RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 TSPY4P0CV99 314 aa20.62■□□□□ 0.89
USP43-202ENST00000570475 TSPY10P0CW01 314 aa20.62■□□□□ 0.89
USP43-202ENST00000570475 CDK13Q14004 1512 aaKnown RBP20.62■□□□□ 0.89
USP43-202ENST00000570475 DNMBPQ6XZF7 1577 aa20.62■□□□□ 0.89
USP43-202ENST00000570475 ZBED9Q6R2W3 1325 aa20.6■□□□□ 0.89
USP43-202ENST00000570475 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
USP43-202ENST00000570475 CC2D1BQ5T0F9 858 aaKnown RBP20.58■□□□□ 0.88
USP43-202ENST00000570475 AKNAQ7Z591 1439 aa20.58■□□□□ 0.88
USP43-202ENST00000570475 ST20-MTHFSA0A0A6YYL1 179 aa20.57■□□□□ 0.88
USP43-202ENST00000570475 CFAP43Q8NDM7 1665 aa20.57■□□□□ 0.88
USP43-202ENST00000570475 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
USP43-202ENST00000570475 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
USP43-202ENST00000570475 NOP58Q9Y2X3 529 aaKnown RBP20.56■□□□□ 0.88
USP43-202ENST00000570475 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
USP43-202ENST00000570475 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
USP43-202ENST00000570475 FANCIQ9NVI1 1328 aa20.54■□□□□ 0.88
USP43-202ENST00000570475 NUDCQ9Y266 331 aa20.54■□□□□ 0.88
USP43-202ENST00000570475 NUP155O75694 1391 aa20.54■□□□□ 0.88
USP43-202ENST00000570475 USP47Q96K76 1375 aa20.53■□□□□ 0.88
USP43-202ENST00000570475 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
USP43-202ENST00000570475 HNRNPMP52272 730 aaKnown RBP eCLIP20.52■□□□□ 0.88
USP43-202ENST00000570475 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
USP43-202ENST00000570475 SUPT6HQ7KZ85 1726 aaKnown RBP20.49■□□□□ 0.87
USP43-202ENST00000570475 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
USP43-202ENST00000570475 EHBP1L1Q8N3D4 1523 aa20.49■□□□□ 0.87
USP43-202ENST00000570475 ERICH6BQ5W0A0 696 aa20.48■□□□□ 0.87
USP43-202ENST00000570475 EPRSP07814 1512 aaKnown RBP20.48■□□□□ 0.87
USP43-202ENST00000570475 GRIN2BQ13224 1484 aa20.48■□□□□ 0.87
USP43-202ENST00000570475 ANKRD30BQ9BXX2 1392 aa20.47■□□□□ 0.87
USP43-202ENST00000570475 PLIN1O60240 522 aa20.46■□□□□ 0.87
USP43-202ENST00000570475 EXOC6Q8TAG9 804 aa20.45■□□□□ 0.86
USP43-202ENST00000570475 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
USP43-202ENST00000570475 DAXXQ9UER7 740 aaPredicted RBP20.44■□□□□ 0.86
USP43-202ENST00000570475 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
USP43-202ENST00000570475 PRDM2Q13029 1718 aa20.43■□□□□ 0.86
USP43-202ENST00000570475 NCOA1Q15788 1441 aa20.42■□□□□ 0.86
USP43-202ENST00000570475 CUL7Q14999 1698 aa20.42■□□□□ 0.86
USP43-202ENST00000570475 DAPK1P53355 1430 aa20.41■□□□□ 0.86
USP43-202ENST00000570475 KDM6BO15054 1643 aa20.41■□□□□ 0.86
USP43-202ENST00000570475 RCAN3Q9UKA8 241 aa20.39■□□□□ 0.85
USP43-202ENST00000570475 ABCC5O15440 1437 aa20.39■□□□□ 0.85
USP43-202ENST00000570475 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
USP43-202ENST00000570475 SKAP1Q86WV1 359 aa20.39■□□□□ 0.85
USP43-202ENST00000570475 UGGT2Q9NYU1 1516 aa20.38■□□□□ 0.85
USP43-202ENST00000570475 ANKRD30AQ9BXX3 1397 aa20.38■□□□□ 0.85
USP43-202ENST00000570475 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
USP43-202ENST00000570475 ROCK2O75116 1388 aaKnown RBP20.38■□□□□ 0.85
USP43-202ENST00000570475 JPH4Q96JJ6 628 aa20.37■□□□□ 0.85
USP43-202ENST00000570475 CTTNBP2Q8WZ74 1663 aa20.37■□□□□ 0.85
USP43-202ENST00000570475 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
USP43-202ENST00000570475 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
USP43-202ENST00000570475 RTN4Q9NQC3 1192 aaKnown RBP20.36■□□□□ 0.85
USP43-202ENST00000570475 MIA2Q96PC5 1412 aa20.35■□□□□ 0.85
USP43-202ENST00000570475 NBPF1Q3BBV0 1214 aa20.34■□□□□ 0.85
USP43-202ENST00000570475 IPO9Q96P70 1041 aaKnown RBP20.33■□□□□ 0.84
USP43-202ENST00000570475 RPRD2Q5VT52 1461 aaKnown RBP20.32■□□□□ 0.84
USP43-202ENST00000570475 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
USP43-202ENST00000570475 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
USP43-202ENST00000570475 RRP1P56182 461 aaKnown RBP20.29■□□□□ 0.84
USP43-202ENST00000570475 ANKRD50Q9ULJ7 1429 aa20.29■□□□□ 0.84
USP43-202ENST00000570475 MYBBP1AQ9BQG0 1328 aaKnown RBP20.28■□□□□ 0.84
USP43-202ENST00000570475 WDR43Q15061 677 aaKnown RBP eCLIP20.28■□□□□ 0.84
USP43-202ENST00000570475 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
USP43-202ENST00000570475 IQGAP2Q13576 1575 aa20.27■□□□□ 0.84
USP43-202ENST00000570475 NEFMP07197 916 aa20.27■□□□□ 0.84
USP43-202ENST00000570475 PANK3Q9H999 370 aa20.27■□□□□ 0.84
USP43-202ENST00000570475 KIF15Q9NS87 1388 aa20.26■□□□□ 0.83
USP43-202ENST00000570475 RGS3P49796 1198 aa20.26■□□□□ 0.83
USP43-202ENST00000570475 RALBP1Q15311 655 aa20.26■□□□□ 0.83
USP43-202ENST00000570475 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
USP43-202ENST00000570475 KTN1Q86UP2 1357 aaKnown RBP20.25■□□□□ 0.83
USP43-202ENST00000570475 PLB1Q6P1J6 1458 aa20.25■□□□□ 0.83
USP43-202ENST00000570475 SLC4A3P48751 1232 aa20.25■□□□□ 0.83
USP43-202ENST00000570475 KDM5BQ9UGL1 1544 aa20.25■□□□□ 0.83
USP43-202ENST00000570475 KIAA1107Q9UPP5 1409 aa20.24■□□□□ 0.83
USP43-202ENST00000570475 LAMC3Q9Y6N6 1575 aa20.24■□□□□ 0.83
USP43-202ENST00000570475 ERCC6Q03468 1493 aa20.23■□□□□ 0.83
USP43-202ENST00000570475 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
USP43-202ENST00000570475 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
USP43-202ENST00000570475 PDE4AP27815 886 aa20.22■□□□□ 0.83
USP43-202ENST00000570475 KNSTRNQ9Y448 316 aa20.22■□□□□ 0.83
USP43-202ENST00000570475 CRBNQ96SW2 442 aa20.21■□□□□ 0.83
USP43-202ENST00000570475 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
USP43-202ENST00000570475 SAMD9Q5K651 1589 aa20.21■□□□□ 0.83
USP43-202ENST00000570475 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
USP43-202ENST00000570475 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
USP43-202ENST00000570475 TCOF1Q13428 1488 aaKnown RBP20.2■□□□□ 0.82
USP43-202ENST00000570475 TNNT2P45379 298 aaPredicted RBP20.2■□□□□ 0.82
USP43-202ENST00000570475 CCDC146Q8IYE0 955 aa20.2■□□□□ 0.82
USP43-202ENST00000570475 DHX29Q7Z478 1369 aaKnown RBP20.19■□□□□ 0.82
USP43-202ENST00000570475 TMF1P82094 1093 aa20.17■□□□□ 0.82
USP43-202ENST00000570475 TROQ12816 1431 aaPredicted RBP20.17■□□□□ 0.82
USP43-202ENST00000570475 CARMIL2Q6F5E8 1435 aa20.17■□□□□ 0.82
USP43-202ENST00000570475 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
USP43-202ENST00000570475 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
USP43-202ENST00000570475 TEX14Q8IWB6 1497 aa20.16■□□□□ 0.82
USP43-202ENST00000570475 NUP153P49790 1475 aaKnown RBP20.15■□□□□ 0.82
USP43-202ENST00000570475 SPATA31E1Q6ZUB1 1445 aa20.13■□□□□ 0.81
USP43-202ENST00000570475 TCERG1O14776 1098 aaKnown RBP20.13■□□□□ 0.81
USP43-202ENST00000570475 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms