RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 CCDC18Q5T9S5 1454 aa15.83■□□□□ 0.12
PCDHGA9-201ENST00000573521 B4GALNT3Q6L9W6 998 aa15.82■□□□□ 0.12
PCDHGA9-201ENST00000573521 RCAN3Q9UKA8 241 aa15.82■□□□□ 0.12
PCDHGA9-201ENST00000573521 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
PCDHGA9-201ENST00000573521 MPHOSPH9Q99550 1183 aa15.81■□□□□ 0.12
PCDHGA9-201ENST00000573521 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
PCDHGA9-201ENST00000573521 HSP90AB1P08238 724 aaKnown RBP15.81■□□□□ 0.12
PCDHGA9-201ENST00000573521 MCCP23508 829 aa15.8■□□□□ 0.12
PCDHGA9-201ENST00000573521 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
PCDHGA9-201ENST00000573521 PMFBP1Q8TBY8 1022 aa15.8■□□□□ 0.12
PCDHGA9-201ENST00000573521 GBP4Q96PP9 640 aa15.79■□□□□ 0.12
PCDHGA9-201ENST00000573521 RWDD1Q9H446 243 aaPredicted RBP15.79■□□□□ 0.12
PCDHGA9-201ENST00000573521 DEKP35659 375 aaKnown RBP15.79■□□□□ 0.12
PCDHGA9-201ENST00000573521 DCAF11Q8TEB1 546 aa15.79■□□□□ 0.12
PCDHGA9-201ENST00000573521 KANK4Q5T7N3 995 aaPredicted RBP15.78■□□□□ 0.12
PCDHGA9-201ENST00000573521 IPO9Q96P70 1041 aaKnown RBP15.78■□□□□ 0.12
PCDHGA9-201ENST00000573521 UNC13AQ9UPW8 1703 aa15.78■□□□□ 0.12
PCDHGA9-201ENST00000573521 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.12
PCDHGA9-201ENST00000573521 STAC3Q96MF2 364 aa15.77■□□□□ 0.11
PCDHGA9-201ENST00000573521 CDK11BP21127 795 aaKnown RBP15.76■□□□□ 0.11
PCDHGA9-201ENST00000573521 KIF15Q9NS87 1388 aa15.76■□□□□ 0.11
PCDHGA9-201ENST00000573521 RGS3P49796 1198 aa15.76■□□□□ 0.11
PCDHGA9-201ENST00000573521 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
PCDHGA9-201ENST00000573521 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
PCDHGA9-201ENST00000573521 CHAF1AQ13111 956 aaPredicted RBP15.75■□□□□ 0.11
PCDHGA9-201ENST00000573521 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
PCDHGA9-201ENST00000573521 PKD2Q13563 968 aa15.75■□□□□ 0.11
PCDHGA9-201ENST00000573521 RUSC2Q8N2Y8 1516 aa15.74■□□□□ 0.11
PCDHGA9-201ENST00000573521 ZBED9Q6R2W3 1325 aa15.73■□□□□ 0.11
PCDHGA9-201ENST00000573521 POGKQ9P215 609 aa15.73■□□□□ 0.11
PCDHGA9-201ENST00000573521 DNTTIP2Q5QJE6 756 aaKnown RBP15.73■□□□□ 0.11
PCDHGA9-201ENST00000573521 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
PCDHGA9-201ENST00000573521 HDAC5Q9UQL6 1122 aa15.73■□□□□ 0.11
PCDHGA9-201ENST00000573521 AAMPQ13685 434 aa15.72■□□□□ 0.11
PCDHGA9-201ENST00000573521 NAP1L5Q96NT1 182 aaPredicted RBP15.72■□□□□ 0.11
PCDHGA9-201ENST00000573521 LAS1LQ9Y4W2 734 aaKnown RBP15.72■□□□□ 0.11
PCDHGA9-201ENST00000573521 MORC1Q86VD1 984 aa15.72■□□□□ 0.11
PCDHGA9-201ENST00000573521 MSNP26038 577 aaKnown RBP15.71■□□□□ 0.11
PCDHGA9-201ENST00000573521 FRAT1Q92837 279 aaPredicted RBP15.71■□□□□ 0.11
PCDHGA9-201ENST00000573521 CC2D1BQ5T0F9 858 aaKnown RBP15.7■□□□□ 0.1
PCDHGA9-201ENST00000573521 SYAP1Q96A49 352 aaPredicted RBP15.7■□□□□ 0.1
PCDHGA9-201ENST00000573521 ARXQ96QS3 562 aa15.69■□□□□ 0.1
PCDHGA9-201ENST00000573521 MYBBP1AQ9BQG0 1328 aaKnown RBP15.69■□□□□ 0.1
PCDHGA9-201ENST00000573521 NUP155O75694 1391 aa15.69■□□□□ 0.1
PCDHGA9-201ENST00000573521 GOLGA2Q08379 1002 aa15.68■□□□□ 0.1
PCDHGA9-201ENST00000573521 EFCAB2Q5VUJ9 269 aa15.68■□□□□ 0.1
PCDHGA9-201ENST00000573521 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
PCDHGA9-201ENST00000573521 HTATSF1O43719 755 aaKnown RBP15.67■□□□□ 0.1
PCDHGA9-201ENST00000573521 CUX1P39880 1505 aa15.67■□□□□ 0.1
PCDHGA9-201ENST00000573521 HDGFL2Q7Z4V5 671 aaPredicted RBP15.66■□□□□ 0.1
PCDHGA9-201ENST00000573521 CENPQQ7L2Z9 268 aaPredicted RBP15.65■□□□□ 0.1
PCDHGA9-201ENST00000573521 L3MBTL2Q969R5 705 aa15.64■□□□□ 0.09
PCDHGA9-201ENST00000573521 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
PCDHGA9-201ENST00000573521 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
PCDHGA9-201ENST00000573521 KIF21BO75037 1637 aa15.63■□□□□ 0.09
PCDHGA9-201ENST00000573521 GOLGA6L4A6NEF3 574 aa15.63■□□□□ 0.09
PCDHGA9-201ENST00000573521 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
PCDHGA9-201ENST00000573521 CFTRP13569 1480 aa15.62■□□□□ 0.09
PCDHGA9-201ENST00000573521 U2SURPO15042 1029 aaKnown RBP15.61■□□□□ 0.09
PCDHGA9-201ENST00000573521 NEUROD2Q15784 382 aa15.61■□□□□ 0.09
PCDHGA9-201ENST00000573521 CGNL1Q0VF96 1302 aa15.6■□□□□ 0.09
PCDHGA9-201ENST00000573521 PRKRIP1Q9H875 184 aaPredicted RBP15.6■□□□□ 0.09
PCDHGA9-201ENST00000573521 DDX11L8A8MPP1 907 aa15.6■□□□□ 0.09
PCDHGA9-201ENST00000573521 KIAA2012Q0VF49 1180 aa15.6■□□□□ 0.09
PCDHGA9-201ENST00000573521 HMMRO75330 724 aa15.59■□□□□ 0.09
PCDHGA9-201ENST00000573521 SKOR2Q2VWA4 1001 aaPredicted RBP15.59■□□□□ 0.09
PCDHGA9-201ENST00000573521 MIA2Q96PC5 1412 aa15.59■□□□□ 0.09
PCDHGA9-201ENST00000573521 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
PCDHGA9-201ENST00000573521 CHMP4CQ96CF2 233 aa15.59■□□□□ 0.09
PCDHGA9-201ENST00000573521 GOLGA6L3A6NEY3 463 aa15.58■□□□□ 0.08
PCDHGA9-201ENST00000573521 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.08
PCDHGA9-201ENST00000573521 TERF2IPQ9NYB0 399 aa15.57■□□□□ 0.08
PCDHGA9-201ENST00000573521 MYOM3Q5VTT5 1437 aa15.56■□□□□ 0.08
PCDHGA9-201ENST00000573521 CENPJQ9HC77 1338 aaPredicted RBP15.56■□□□□ 0.08
PCDHGA9-201ENST00000573521 PHF14O94880 888 aa15.56■□□□□ 0.08
PCDHGA9-201ENST00000573521 FHOD3Q2V2M9 1422 aa15.56■□□□□ 0.08
PCDHGA9-201ENST00000573521 FAM161AQ3B820 660 aa15.56■□□□□ 0.08
PCDHGA9-201ENST00000573521 KCNJ4P48050 445 aa15.55■□□□□ 0.08
PCDHGA9-201ENST00000573521 E9PSI1 815 aa15.55■□□□□ 0.08
PCDHGA9-201ENST00000573521 RSPH6AQ9H0K4 717 aa15.55■□□□□ 0.08
PCDHGA9-201ENST00000573521 OS9Q13438 667 aaPredicted RBP15.55■□□□□ 0.08
PCDHGA9-201ENST00000573521 KIAA1211Q6ZU35 1233 aa15.54■□□□□ 0.08
PCDHGA9-201ENST00000573521 CCDC144AA2RUR9 1427 aa15.54■□□□□ 0.08
PCDHGA9-201ENST00000573521 FGD1P98174 961 aa15.54■□□□□ 0.08
PCDHGA9-201ENST00000573521 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
PCDHGA9-201ENST00000573521 RRBP1Q9P2E9 1410 aaKnown RBP15.53■□□□□ 0.08
PCDHGA9-201ENST00000573521 WASHC2AQ641Q2 1341 aa15.53■□□□□ 0.08
PCDHGA9-201ENST00000573521 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
PCDHGA9-201ENST00000573521 SRPK2P78362 688 aaKnown RBP15.53■□□□□ 0.08
PCDHGA9-201ENST00000573521 CCDC34Q96HJ3 373 aa15.51■□□□□ 0.07
PCDHGA9-201ENST00000573521 RRP1P56182 461 aaKnown RBP15.51■□□□□ 0.07
PCDHGA9-201ENST00000573521 FGD6Q6ZV73 1430 aa15.5■□□□□ 0.07
PCDHGA9-201ENST00000573521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCDHGA9-201ENST00000573521 U2AF1L5P0DN76 240 aaPredicted RBP15.49■□□□□ 0.07
PCDHGA9-201ENST00000573521 U2AF1Q01081 240 aaKnown RBP eCLIP15.49■□□□□ 0.07
PCDHGA9-201ENST00000573521 USP47Q96K76 1375 aa15.49■□□□□ 0.07
PCDHGA9-201ENST00000573521 CNTLNQ9NXG0 1405 aa15.49■□□□□ 0.07
PCDHGA9-201ENST00000573521 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
PCDHGA9-201ENST00000573521 FYCO1Q9BQS8 1478 aa15.48■□□□□ 0.07
PCDHGA9-201ENST00000573521 C14orf37Q86TY3 774 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms