RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 HECW1Q76N89 1606 aa35.03■■■■□ 3.2
UBFD1-210ENST00000571064 UBTFP17480 764 aaKnown RBP35■■■■□ 3.19
UBFD1-210ENST00000571064 FER1L4A9Z1Z3 1794 aa35■■■■□ 3.19
UBFD1-210ENST00000571064 SCAPERQ9BY12 1400 aa34.98■■■■□ 3.19
UBFD1-210ENST00000571064 CDK13Q14004 1512 aaKnown RBP34.96■■■■□ 3.19
UBFD1-210ENST00000571064 PLCH2O75038 1416 aa34.93■■■■□ 3.18
UBFD1-210ENST00000571064 LOC105371045A0A1W2PR82 267 aa34.89■■■■□ 3.18
UBFD1-210ENST00000571064 ARHGEF12Q9NZN5 1544 aa34.89■■■■□ 3.18
UBFD1-210ENST00000571064 ATP10AO60312 1499 aa34.89■■■■□ 3.18
UBFD1-210ENST00000571064 CEBPAP49715 358 aaPredicted RBP34.88■■■■□ 3.17
UBFD1-210ENST00000571064 C9orf84Q5VXU9 1444 aa34.85■■■■□ 3.17
UBFD1-210ENST00000571064 PREX1Q8TCU6 1659 aa34.82■■■■□ 3.17
UBFD1-210ENST00000571064 EFCAB2Q5VUJ9 269 aa34.81■■■■□ 3.16
UBFD1-210ENST00000571064 ATP1B4Q9UN42 357 aaPredicted RBP34.79■■■■□ 3.16
UBFD1-210ENST00000571064 MYO5CQ9NQX4 1742 aa34.75■■■■□ 3.15
UBFD1-210ENST00000571064 STRCQ7RTU9 1775 aa34.74■■■■□ 3.15
UBFD1-210ENST00000571064 DISP3Q9P2K9 1392 aa34.73■■■■□ 3.15
UBFD1-210ENST00000571064 ILDR2Q71H61 639 aa34.72■■■■□ 3.15
UBFD1-210ENST00000571064 AFAP1Q8N556 730 aa34.71■■■■□ 3.15
UBFD1-210ENST00000571064 DMRT2Q9Y5R5 561 aa34.71■■■■□ 3.15
UBFD1-210ENST00000571064 UHRF1BP1Q6BDS2 1440 aa34.69■■■■□ 3.14
UBFD1-210ENST00000571064 ZNF518AQ6AHZ1 1483 aa34.69■■■■□ 3.14
UBFD1-210ENST00000571064 KIF14Q15058 1648 aa34.69■■■■□ 3.14
UBFD1-210ENST00000571064 MYT1LQ9UL68 1186 aa34.66■■■■□ 3.14
UBFD1-210ENST00000571064 CDK11AQ9UQ88 783 aaPredicted RBP34.65■■■■□ 3.14
UBFD1-210ENST00000571064 KDM5CP41229 1560 aa34.64■■■■□ 3.14
UBFD1-210ENST00000571064 ARHGAP5Q13017 1502 aa34.64■■■■□ 3.14
UBFD1-210ENST00000571064 ARHGAP35Q9NRY4 1499 aa34.64■■■■□ 3.14
UBFD1-210ENST00000571064 FMN1Q68DA7 1419 aa34.64■■■■□ 3.14
UBFD1-210ENST00000571064 DIP2CQ9Y2E4 1556 aa34.6■■■■□ 3.13
UBFD1-210ENST00000571064 SETD1BQ9UPS6 1966 aaKnown RBP34.6■■■■□ 3.13
UBFD1-210ENST00000571064 TROQ12816 1431 aaPredicted RBP34.58■■■■□ 3.13
UBFD1-210ENST00000571064 SOCS7O14512 581 aa34.57■■■■□ 3.12
UBFD1-210ENST00000571064 CLIP1P30622 1438 aa34.55■■■■□ 3.12
UBFD1-210ENST00000571064 PTPRTO14522 1441 aa34.53■■■■□ 3.12
UBFD1-210ENST00000571064 CEP162Q5TB80 1403 aa34.53■■■■□ 3.12
UBFD1-210ENST00000571064 C3P01024 1663 aa34.53■■■■□ 3.12
UBFD1-210ENST00000571064 REREQ9P2R6 1566 aa34.53■■■■□ 3.12
UBFD1-210ENST00000571064 ABCA6Q8N139 1617 aa34.52■■■■□ 3.12
UBFD1-210ENST00000571064 MLH3Q9UHC1 1453 aa34.49■■■■□ 3.11
UBFD1-210ENST00000571064 ESF1Q9H501 851 aaKnown RBP34.48■■■■□ 3.11
UBFD1-210ENST00000571064 CDC42BPBQ9Y5S2 1711 aa34.47■■■■□ 3.11
UBFD1-210ENST00000571064 TRAPPC8Q9Y2L5 1435 aa34.47■■■■□ 3.11
UBFD1-210ENST00000571064 LRRIQ1Q96JM4 1722 aa34.45■■■■□ 3.11
UBFD1-210ENST00000571064 AGLP35573 1532 aa34.44■■■■□ 3.1
UBFD1-210ENST00000571064 LTBP4Q8N2S1 1624 aa34.44■■■■□ 3.1
UBFD1-210ENST00000571064 SPATA31D1Q6ZQQ2 1576 aa34.42■■■■□ 3.1
UBFD1-210ENST00000571064 ABCC1P33527 1531 aa34.4■■■■□ 3.1
UBFD1-210ENST00000571064 NCOA1Q15788 1441 aa34.37■■■■□ 3.09
UBFD1-210ENST00000571064 PREX2Q70Z35 1606 aa34.37■■■■□ 3.09
UBFD1-210ENST00000571064 ITSN2Q9NZM3 1697 aa34.35■■■■□ 3.09
UBFD1-210ENST00000571064 KIDINS220Q9ULH0 1771 aa34.34■■■■□ 3.09
UBFD1-210ENST00000571064 CNTLNQ9NXG0 1405 aa34.32■■■■□ 3.08
UBFD1-210ENST00000571064 IQSEC2Q5JU85 1478 aa34.3■■■■□ 3.08
UBFD1-210ENST00000571064 CAMSAP1Q5T5Y3 1602 aa34.27■■■■□ 3.08
UBFD1-210ENST00000571064 NPATQ14207 1427 aa34.22■■■■□ 3.07
UBFD1-210ENST00000571064 CDC42BPAQ5VT25 1732 aa34.22■■■■□ 3.07
UBFD1-210ENST00000571064 NCKAP5LQ9HCH0 1330 aa34.22■■■■□ 3.07
UBFD1-210ENST00000571064 ZMYM3Q14202 1370 aa34.22■■■■□ 3.07
UBFD1-210ENST00000571064 CCDC18Q5T9S5 1454 aa34.21■■■■□ 3.07
UBFD1-210ENST00000571064 SAMD9LQ8IVG5 1584 aa34.21■■■■□ 3.07
UBFD1-210ENST00000571064 ZNF777Q9ULD5 760 aaPredicted RBP34.21■■■■□ 3.07
UBFD1-210ENST00000571064 CASKIN1Q8WXD9 1431 aa34.21■■■■□ 3.07
UBFD1-210ENST00000571064 ZNF335Q9H4Z2 1342 aaPredicted RBP34.19■■■■□ 3.06
UBFD1-210ENST00000571064 MROH2AA6NES4 1674 aa34.19■■■■□ 3.06
UBFD1-210ENST00000571064 SPAG9O60271 1321 aaKnown RBP34.14■■■■□ 3.06
UBFD1-210ENST00000571064 SUPT6HQ7KZ85 1726 aaKnown RBP34.13■■■■□ 3.05
UBFD1-210ENST00000571064 UBAP1LF5GYI3 381 aa34.13■■■■□ 3.05
UBFD1-210ENST00000571064 HNRNPMP52272 730 aaKnown RBP eCLIP34.13■■■■□ 3.05
UBFD1-210ENST00000571064 SYCP2Q9BX26 1530 aa34.13■■■■□ 3.05
UBFD1-210ENST00000571064 CLTCQ00610 1675 aaKnown RBP34.08■■■■□ 3.05
UBFD1-210ENST00000571064 FYCO1Q9BQS8 1478 aa34.07■■■■□ 3.05
UBFD1-210ENST00000571064 GPATCH8Q9UKJ3 1502 aaKnown RBP34.07■■■■□ 3.04
UBFD1-210ENST00000571064 VPS8Q8N3P4 1428 aa34.06■■■■□ 3.04
UBFD1-210ENST00000571064 MYO3AQ8NEV4 1616 aa34.05■■■■□ 3.04
UBFD1-210ENST00000571064 PKD2Q13563 968 aa34.05■■■■□ 3.04
UBFD1-210ENST00000571064 ATP7AQ04656 1500 aa34.04■■■■□ 3.04
UBFD1-210ENST00000571064 PLA2R1Q13018 1463 aa34.04■■■■□ 3.04
UBFD1-210ENST00000571064 PTPRKQ15262 1439 aa34.04■■■■□ 3.04
UBFD1-210ENST00000571064 ZNF142P52746 1687 aaPredicted RBP34.03■■■■□ 3.04
UBFD1-210ENST00000571064 GGT6Q6P531 493 aa34.02■■■■□ 3.04
UBFD1-210ENST00000571064 CEP170BQ9Y4F5 1589 aaPredicted RBP34.02■■■■□ 3.04
UBFD1-210ENST00000571064 A2MP01023 1474 aa34.01■■■■□ 3.04
UBFD1-210ENST00000571064 PLXNC1O60486 1568 aa34.01■■■■□ 3.03
UBFD1-210ENST00000571064 TCOF1Q13428 1488 aaKnown RBP34.01■■■■□ 3.03
UBFD1-210ENST00000571064 INO80Q9ULG1 1556 aaPredicted RBP33.98■■■■□ 3.03
UBFD1-210ENST00000571064 KIAA1107Q9UPP5 1409 aa33.97■■■■□ 3.03
UBFD1-210ENST00000571064 CFDP1Q9UEE9 299 aaPredicted RBP33.97■■■■□ 3.03
UBFD1-210ENST00000571064 PPP6R1Q9UPN7 881 aa33.94■■■■□ 3.02
UBFD1-210ENST00000571064 PLEKHH2Q8IVE3 1493 aa33.93■■■■□ 3.02
UBFD1-210ENST00000571064 CCNB3Q8WWL7 1395 aa33.89■■■■□ 3.02
UBFD1-210ENST00000571064 A2ML1A8K2U0 1454 aa33.85■■■■□ 3.01
UBFD1-210ENST00000571064 SCAF1Q9H7N4 1312 aaKnown RBP33.84■■■■□ 3.01
UBFD1-210ENST00000571064 ZNF644Q9H582 1327 aaPredicted RBP33.83■■■■□ 3.01
UBFD1-210ENST00000571064 DNMT1P26358 1616 aaKnown RBP33.83■■■■□ 3.01
UBFD1-210ENST00000571064 HSPA1LP34931 641 aa33.83■■■■□ 3.01
UBFD1-210ENST00000571064 ADGBQ8N7X0 1667 aa33.82■■■■□ 3
UBFD1-210ENST00000571064 PIP4K2BP78356 416 aa33.81■■■■□ 3
UBFD1-210ENST00000571064 MTUS2Q5JR59 1369 aa33.77■■■■□ 3
UBFD1-210ENST00000571064 FBXO31Q5XUX0 539 aaPredicted RBP33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms