RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 EFCAB2Q5VUJ9 269 aa20.58■□□□□ 0.89
SMIM28-201ENST00000573100 SIGLEC1Q9BZZ2 1709 aa20.58■□□□□ 0.88
SMIM28-201ENST00000573100 ATP10AO60312 1499 aa20.57■□□□□ 0.88
SMIM28-201ENST00000573100 CEBPAP49715 358 aaPredicted RBP20.57■□□□□ 0.88
SMIM28-201ENST00000573100 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
SMIM28-201ENST00000573100 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
SMIM28-201ENST00000573100 FER1L4A9Z1Z3 1794 aa20.54■□□□□ 0.88
SMIM28-201ENST00000573100 CDK13Q14004 1512 aaKnown RBP20.53■□□□□ 0.88
SMIM28-201ENST00000573100 CDK11AQ9UQ88 783 aaPredicted RBP20.52■□□□□ 0.88
SMIM28-201ENST00000573100 ARHGEF12Q9NZN5 1544 aa20.52■□□□□ 0.87
SMIM28-201ENST00000573100 C9orf84Q5VXU9 1444 aa20.52■□□□□ 0.87
SMIM28-201ENST00000573100 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
SMIM28-201ENST00000573100 MYT1LQ9UL68 1186 aa20.49■□□□□ 0.87
SMIM28-201ENST00000573100 AFAP1Q8N556 730 aa20.48■□□□□ 0.87
SMIM28-201ENST00000573100 ILDR2Q71H61 639 aa20.47■□□□□ 0.87
SMIM28-201ENST00000573100 PREX1Q8TCU6 1659 aa20.45■□□□□ 0.86
SMIM28-201ENST00000573100 UHRF1BP1Q6BDS2 1440 aa20.44■□□□□ 0.86
SMIM28-201ENST00000573100 SOCS7O14512 581 aa20.44■□□□□ 0.86
SMIM28-201ENST00000573100 SETD1BQ9UPS6 1966 aaKnown RBP20.43■□□□□ 0.86
SMIM28-201ENST00000573100 UBTFP17480 764 aaKnown RBP20.43■□□□□ 0.86
SMIM28-201ENST00000573100 FMN1Q68DA7 1419 aa20.43■□□□□ 0.86
SMIM28-201ENST00000573100 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
SMIM28-201ENST00000573100 ESF1Q9H501 851 aaKnown RBP20.41■□□□□ 0.86
SMIM28-201ENST00000573100 EHMT2Q96KQ7 1210 aa20.4■□□□□ 0.86
SMIM28-201ENST00000573100 STRCQ7RTU9 1775 aa20.39■□□□□ 0.86
SMIM28-201ENST00000573100 MYO5CQ9NQX4 1742 aa20.39■□□□□ 0.86
SMIM28-201ENST00000573100 ARHGAP5Q13017 1502 aa20.37■□□□□ 0.85
SMIM28-201ENST00000573100 PTPRTO14522 1441 aa20.36■□□□□ 0.85
SMIM28-201ENST00000573100 TROQ12816 1431 aaPredicted RBP20.36■□□□□ 0.85
SMIM28-201ENST00000573100 CLIP1P30622 1438 aa20.35■□□□□ 0.85
SMIM28-201ENST00000573100 KIF14Q15058 1648 aa20.35■□□□□ 0.85
SMIM28-201ENST00000573100 KDM5CP41229 1560 aa20.34■□□□□ 0.85
SMIM28-201ENST00000573100 ARHGAP35Q9NRY4 1499 aa20.32■□□□□ 0.84
SMIM28-201ENST00000573100 MLH3Q9UHC1 1453 aa20.32■□□□□ 0.84
SMIM28-201ENST00000573100 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
SMIM28-201ENST00000573100 DIP2CQ9Y2E4 1556 aa20.31■□□□□ 0.84
SMIM28-201ENST00000573100 REREQ9P2R6 1566 aa20.3■□□□□ 0.84
SMIM28-201ENST00000573100 AGLP35573 1532 aa20.27■□□□□ 0.84
SMIM28-201ENST00000573100 C3P01024 1663 aa20.26■□□□□ 0.83
SMIM28-201ENST00000573100 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
SMIM28-201ENST00000573100 LTBP4Q8N2S1 1624 aa20.25■□□□□ 0.83
SMIM28-201ENST00000573100 CNTLNQ9NXG0 1405 aa20.25■□□□□ 0.83
SMIM28-201ENST00000573100 NCOA1Q15788 1441 aa20.24■□□□□ 0.83
SMIM28-201ENST00000573100 IQSEC2Q5JU85 1478 aa20.23■□□□□ 0.83
SMIM28-201ENST00000573100 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
SMIM28-201ENST00000573100 SPATA31D1Q6ZQQ2 1576 aa20.22■□□□□ 0.83
SMIM28-201ENST00000573100 ABCC1P33527 1531 aa20.2■□□□□ 0.82
SMIM28-201ENST00000573100 ZMYM3Q14202 1370 aa20.2■□□□□ 0.82
SMIM28-201ENST00000573100 ZNF777Q9ULD5 760 aaPredicted RBP20.19■□□□□ 0.82
SMIM28-201ENST00000573100 NCKAP5LQ9HCH0 1330 aa20.19■□□□□ 0.82
SMIM28-201ENST00000573100 NPATQ14207 1427 aa20.19■□□□□ 0.82
SMIM28-201ENST00000573100 UBAP1LF5GYI3 381 aa20.17■□□□□ 0.82
SMIM28-201ENST00000573100 PREX2Q70Z35 1606 aa20.16■□□□□ 0.82
SMIM28-201ENST00000573100 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
SMIM28-201ENST00000573100 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
SMIM28-201ENST00000573100 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
SMIM28-201ENST00000573100 ZNF335Q9H4Z2 1342 aaPredicted RBP20.15■□□□□ 0.82
SMIM28-201ENST00000573100 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
SMIM28-201ENST00000573100 LRRIQ1Q96JM4 1722 aa20.15■□□□□ 0.82
SMIM28-201ENST00000573100 ITSN2Q9NZM3 1697 aa20.14■□□□□ 0.81
SMIM28-201ENST00000573100 CCDC18Q5T9S5 1454 aa20.14■□□□□ 0.81
SMIM28-201ENST00000573100 HNRNPMP52272 730 aaKnown RBP eCLIP20.14■□□□□ 0.81
SMIM28-201ENST00000573100 PKD2Q13563 968 aa20.14■□□□□ 0.81
SMIM28-201ENST00000573100 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
SMIM28-201ENST00000573100 GGT6Q6P531 493 aa20.09■□□□□ 0.81
SMIM28-201ENST00000573100 MROH2AA6NES4 1674 aa20.08■□□□□ 0.81
SMIM28-201ENST00000573100 CFDP1Q9UEE9 299 aaPredicted RBP20.07■□□□□ 0.8
SMIM28-201ENST00000573100 CDC42BPAQ5VT25 1732 aa20.07■□□□□ 0.8
SMIM28-201ENST00000573100 GPATCH8Q9UKJ3 1502 aaKnown RBP20.07■□□□□ 0.8
SMIM28-201ENST00000573100 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
SMIM28-201ENST00000573100 PLA2R1Q13018 1463 aa20.05■□□□□ 0.8
SMIM28-201ENST00000573100 PTPRKQ15262 1439 aa20.04■□□□□ 0.8
SMIM28-201ENST00000573100 KIAA1107Q9UPP5 1409 aa20.04■□□□□ 0.8
SMIM28-201ENST00000573100 SYCP2Q9BX26 1530 aa20.04■□□□□ 0.8
SMIM28-201ENST00000573100 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
SMIM28-201ENST00000573100 SUPT6HQ7KZ85 1726 aaKnown RBP20.04■□□□□ 0.8
SMIM28-201ENST00000573100 A2MP01023 1474 aa20.03■□□□□ 0.8
SMIM28-201ENST00000573100 TCOF1Q13428 1488 aaKnown RBP20.02■□□□□ 0.8
SMIM28-201ENST00000573100 PLEKHH2Q8IVE3 1493 aa20.01■□□□□ 0.79
SMIM28-201ENST00000573100 ATP7AQ04656 1500 aa20.01■□□□□ 0.79
SMIM28-201ENST00000573100 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
SMIM28-201ENST00000573100 FYCO1Q9BQS8 1478 aa20■□□□□ 0.79
SMIM28-201ENST00000573100 CEP170BQ9Y4F5 1589 aaPredicted RBP20■□□□□ 0.79
SMIM28-201ENST00000573100 CCNB3Q8WWL7 1395 aa19.99■□□□□ 0.79
SMIM28-201ENST00000573100 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
SMIM28-201ENST00000573100 MYO3AQ8NEV4 1616 aa19.98■□□□□ 0.79
SMIM28-201ENST00000573100 PLXNC1O60486 1568 aa19.97■□□□□ 0.79
SMIM28-201ENST00000573100 HSPA1LP34931 641 aa19.97■□□□□ 0.79
SMIM28-201ENST00000573100 PIP4K2BP78356 416 aa19.97■□□□□ 0.79
SMIM28-201ENST00000573100 TOM1O60784 492 aa19.96■□□□□ 0.79
SMIM28-201ENST00000573100 ZNF142P52746 1687 aaPredicted RBP19.96■□□□□ 0.79
SMIM28-201ENST00000573100 INO80Q9ULG1 1556 aaPredicted RBP19.94■□□□□ 0.78
SMIM28-201ENST00000573100 A2ML1A8K2U0 1454 aa19.93■□□□□ 0.78
SMIM28-201ENST00000573100 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
SMIM28-201ENST00000573100 FBXO31Q5XUX0 539 aaPredicted RBP19.91■□□□□ 0.78
SMIM28-201ENST00000573100 MTUS2Q5JR59 1369 aa19.91■□□□□ 0.78
SMIM28-201ENST00000573100 DHX29Q7Z478 1369 aaKnown RBP19.89■□□□□ 0.77
SMIM28-201ENST00000573100 ANKLE2Q86XL3 938 aa19.89■□□□□ 0.77
SMIM28-201ENST00000573100 DNMT1P26358 1616 aaKnown RBP19.88■□□□□ 0.77
SMIM28-201ENST00000573100 TNRQ92752 1358 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms