP19.26■□□□□ 0.67
SMG6-215ENST00000574501 HECW1Q76N89 1606 aa19.26■□□□□ 0.67
SMG6-215ENST00000574501 PPM1GO15355 546 aaPredicted RBP19.25■□□□□ 0.67
SMG6-215ENST00000574501 RRP1P56182 461 aaKnown RBP19.23■□□□□ 0.67
SMG6-215ENST00000574501 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
SMG6-215ENST00000574501 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
SMG6-215ENST00000574501 UBE2Q2Q8WVN8 375 aa19.22■□□□□ 0.67
SMG6-215ENST00000574501 LRRIQ1Q96JM4 1722 aa19.21■□□□□ 0.67
SMG6-215ENST00000574501 EIF5BO60841 1220 aaKnown RBP19.21■□□□□ 0.67
SMG6-215ENST00000574501 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
SMG6-215ENST00000574501 SKAP1Q86WV1 359 aa19.2■□□□□ 0.66
SMG6-215ENST00000574501 GSE1Q14687 1217 aa19.2■□□□□ 0.66
SMG6-215ENST00000574501 SUPT6HQ7KZ85 1726 aaKnown RBP19.19■□□□□ 0.66
SMG6-215ENST00000574501 GCC2Q8IWJ2 1684 aa19.18■□□□□ 0.66
SMG6-215ENST00000574501 ANKRD30BQ9BXX2 1392 aa19.17■□□□□ 0.66
SMG6-215ENST00000574501 POLR1AO95602 1720 aaPredicted RBP19.17■□□□□ 0.66
SMG6-215ENST00000574501 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
SMG6-215ENST00000574501 RPRD2Q5VT52 1461 aaKnown RBP19.17■□□□□ 0.66
SMG6-215ENST00000574501 TEX14Q8IWB6 1497 aa19.17■□□□□ 0.66
SMG6-215ENST00000574501 SLC4A3P48751 1232 aa19.16■□□□□ 0.66
SMG6-215ENST00000574501 ZNF326Q5BKZ1 582 aaKnown RBP19.16■□□□□ 0.66
SMG6-215ENST00000574501 RCAN3Q9UKA8 241 aa19.15■□□□□ 0.66
SMG6-215ENST00000574501 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
SMG6-215ENST00000574501 MS4A1P11836 297 aa19.15■□□□□ 0.66
SMG6-215ENST00000574501 NFKBIBQ15653 356 aa19.15■□□□□ 0.66
SMG6-215ENST00000574501 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.66
SMG6-215ENST00000574501 TOPBP1Q92547 1522 aa19.14■□□□□ 0.65
SMG6-215ENST00000574501 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
SMG6-215ENST00000574501 UGGT2Q9NYU1 1516 aa19.14■□□□□ 0.65
SMG6-215ENST00000574501 CTTNBP2Q8WZ74 1663 aa19.13■□□□□ 0.65
SMG6-215ENST00000574501 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
SMG6-215ENST00000574501 DNMBPQ6XZF7 1577 aa19.12■□□□□ 0.65
SMG6-215ENST00000574501 GRIN2BQ13224 1484 aa19.12■□□□□ 0.65
SMG6-215ENST00000574501 MAGI3Q5TCQ9 1506 aa19.11■□□□□ 0.65
SMG6-215ENST00000574501 SLC4A1APQ9BWU0 796 aaKnown RBP19.11■□□□□ 0.65
SMG6-215ENST00000574501 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
SMG6-215ENST00000574501 BCORL1Q5H9F3 1711 aa19.1■□□□□ 0.65
SMG6-215ENST00000574501 USP47Q96K76 1375 aa19.1■□□□□ 0.65
SMG6-215ENST00000574501 PLIN1O60240 522 aa19.09■□□□□ 0.65
SMG6-215ENST00000574501 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.65
SMG6-215ENST00000574501 MIA2Q96PC5 1412 aa19.08■□□□□ 0.65
SMG6-215ENST00000574501 ARHGEF11O15085 1522 aa19.07■□□□□ 0.64
SMG6-215ENST00000574501 LRPPRCP42704 1394 aaKnown RBP19.06■□□□□ 0.64
SMG6-215ENST00000574501 ARID3CA6NKF2 412 aa19.05■□□□□ 0.64
SMG6-215ENST00000574501 THOC2Q8NI27 1593 aaKnown RBP19.04■□□□□ 0.64
SMG6-215ENST00000574501 CDCA7LQ96GN5 454 aa19.04■□□□□ 0.64
SMG6-215ENST00000574501 DAXXQ9UER7 740 aaPredicted RBP19.04■□□□□ 0.64
SMG6-215ENST00000574501 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
SMG6-215ENST00000574501 WDR62O43379 1518 aa19.03■□□□□ 0.64
SMG6-215ENST00000574501 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
SMG6-215ENST00000574501 SAMD9Q5K651 1589 aa19.01■□□□□ 0.63
SMG6-215ENST00000574501 CRBNQ96SW2 442 aa19.01■□□□□ 0.63
SMG6-215ENST00000574501 MYBBP1AQ9BQG0 1328 aaKnown RBP19■□□□□ 0.63
SMG6-215ENST00000574501 CUL7Q14999 1698 aa19■□□□□ 0.63
SMG6-215ENST00000574501 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
SMG6-215ENST00000574501 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
SMG6-215ENST00000574501 FRAT2O75474 233 aaPredicted RBP18.98■□□□□ 0.63
SMG6-215ENST00000574501 ARID4BQ4LE39 1312 aaPredicted RBP18.96■□□□□ 0.63
SMG6-215ENST00000574501 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
SMG6-215ENST00000574501 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
SMG6-215ENST00000574501 ZNF644Q9H582 1327 aaPredicted RBP18.94■□□□□ 0.62
SMG6-215ENST00000574501 PDE3BQ13370 1112 aa18.94■□□□□ 0.62
SMG6-215ENST00000574501 RALBP1Q15311 655 aa18.94■□□□□ 0.62
SMG6-215ENST00000574501 KDM5CP41229 1560 aa18.94■□□□□ 0.62
SMG6-215ENST00000574501 DAPK1P53355 1430 aa18.93■□□□□ 0.62
SMG6-215ENST00000574501 C20orf194Q5TEA3 1177 aa18.93■□□□□ 0.62
SMG6-215ENST00000574501 CARD11Q9BXL7 1154 aa18.93■□□□□ 0.62
SMG6-215ENST00000574501 MBD5Q9P267 1494 aa18.92■□□□□ 0.62
SMG6-215ENST00000574501 RSPH6AQ9H0K4 717 aa18.92■□□□□ 0.62
SMG6-215ENST00000574501 ST20-MTHFSA0A0A6YYL1 179 aa18.91■□□□□ 0.62
SMG6-215ENST00000574501 ROCK1Q13464 1354 aa18.9■□□□□ 0.62
SMG6-215ENST00000574501 FAM43AQ8N2R8 423 aa18.9■□□□□ 0.62
SMG6-215ENST00000574501 CDK13Q14004 1512 aaKnown RBP18.9■□□□□ 0.62
SMG6-215ENST00000574501 ABCC5O15440 1437 aa18.89■□□□□ 0.61
SMG6-215ENST00000574501 TDRD9Q8NDG6 1382 aaKnown RBP18.89■□□□□ 0.61
SMG6-215ENST00000574501 NLRP13Q86W25 1043 aa18.88■□□□□ 0.61
SMG6-215ENST00000574501 EPRSP07814 1512 aaKnown RBP18.88■□□□□ 0.61
SMG6-215ENST00000574501 C8orf34Q49A92 452 aa18.88■□□□□ 0.61
SMG6-215ENST00000574501 PZPP20742 1482 aa18.87■□□□□ 0.61
SMG6-215ENST00000574501 KIF14Q15058 1648 aa18.87■□□□□ 0.61
SMG6-215ENST00000574501 PKD2Q13563 968 aa18.86■□□□□ 0.61
SMG6-215ENST00000574501 FAM161AQ3B820 660 aa18.86■□□□□ 0.61
SMG6-215ENST00000574501 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms