RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 TONSLQ96HA7 1378 aa11.29□□□□□ -0.6
LINC00559-201ENST00000569476 PREX2Q70Z35 1606 aa11.28□□□□□ -0.6
LINC00559-201ENST00000569476 ITGAEP38570 1179 aa11.28□□□□□ -0.6
LINC00559-201ENST00000569476 UHRF1BP1LA0JNW5 1464 aa11.28□□□□□ -0.6
LINC00559-201ENST00000569476 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
LINC00559-201ENST00000569476 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
LINC00559-201ENST00000569476 PLEKHH2Q8IVE3 1493 aa11.26□□□□□ -0.61
LINC00559-201ENST00000569476 POLR1AO95602 1720 aaPredicted RBP11.25□□□□□ -0.61
LINC00559-201ENST00000569476 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
LINC00559-201ENST00000569476 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
LINC00559-201ENST00000569476 ATP10BO94823 1461 aa11.25□□□□□ -0.61
LINC00559-201ENST00000569476 DENND4BO75064 1496 aaPredicted RBP11.24□□□□□ -0.61
LINC00559-201ENST00000569476 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
LINC00559-201ENST00000569476 RPRD2Q5VT52 1461 aaKnown RBP11.24□□□□□ -0.61
LINC00559-201ENST00000569476 ARAP3Q8WWN8 1544 aa11.24□□□□□ -0.61
LINC00559-201ENST00000569476 MIER1Q8N108 512 aa11.24□□□□□ -0.61
LINC00559-201ENST00000569476 ABCC2Q92887 1545 aa11.24□□□□□ -0.61
LINC00559-201ENST00000569476 ANKRD30AQ9BXX3 1397 aa11.23□□□□□ -0.61
LINC00559-201ENST00000569476 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
LINC00559-201ENST00000569476 KDM6BO15054 1643 aa11.23□□□□□ -0.61
LINC00559-201ENST00000569476 NCOA1Q15788 1441 aa11.22□□□□□ -0.61
LINC00559-201ENST00000569476 PRG4Q92954 1404 aaPredicted RBP11.22□□□□□ -0.61
LINC00559-201ENST00000569476 PLXNC1O60486 1568 aa11.22□□□□□ -0.61
LINC00559-201ENST00000569476 CCER2I3L3R5 266 aa11.21□□□□□ -0.61
LINC00559-201ENST00000569476 PTPRGP23470 1445 aa11.21□□□□□ -0.62
LINC00559-201ENST00000569476 ARHGEF12Q9NZN5 1544 aa11.21□□□□□ -0.62
LINC00559-201ENST00000569476 ANKRD30BQ9BXX2 1392 aa11.21□□□□□ -0.62
LINC00559-201ENST00000569476 NEUROD1Q13562 356 aa11.2□□□□□ -0.62
LINC00559-201ENST00000569476 KIAA1107Q9UPP5 1409 aa11.2□□□□□ -0.62
LINC00559-201ENST00000569476 PZPP20742 1482 aa11.19□□□□□ -0.62
LINC00559-201ENST00000569476 TEX14Q8IWB6 1497 aa11.19□□□□□ -0.62
LINC00559-201ENST00000569476 PLEKHD1A6NEE1 506 aa11.19□□□□□ -0.62
LINC00559-201ENST00000569476 UNC13BO14795 1591 aa11.19□□□□□ -0.62
LINC00559-201ENST00000569476 MYO5CQ9NQX4 1742 aa11.19□□□□□ -0.62
LINC00559-201ENST00000569476 MBD5Q9P267 1494 aa11.18□□□□□ -0.62
LINC00559-201ENST00000569476 CCDC141Q6ZP82 1450 aa11.18□□□□□ -0.62
LINC00559-201ENST00000569476 CDC42BPBQ9Y5S2 1711 aa11.17□□□□□ -0.62
LINC00559-201ENST00000569476 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
LINC00559-201ENST00000569476 CFDP1Q9UEE9 299 aaPredicted RBP11.17□□□□□ -0.62
LINC00559-201ENST00000569476 SIN3AQ96ST3 1273 aa11.17□□□□□ -0.62
LINC00559-201ENST00000569476 C9orf84Q5VXU9 1444 aa11.16□□□□□ -0.62
LINC00559-201ENST00000569476 SAMD9LQ8IVG5 1584 aa11.16□□□□□ -0.62
LINC00559-201ENST00000569476 UHRF1BP1Q6BDS2 1440 aa11.15□□□□□ -0.62
LINC00559-201ENST00000569476 ARID4BQ4LE39 1312 aaPredicted RBP11.14□□□□□ -0.63
LINC00559-201ENST00000569476 ANKRD50Q9ULJ7 1429 aa11.13□□□□□ -0.63
LINC00559-201ENST00000569476 LAMC1P11047 1609 aa11.13□□□□□ -0.63
LINC00559-201ENST00000569476 MAGI2Q86UL8 1455 aa11.13□□□□□ -0.63
LINC00559-201ENST00000569476 WDR7Q9Y4E6 1490 aa11.12□□□□□ -0.63
LINC00559-201ENST00000569476 RRP7BPQ9NSQ0 103 aa11.12□□□□□ -0.63
LINC00559-201ENST00000569476 IQGAP3Q86VI3 1631 aa11.12□□□□□ -0.63
LINC00559-201ENST00000569476 ZCCHC11Q5TAX3 1644 aaKnown RBP11.12□□□□□ -0.63
LINC00559-201ENST00000569476 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC00559-201ENST00000569476 DUOX2Q9NRD8 1548 aa11.11□□□□□ -0.63
LINC00559-201ENST00000569476 ERBINQ96RT1 1412 aa11.1□□□□□ -0.63
LINC00559-201ENST00000569476 ATP10AO60312 1499 aa11.1□□□□□ -0.63
LINC00559-201ENST00000569476 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
LINC00559-201ENST00000569476 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
LINC00559-201ENST00000569476 NEURL4Q96JN8 1562 aa11.09□□□□□ -0.63
LINC00559-201ENST00000569476 RALGAPBQ86X10 1494 aa11.09□□□□□ -0.63
LINC00559-201ENST00000569476 RTEL1-TNFRSF6BF6WH68 1400 aa11.08□□□□□ -0.64
LINC00559-201ENST00000569476 SPATA31E1Q6ZUB1 1445 aa11.08□□□□□ -0.64
LINC00559-201ENST00000569476 GTF3C3Q9Y5Q9 886 aa11.08□□□□□ -0.64
LINC00559-201ENST00000569476 ABCC1P33527 1531 aa11.07□□□□□ -0.64
LINC00559-201ENST00000569476 PLCH2O75038 1416 aa11.07□□□□□ -0.64
LINC00559-201ENST00000569476 CNTLNQ9NXG0 1405 aa11.07□□□□□ -0.64
LINC00559-201ENST00000569476 EIF4G2P78344 907 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC00559-201ENST00000569476 ANP32CO43423 234 aa11.07□□□□□ -0.64
LINC00559-201ENST00000569476 EIF2AK4Q9P2K8 1649 aaKnown RBP11.06□□□□□ -0.64
LINC00559-201ENST00000569476 FBLN2P98095 1184 aa11.06□□□□□ -0.64
LINC00559-201ENST00000569476 ARHGAP5Q13017 1502 aa11.06□□□□□ -0.64
LINC00559-201ENST00000569476 TSPY4P0CV99 314 aa11.06□□□□□ -0.64
LINC00559-201ENST00000569476 TSPY10P0CW01 314 aa11.06□□□□□ -0.64
LINC00559-201ENST00000569476 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
LINC00559-201ENST00000569476 KIF15Q9NS87 1388 aa11.05□□□□□ -0.64
LINC00559-201ENST00000569476 FAM135AQ9P2D6 1515 aa11.05□□□□□ -0.64
LINC00559-201ENST00000569476 CFAP74Q9C0B2 1584 aa11.05□□□□□ -0.64
LINC00559-201ENST00000569476 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
LINC00559-201ENST00000569476 ABCA9Q8IUA7 1624 aa11.04□□□□□ -0.64
LINC00559-201ENST00000569476 KDM5CP41229 1560 aa11.04□□□□□ -0.64
LINC00559-201ENST00000569476 ROCK2O75116 1388 aaKnown RBP11.04□□□□□ -0.64
LINC00559-201ENST00000569476 ZNF644Q9H582 1327 aaPredicted RBP11.04□□□□□ -0.64
LINC00559-201ENST00000569476 SYCP2Q9BX26 1530 aa11.04□□□□□ -0.64
LINC00559-201ENST00000569476 DEPDC5O75140 1603 aa11.03□□□□□ -0.64
LINC00559-201ENST00000569476 L3MBTL2Q969R5 705 aa11.02□□□□□ -0.65
LINC00559-201ENST00000569476 CCDC7Q96M83 1385 aa11.01□□□□□ -0.65
LINC00559-201ENST00000569476 KTN1Q86UP2 1357 aaKnown RBP11.01□□□□□ -0.65
LINC00559-201ENST00000569476 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
LINC00559-201ENST00000569476 HSPA5P11021 654 aaKnown RBP11□□□□□ -0.65
LINC00559-201ENST00000569476 INO80Q9ULG1 1556 aaPredicted RBP11□□□□□ -0.65
LINC00559-201ENST00000569476 ERCC6L2Q5T890 1561 aa10.99□□□□□ -0.65
LINC00559-201ENST00000569476 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
LINC00559-201ENST00000569476 NUP155O75694 1391 aa10.98□□□□□ -0.65
LINC00559-201ENST00000569476 BCORL1Q5H9F3 1711 aa10.98□□□□□ -0.65
LINC00559-201ENST00000569476 TRPM1Q7Z4N2 1603 aa10.98□□□□□ -0.65
LINC00559-201ENST00000569476 VWDEQ8N2E2 1590 aa10.98□□□□□ -0.65
LINC00559-201ENST00000569476 ZFYVE16Q7Z3T8 1539 aa10.97□□□□□ -0.65
LINC00559-201ENST00000569476 GPRASP1Q5JY77 1395 aa10.97□□□□□ -0.65
LINC00559-201ENST00000569476 E9PCH4 1651 aa10.97□□□□□ -0.65
LINC00559-201ENST00000569476 RNF17Q9BXT8 1623 aaKnown RBP10.97□□□□□ -0.65
LINC00559-201ENST00000569476 PRDM15P57071 1507 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms