RNA–Protein interactions for RNA: ENST00000570587.5

KCNAB3-202, Transcript of potassium voltage-gated channel subfamily A regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNAB3, Length 2,406 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3-202ENST00000570587 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
KCNAB3-202ENST00000570587 CCDC18Q5T9S5 1454 aa17.95■□□□□ 0.46
KCNAB3-202ENST00000570587 FAM43AQ8N2R8 423 aa17.94■□□□□ 0.46
KCNAB3-202ENST00000570587 CUL7Q14999 1698 aa17.94■□□□□ 0.46
KCNAB3-202ENST00000570587 PDE4AP27815 886 aa17.93■□□□□ 0.46
KCNAB3-202ENST00000570587 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
KCNAB3-202ENST00000570587 MS4A1P11836 297 aa17.92■□□□□ 0.46
KCNAB3-202ENST00000570587 BACH2Q9BYV9 841 aa17.92■□□□□ 0.46
KCNAB3-202ENST00000570587 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
KCNAB3-202ENST00000570587 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
KCNAB3-202ENST00000570587 GAPVD1Q14C86 1478 aa17.91■□□□□ 0.46
KCNAB3-202ENST00000570587 DDRGK1Q96HY6 314 aa17.9■□□□□ 0.46
KCNAB3-202ENST00000570587 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
KCNAB3-202ENST00000570587 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
KCNAB3-202ENST00000570587 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
KCNAB3-202ENST00000570587 GLIPR1L2Q4G1C9 344 aa17.89■□□□□ 0.45
KCNAB3-202ENST00000570587 FRAT1Q92837 279 aaPredicted RBP17.89■□□□□ 0.45
KCNAB3-202ENST00000570587 EFCAB5A4FU69 1503 aa17.88■□□□□ 0.45
KCNAB3-202ENST00000570587 NFKBIBQ15653 356 aa17.88■□□□□ 0.45
KCNAB3-202ENST00000570587 CTTNBP2Q8WZ74 1663 aa17.87■□□□□ 0.45
KCNAB3-202ENST00000570587 CASKIN1Q8WXD9 1431 aa17.86■□□□□ 0.45
KCNAB3-202ENST00000570587 PTPN23Q9H3S7 1636 aa17.86■□□□□ 0.45
KCNAB3-202ENST00000570587 FYCO1Q9BQS8 1478 aa17.86■□□□□ 0.45
KCNAB3-202ENST00000570587 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.44
KCNAB3-202ENST00000570587 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
KCNAB3-202ENST00000570587 SNAPC4Q5SXM2 1469 aa17.81■□□□□ 0.44
KCNAB3-202ENST00000570587 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
KCNAB3-202ENST00000570587 POLR1AO95602 1720 aaPredicted RBP17.79■□□□□ 0.44
KCNAB3-202ENST00000570587 FGD6Q6ZV73 1430 aa17.79■□□□□ 0.44
KCNAB3-202ENST00000570587 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
KCNAB3-202ENST00000570587 NAIPQ13075 1403 aa17.78■□□□□ 0.44
KCNAB3-202ENST00000570587 WDR62O43379 1518 aa17.77■□□□□ 0.44
KCNAB3-202ENST00000570587 SAMD9Q5K651 1589 aa17.76■□□□□ 0.43
KCNAB3-202ENST00000570587 RRP1P56182 461 aaKnown RBP17.76■□□□□ 0.43
KCNAB3-202ENST00000570587 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
KCNAB3-202ENST00000570587 EXOC6Q8TAG9 804 aa17.73■□□□□ 0.43
KCNAB3-202ENST00000570587 KIF7Q2M1P5 1343 aa17.73■□□□□ 0.43
KCNAB3-202ENST00000570587 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
KCNAB3-202ENST00000570587 ZMYND15Q9H091 742 aa17.72■□□□□ 0.43
KCNAB3-202ENST00000570587 MTUS2Q5JR59 1369 aa17.72■□□□□ 0.43
KCNAB3-202ENST00000570587 SPATA31E1Q6ZUB1 1445 aa17.7■□□□□ 0.42
KCNAB3-202ENST00000570587 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
KCNAB3-202ENST00000570587 HECW1Q76N89 1606 aa17.7■□□□□ 0.42
KCNAB3-202ENST00000570587 LRRIQ1Q96JM4 1722 aa17.7■□□□□ 0.42
KCNAB3-202ENST00000570587 DHX29Q7Z478 1369 aaKnown RBP17.7■□□□□ 0.42
KCNAB3-202ENST00000570587 DENND4BO75064 1496 aaPredicted RBP17.68■□□□□ 0.42
KCNAB3-202ENST00000570587 VSIG10Q8N0Z9 540 aa17.68■□□□□ 0.42
KCNAB3-202ENST00000570587 PNISRQ8TF01 805 aaKnown RBP17.67■□□□□ 0.42
KCNAB3-202ENST00000570587 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
KCNAB3-202ENST00000570587 PBRM1Q86U86 1689 aa17.66■□□□□ 0.42
KCNAB3-202ENST00000570587 L3MBTL2Q969R5 705 aa17.65■□□□□ 0.42
KCNAB3-202ENST00000570587 FRAT2O75474 233 aaPredicted RBP17.64■□□□□ 0.41
KCNAB3-202ENST00000570587 RCAN3Q9UKA8 241 aa17.64■□□□□ 0.41
KCNAB3-202ENST00000570587 ADAMTS12P58397 1594 aa17.63■□□□□ 0.41
KCNAB3-202ENST00000570587 IFT140Q96RY7 1462 aa17.63■□□□□ 0.41
KCNAB3-202ENST00000570587 LRPPRCP42704 1394 aaKnown RBP17.62■□□□□ 0.41
KCNAB3-202ENST00000570587 RRP9O43818 475 aaKnown RBP17.62■□□□□ 0.41
KCNAB3-202ENST00000570587 RRAGDQ9NQL2 400 aaPredicted RBP17.62■□□□□ 0.41
KCNAB3-202ENST00000570587 SLC4A3P48751 1232 aa17.62■□□□□ 0.41
KCNAB3-202ENST00000570587 MAGI3Q5TCQ9 1506 aa17.62■□□□□ 0.41
KCNAB3-202ENST00000570587 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
KCNAB3-202ENST00000570587 MIA2Q96PC5 1412 aa17.61■□□□□ 0.41
KCNAB3-202ENST00000570587 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
KCNAB3-202ENST00000570587 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
KCNAB3-202ENST00000570587 GCC2Q8IWJ2 1684 aa17.59■□□□□ 0.41
KCNAB3-202ENST00000570587 HSP90AA2PQ14568 343 aaPredicted RBP17.58■□□□□ 0.41
KCNAB3-202ENST00000570587 NBPF8Q3BBV2 869 aa17.57■□□□□ 0.4
KCNAB3-202ENST00000570587 TMC1Q8TDI8 760 aa17.57■□□□□ 0.4
KCNAB3-202ENST00000570587 EHBP1L1Q8N3D4 1523 aa17.56■□□□□ 0.4
KCNAB3-202ENST00000570587 TEX14Q8IWB6 1497 aa17.56■□□□□ 0.4
KCNAB3-202ENST00000570587 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
KCNAB3-202ENST00000570587 L1TD1Q5T7N2 865 aaKnown RBP17.56■□□□□ 0.4
KCNAB3-202ENST00000570587 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
KCNAB3-202ENST00000570587 ARID4BQ4LE39 1312 aaPredicted RBP17.55■□□□□ 0.4
KCNAB3-202ENST00000570587 SUPT6HQ7KZ85 1726 aaKnown RBP17.54■□□□□ 0.4
KCNAB3-202ENST00000570587 UGGT2Q9NYU1 1516 aa17.54■□□□□ 0.4
KCNAB3-202ENST00000570587 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
KCNAB3-202ENST00000570587 HSP90AA1P07900 732 aaKnown RBP17.53■□□□□ 0.4
KCNAB3-202ENST00000570587 ARHGEF11O15085 1522 aa17.53■□□□□ 0.4
KCNAB3-202ENST00000570587 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
KCNAB3-202ENST00000570587 FAM161AQ3B820 660 aa17.52■□□□□ 0.4
KCNAB3-202ENST00000570587 BRD4O60885 1362 aaPredicted RBP17.52■□□□□ 0.4
KCNAB3-202ENST00000570587 MPHOSPH9Q99550 1183 aa17.52■□□□□ 0.4
KCNAB3-202ENST00000570587 CLCN1P35523 988 aa17.51■□□□□ 0.39
KCNAB3-202ENST00000570587 SENP3-EIF4A1A0A087X0R7 540 aa17.5■□□□□ 0.39
KCNAB3-202ENST00000570587 NAP1L5Q96NT1 182 aaPredicted RBP17.5■□□□□ 0.39
KCNAB3-202ENST00000570587 PNNQ9H307 717 aaKnown RBP17.5■□□□□ 0.39
KCNAB3-202ENST00000570587 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
KCNAB3-202ENST00000570587 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
KCNAB3-202ENST00000570587 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
KCNAB3-202ENST00000570587 C8orf34Q49A92 452 aa17.49■□□□□ 0.39
KCNAB3-202ENST00000570587 ROCK2O75116 1388 aaKnown RBP17.49■□□□□ 0.39
KCNAB3-202ENST00000570587 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
KCNAB3-202ENST00000570587 SKAP1Q86WV1 359 aa17.48■□□□□ 0.39
KCNAB3-202ENST00000570587 POGKQ9P215 609 aa17.48■□□□□ 0.39
KCNAB3-202ENST00000570587 ANKRD30BQ9BXX2 1392 aa17.48■□□□□ 0.39
KCNAB3-202ENST00000570587 FBLN2P98095 1184 aa17.48■□□□□ 0.39
KCNAB3-202ENST00000570587 DISP1Q96F81 1524 aa17.46■□□□□ 0.39
KCNAB3-202ENST00000570587 BCORL1Q5H9F3 1711 aa17.46■□□□□ 0.39
KCNAB3-202ENST00000570587 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms