RNA–Protein interactions for RNA: ENST00000569624.5

CDH11-217, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-217ENST00000569624 ARHGEF12Q9NZN5 1544 aa21.92■■□□□ 1.1
CDH11-217ENST00000569624 STRCQ7RTU9 1775 aa21.89■■□□□ 1.09
CDH11-217ENST00000569624 MLECQ14165 292 aa21.88■■□□□ 1.09
CDH11-217ENST00000569624 SPATA31D1Q6ZQQ2 1576 aa21.87■■□□□ 1.09
CDH11-217ENST00000569624 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
CDH11-217ENST00000569624 ATP10AO60312 1499 aa21.84■■□□□ 1.09
CDH11-217ENST00000569624 C9orf84Q5VXU9 1444 aa21.84■■□□□ 1.09
CDH11-217ENST00000569624 SCAPERQ9BY12 1400 aa21.83■■□□□ 1.09
CDH11-217ENST00000569624 SETD1BQ9UPS6 1966 aaKnown RBP21.82■■□□□ 1.08
CDH11-217ENST00000569624 PLCH2O75038 1416 aa21.8■■□□□ 1.08
CDH11-217ENST00000569624 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
CDH11-217ENST00000569624 UHRF1BP1Q6BDS2 1440 aa21.8■■□□□ 1.08
CDH11-217ENST00000569624 CEBPAP49715 358 aaPredicted RBP21.77■■□□□ 1.08
CDH11-217ENST00000569624 PTPRTO14522 1441 aa21.76■■□□□ 1.07
CDH11-217ENST00000569624 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
CDH11-217ENST00000569624 MYO5CQ9NQX4 1742 aa21.75■■□□□ 1.07
CDH11-217ENST00000569624 IQSEC2Q5JU85 1478 aa21.72■■□□□ 1.07
CDH11-217ENST00000569624 ZNF518AQ6AHZ1 1483 aa21.72■■□□□ 1.07
CDH11-217ENST00000569624 RANGAP1P46060 587 aaPredicted RBP21.72■■□□□ 1.07
CDH11-217ENST00000569624 KDM5CP41229 1560 aa21.72■■□□□ 1.07
CDH11-217ENST00000569624 LTBP4Q8N2S1 1624 aa21.71■■□□□ 1.07
CDH11-217ENST00000569624 REREQ9P2R6 1566 aa21.7■■□□□ 1.06
CDH11-217ENST00000569624 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
CDH11-217ENST00000569624 C3P01024 1663 aa21.69■■□□□ 1.06
CDH11-217ENST00000569624 DIP2CQ9Y2E4 1556 aa21.67■■□□□ 1.06
CDH11-217ENST00000569624 EEA1Q15075 1411 aa21.67■■□□□ 1.06
CDH11-217ENST00000569624 KIF14Q15058 1648 aa21.62■■□□□ 1.05
CDH11-217ENST00000569624 NCOA1Q15788 1441 aa21.62■■□□□ 1.05
CDH11-217ENST00000569624 ABCA6Q8N139 1617 aa21.62■■□□□ 1.05
CDH11-217ENST00000569624 TRAPPC8Q9Y2L5 1435 aa21.61■■□□□ 1.05
CDH11-217ENST00000569624 AGLP35573 1532 aa21.6■■□□□ 1.05
CDH11-217ENST00000569624 ARHGAP5Q13017 1502 aa21.6■■□□□ 1.05
CDH11-217ENST00000569624 AFAP1Q8N556 730 aa21.6■■□□□ 1.05
CDH11-217ENST00000569624 MLH3Q9UHC1 1453 aa21.59■■□□□ 1.05
CDH11-217ENST00000569624 CDK11AQ9UQ88 783 aaPredicted RBP21.56■■□□□ 1.04
CDH11-217ENST00000569624 FMN1Q68DA7 1419 aa21.55■■□□□ 1.04
CDH11-217ENST00000569624 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
CDH11-217ENST00000569624 TROQ12816 1431 aaPredicted RBP21.55■■□□□ 1.04
CDH11-217ENST00000569624 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
CDH11-217ENST00000569624 MYT1LQ9UL68 1186 aa21.53■■□□□ 1.04
CDH11-217ENST00000569624 CDC42BPBQ9Y5S2 1711 aa21.52■■□□□ 1.04
CDH11-217ENST00000569624 CAMSAP1Q5T5Y3 1602 aa21.51■■□□□ 1.03
CDH11-217ENST00000569624 CLIP1P30622 1438 aa21.51■■□□□ 1.03
CDH11-217ENST00000569624 MROH2AA6NES4 1674 aa21.5■■□□□ 1.03
CDH11-217ENST00000569624 ABCC1P33527 1531 aa21.5■■□□□ 1.03
CDH11-217ENST00000569624 NPATQ14207 1427 aa21.5■■□□□ 1.03
CDH11-217ENST00000569624 PREX2Q70Z35 1606 aa21.49■■□□□ 1.03
CDH11-217ENST00000569624 ITSN2Q9NZM3 1697 aa21.49■■□□□ 1.03
CDH11-217ENST00000569624 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
CDH11-217ENST00000569624 ATP1B4Q9UN42 357 aaPredicted RBP21.47■■□□□ 1.03
CDH11-217ENST00000569624 LRRIQ1Q96JM4 1722 aa21.45■■□□□ 1.02
CDH11-217ENST00000569624 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
CDH11-217ENST00000569624 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
CDH11-217ENST00000569624 UBAP1LF5GYI3 381 aa21.43■■□□□ 1.02
CDH11-217ENST00000569624 ZNF335Q9H4Z2 1342 aaPredicted RBP21.43■■□□□ 1.02
CDH11-217ENST00000569624 PLA2R1Q13018 1463 aa21.42■■□□□ 1.02
CDH11-217ENST00000569624 MYO3AQ8NEV4 1616 aa21.4■■□□□ 1.02
CDH11-217ENST00000569624 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.01
CDH11-217ENST00000569624 ZMYM3Q14202 1370 aa21.38■■□□□ 1.01
CDH11-217ENST00000569624 NCKAP5LQ9HCH0 1330 aa21.38■■□□□ 1.01
CDH11-217ENST00000569624 SUPT6HQ7KZ85 1726 aaKnown RBP21.38■■□□□ 1.01
CDH11-217ENST00000569624 SAMD9LQ8IVG5 1584 aa21.37■■□□□ 1.01
CDH11-217ENST00000569624 PKD2Q13563 968 aa21.37■■□□□ 1.01
CDH11-217ENST00000569624 CEP170BQ9Y4F5 1589 aaPredicted RBP21.36■■□□□ 1.01
CDH11-217ENST00000569624 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
CDH11-217ENST00000569624 MED1Q15648 1581 aaPredicted RBP21.35■■□□□ 1.01
CDH11-217ENST00000569624 CLTCQ00610 1675 aaKnown RBP21.34■■□□□ 1.01
CDH11-217ENST00000569624 CCDC18Q5T9S5 1454 aa21.32■■□□□ 1
CDH11-217ENST00000569624 PLXNC1O60486 1568 aa21.31■■□□□ 1
CDH11-217ENST00000569624 PTPRKQ15262 1439 aa21.3■■□□□ 1
CDH11-217ENST00000569624 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
CDH11-217ENST00000569624 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
CDH11-217ENST00000569624 ATP7AQ04656 1500 aa21.28■■□□□ 1
CDH11-217ENST00000569624 PPP6R1Q9UPN7 881 aa21.27■■□□□ 1
CDH11-217ENST00000569624 INO80Q9ULG1 1556 aaPredicted RBP21.27■□□□□ 0.99
CDH11-217ENST00000569624 SPAG9O60271 1321 aaKnown RBP21.27■□□□□ 0.99
CDH11-217ENST00000569624 HSPA1LP34931 641 aa21.25■□□□□ 0.99
CDH11-217ENST00000569624 CASKIN1Q8WXD9 1431 aa21.25■□□□□ 0.99
CDH11-217ENST00000569624 CPS1P31327 1500 aa21.24■□□□□ 0.99
CDH11-217ENST00000569624 A2ML1A8K2U0 1454 aa21.23■□□□□ 0.99
CDH11-217ENST00000569624 A2MP01023 1474 aa21.23■□□□□ 0.99
CDH11-217ENST00000569624 POLR1AO95602 1720 aaPredicted RBP21.23■□□□□ 0.99
CDH11-217ENST00000569624 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
CDH11-217ENST00000569624 KIAA1107Q9UPP5 1409 aa21.21■□□□□ 0.99
CDH11-217ENST00000569624 TOM1O60784 492 aa21.2■□□□□ 0.98
CDH11-217ENST00000569624 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
CDH11-217ENST00000569624 GPATCH8Q9UKJ3 1502 aaKnown RBP21.19■□□□□ 0.98
CDH11-217ENST00000569624 NEURL4Q96JN8 1562 aa21.19■□□□□ 0.98
CDH11-217ENST00000569624 EHMT2Q96KQ7 1210 aa21.19■□□□□ 0.98
CDH11-217ENST00000569624 ZNF777Q9ULD5 760 aaPredicted RBP21.19■□□□□ 0.98
CDH11-217ENST00000569624 PLEKHH2Q8IVE3 1493 aa21.19■□□□□ 0.98
CDH11-217ENST00000569624 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
CDH11-217ENST00000569624 ADGBQ8N7X0 1667 aa21.18■□□□□ 0.98
CDH11-217ENST00000569624 HNRNPMP52272 730 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDH11-217ENST00000569624 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
CDH11-217ENST00000569624 FYCO1Q9BQS8 1478 aa21.15■□□□□ 0.98
CDH11-217ENST00000569624 GGT6Q6P531 493 aa21.15■□□□□ 0.98
CDH11-217ENST00000569624 ALKQ9UM73 1620 aa21.12■□□□□ 0.97
CDH11-217ENST00000569624 VWDEQ8N2E2 1590 aa21.11■□□□□ 0.97
CDH11-217ENST00000569624 PHF23Q9BUL5 403 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms