RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 EFCAB5A4FU69 1503 aa12.59□□□□□ -0.39
SMG6-205ENST00000570659 CDK13Q14004 1512 aaKnown RBP12.59□□□□□ -0.39
SMG6-205ENST00000570659 RANGAP1P46060 587 aaPredicted RBP12.58□□□□□ -0.4
SMG6-205ENST00000570659 POGZQ7Z3K3 1410 aa12.58□□□□□ -0.4
SMG6-205ENST00000570659 SCAPERQ9BY12 1400 aa12.56□□□□□ -0.4
SMG6-205ENST00000570659 C3P01024 1663 aa12.55□□□□□ -0.4
SMG6-205ENST00000570659 CFAP74Q9C0B2 1584 aa12.55□□□□□ -0.4
SMG6-205ENST00000570659 ATP10AO60312 1499 aa12.54□□□□□ -0.4
SMG6-205ENST00000570659 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
SMG6-205ENST00000570659 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
SMG6-205ENST00000570659 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.4
SMG6-205ENST00000570659 KIF14Q15058 1648 aa12.52□□□□□ -0.4
SMG6-205ENST00000570659 ABCA6Q8N139 1617 aa12.51□□□□□ -0.41
SMG6-205ENST00000570659 PLCH2O75038 1416 aa12.51□□□□□ -0.41
SMG6-205ENST00000570659 PTPRTO14522 1441 aa12.5□□□□□ -0.41
SMG6-205ENST00000570659 UHRF1BP1Q6BDS2 1440 aa12.49□□□□□ -0.41
SMG6-205ENST00000570659 PLEKHD1A6NEE1 506 aa12.49□□□□□ -0.41
SMG6-205ENST00000570659 KDM5CP41229 1560 aa12.48□□□□□ -0.41
SMG6-205ENST00000570659 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
SMG6-205ENST00000570659 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
SMG6-205ENST00000570659 LRRIQ1Q96JM4 1722 aa12.46□□□□□ -0.41
SMG6-205ENST00000570659 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
SMG6-205ENST00000570659 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
SMG6-205ENST00000570659 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
SMG6-205ENST00000570659 CAMSAP1Q5T5Y3 1602 aa12.44□□□□□ -0.42
SMG6-205ENST00000570659 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
SMG6-205ENST00000570659 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
SMG6-205ENST00000570659 TRAPPC8Q9Y2L5 1435 aa12.43□□□□□ -0.42
SMG6-205ENST00000570659 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
SMG6-205ENST00000570659 REREQ9P2R6 1566 aa12.42□□□□□ -0.42
SMG6-205ENST00000570659 CDC42BPBQ9Y5S2 1711 aa12.42□□□□□ -0.42
SMG6-205ENST00000570659 IQSEC2Q5JU85 1478 aa12.41□□□□□ -0.42
SMG6-205ENST00000570659 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
SMG6-205ENST00000570659 KIDINS220Q9ULH0 1771 aa12.41□□□□□ -0.42
SMG6-205ENST00000570659 ZNF518AQ6AHZ1 1483 aa12.4□□□□□ -0.43
SMG6-205ENST00000570659 ALKQ9UM73 1620 aa12.39□□□□□ -0.43
SMG6-205ENST00000570659 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
SMG6-205ENST00000570659 UBAP1LF5GYI3 381 aa12.38□□□□□ -0.43
SMG6-205ENST00000570659 AGLP35573 1532 aa12.37□□□□□ -0.43
SMG6-205ENST00000570659 HSPA1LP34931 641 aa12.37□□□□□ -0.43
SMG6-205ENST00000570659 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
SMG6-205ENST00000570659 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
SMG6-205ENST00000570659 ABCC1P33527 1531 aa12.37□□□□□ -0.43
SMG6-205ENST00000570659 MLH3Q9UHC1 1453 aa12.36□□□□□ -0.43
SMG6-205ENST00000570659 FAM9AQ8IZU1 332 aaPredicted RBP12.35□□□□□ -0.43
SMG6-205ENST00000570659 MYO3AQ8NEV4 1616 aa12.35□□□□□ -0.43
SMG6-205ENST00000570659 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
SMG6-205ENST00000570659 TCOF1Q13428 1488 aaKnown RBP12.34□□□□□ -0.43
SMG6-205ENST00000570659 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
SMG6-205ENST00000570659 ZNF142P52746 1687 aaPredicted RBP12.33□□□□□ -0.44
SMG6-205ENST00000570659 CLTCQ00610 1675 aaKnown RBP12.33□□□□□ -0.44
SMG6-205ENST00000570659 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.44
SMG6-205ENST00000570659 PREX2Q70Z35 1606 aa12.33□□□□□ -0.44
SMG6-205ENST00000570659 MROH2AA6NES4 1674 aa12.32□□□□□ -0.44
SMG6-205ENST00000570659 SUPT6HQ7KZ85 1726 aaKnown RBP12.31□□□□□ -0.44
SMG6-205ENST00000570659 ATP1B4Q9UN42 357 aaPredicted RBP12.31□□□□□ -0.44
SMG6-205ENST00000570659 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
SMG6-205ENST00000570659 SAMD9LQ8IVG5 1584 aa12.3□□□□□ -0.44
SMG6-205ENST00000570659 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
SMG6-205ENST00000570659 CEP170BQ9Y4F5 1589 aaPredicted RBP12.3□□□□□ -0.44
SMG6-205ENST00000570659 PTPRKQ15262 1439 aa12.3□□□□□ -0.44
SMG6-205ENST00000570659 CDC42BPAQ5VT25 1732 aa12.3□□□□□ -0.44
SMG6-205ENST00000570659 NPATQ14207 1427 aa12.29□□□□□ -0.44
SMG6-205ENST00000570659 MYT1LQ9UL68 1186 aa12.29□□□□□ -0.44
SMG6-205ENST00000570659 PIP4K2BP78356 416 aa12.28□□□□□ -0.44
SMG6-205ENST00000570659 PLA2R1Q13018 1463 aa12.27□□□□□ -0.44
SMG6-205ENST00000570659 PLXNC1O60486 1568 aa12.26□□□□□ -0.45
SMG6-205ENST00000570659 SENP3Q9H4L4 574 aaPredicted RBP12.26□□□□□ -0.45
SMG6-205ENST00000570659 SYCP2Q9BX26 1530 aa12.26□□□□□ -0.45
SMG6-205ENST00000570659 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
SMG6-205ENST00000570659 STRCP1A6NGW2 1772 aa12.25□□□□□ -0.45
SMG6-205ENST00000570659 RGS17Q9UGC6 210 aaPredicted RBP12.25□□□□□ -0.45
SMG6-205ENST00000570659 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
SMG6-205ENST00000570659 CNTLNQ9NXG0 1405 aa12.25□□□□□ -0.45
SMG6-205ENST00000570659 VWDEQ8N2E2 1590 aa12.24□□□□□ -0.45
SMG6-205ENST00000570659 INO80Q9ULG1 1556 aaPredicted RBP12.23□□□□□ -0.45
SMG6-205ENST00000570659 FMN1Q68DA7 1419 aa12.21□□□□□ -0.45
SMG6-205ENST00000570659 POLR1AO95602 1720 aaPredicted RBP12.21□□□□□ -0.45
SMG6-205ENST00000570659 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMG6-205ENST00000570659 ESF1Q9H501 851 aaKnown RBP12.21□□□□□ -0.45
SMG6-205ENST00000570659 PPP6R1Q9UPN7 881 aa12.21□□□□□ -0.45
SMG6-205ENST00000570659 ATP7AQ04656 1500 aa12.21□□□□□ -0.46
SMG6-205ENST00000570659 PKD2Q13563 968 aa12.2□□□□□ -0.46
SMG6-205ENST00000570659 FBXO31Q5XUX0 539 aaPredicted RBP12.2□□□□□ -0.46
SMG6-205ENST00000570659 SHANK2Q9UPX8 1470 aa12.2□□□□□ -0.46
SMG6-205ENST00000570659 A2ML1A8K2U0 1454 aa12.19□□□□□ -0.46
SMG6-205ENST00000570659 EEA1Q15075 1411 aa12.19□□□□□ -0.46
SMG6-205ENST00000570659 GPATCH8Q9UKJ3 1502 aaKnown RBP12.18□□□□□ -0.46
SMG6-205ENST00000570659 ZNF777Q9ULD5 760 aaPredicted RBP12.18□□□□□ -0.46
SMG6-205ENST00000570659 A2MP01023 1474 aa12.18□□□□□ -0.46
SMG6-205ENST00000570659 CLIP1P30622 1438 aa12.18□□□□□ -0.46
SMG6-205ENST00000570659 GGT6Q6P531 493 aa12.16□□□□□ -0.46
SMG6-205ENST00000570659 CPS1P31327 1500 aa12.16□□□□□ -0.46
SMG6-205ENST00000570659 SPAG9O60271 1321 aaKnown RBP12.15□□□□□ -0.46
SMG6-205ENST00000570659 ZNF644Q9H582 1327 aaPredicted RBP12.15□□□□□ -0.46
SMG6-205ENST00000570659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMG6-205ENST00000570659 SETD1AO15047 1707 aaKnown RBP12.14□□□□□ -0.47
SMG6-205ENST00000570659 CDK11AQ9UQ88 783 aaPredicted RBP12.14□□□□□ -0.47
SMG6-205ENST00000570659 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
SMG6-205ENST00000570659 LRRC7Q96NW7 1537 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms