RNA–Protein interactions for RNA: ENST00000569446.2

SCRT1-201, Transcript of scratch family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRT1, Length 3,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1-201ENST00000569446 BCL11AQ9H165 835 aa27.41■■□□□ 1.98
SCRT1-201ENST00000569446 FYCO1Q9BQS8 1478 aa27.41■■□□□ 1.98
SCRT1-201ENST00000569446 HFM1A2PYH4 1435 aa27.36■■□□□ 1.97
SCRT1-201ENST00000569446 CCDC7Q96M83 1385 aa27.33■■□□□ 1.97
SCRT1-201ENST00000569446 JPH4Q96JJ6 628 aa27.32■■□□□ 1.96
SCRT1-201ENST00000569446 CDK13Q14004 1512 aaKnown RBP27.32■■□□□ 1.96
SCRT1-201ENST00000569446 ZBTB47Q9UFB7 747 aaPredicted RBP27.3■■□□□ 1.96
SCRT1-201ENST00000569446 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
SCRT1-201ENST00000569446 LAS1LQ9Y4W2 734 aaKnown RBP27.26■■□□□ 1.95
SCRT1-201ENST00000569446 PLIN1O60240 522 aa27.25■■□□□ 1.95
SCRT1-201ENST00000569446 USP47Q96K76 1375 aa27.23■■□□□ 1.95
SCRT1-201ENST00000569446 ABCA10Q8WWZ4 1543 aa27.23■■□□□ 1.95
SCRT1-201ENST00000569446 TNNT2P45379 298 aaPredicted RBP27.23■■□□□ 1.95
SCRT1-201ENST00000569446 MSH5O43196 834 aa27.23■■□□□ 1.95
SCRT1-201ENST00000569446 NEUROD2Q15784 382 aa27.2■■□□□ 1.95
SCRT1-201ENST00000569446 CANXP27824 592 aaKnown RBP27.19■■□□□ 1.94
SCRT1-201ENST00000569446 PRG4Q92954 1404 aaPredicted RBP27.19■■□□□ 1.94
SCRT1-201ENST00000569446 URB2Q14146 1524 aaKnown RBP27.19■■□□□ 1.94
SCRT1-201ENST00000569446 WDR43Q15061 677 aaKnown RBP eCLIP27.18■■□□□ 1.94
SCRT1-201ENST00000569446 NUDCQ9Y266 331 aa27.17■■□□□ 1.94
SCRT1-201ENST00000569446 ROCK2O75116 1388 aaKnown RBP27.16■■□□□ 1.94
SCRT1-201ENST00000569446 CNTLNQ9NXG0 1405 aa27.16■■□□□ 1.94
SCRT1-201ENST00000569446 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
SCRT1-201ENST00000569446 AKNAQ7Z591 1439 aa27.16■■□□□ 1.94
SCRT1-201ENST00000569446 ZBED9Q6R2W3 1325 aa27.16■■□□□ 1.94
SCRT1-201ENST00000569446 NOP58Q9Y2X3 529 aaKnown RBP27.15■■□□□ 1.94
SCRT1-201ENST00000569446 ANKRD30AQ9BXX3 1397 aa27.13■■□□□ 1.93
SCRT1-201ENST00000569446 EXOC6Q8TAG9 804 aa27.12■■□□□ 1.93
SCRT1-201ENST00000569446 NBPF1Q3BBV0 1214 aa27.1■■□□□ 1.93
SCRT1-201ENST00000569446 PRDM2Q13029 1718 aa27.1■■□□□ 1.93
SCRT1-201ENST00000569446 EFCAB5A4FU69 1503 aa27.1■■□□□ 1.93
SCRT1-201ENST00000569446 MAP3K1Q13233 1512 aa27.09■■□□□ 1.93
SCRT1-201ENST00000569446 RGS3P49796 1198 aa27.09■■□□□ 1.93
SCRT1-201ENST00000569446 RCAN3Q9UKA8 241 aa27.08■■□□□ 1.93
SCRT1-201ENST00000569446 SKAP1Q86WV1 359 aa27.07■■□□□ 1.92
SCRT1-201ENST00000569446 CDCA7LQ96GN5 454 aa27.07■■□□□ 1.92
SCRT1-201ENST00000569446 KNSTRNQ9Y448 316 aa27.07■■□□□ 1.92
SCRT1-201ENST00000569446 EPRSP07814 1512 aaKnown RBP27.05■■□□□ 1.92
SCRT1-201ENST00000569446 RTN4Q9NQC3 1192 aaKnown RBP27.05■■□□□ 1.92
SCRT1-201ENST00000569446 DEKP35659 375 aaKnown RBP27.04■■□□□ 1.92
SCRT1-201ENST00000569446 PTPN23Q9H3S7 1636 aa27.03■■□□□ 1.92
SCRT1-201ENST00000569446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.02■■□□□ 1.92
SCRT1-201ENST00000569446 PANK3Q9H999 370 aa27.02■■□□□ 1.92
SCRT1-201ENST00000569446 CCDC146Q8IYE0 955 aa27.01■■□□□ 1.91
SCRT1-201ENST00000569446 PAK3O75914 559 aaPredicted RBP27.01■■□□□ 1.91
SCRT1-201ENST00000569446 ARXQ96QS3 562 aa27■■□□□ 1.91
SCRT1-201ENST00000569446 ANKRD30BQ9BXX2 1392 aa26.98■■□□□ 1.91
SCRT1-201ENST00000569446 ZNF608Q9ULD9 1512 aaPredicted RBP26.97■■□□□ 1.91
SCRT1-201ENST00000569446 DAPK1P53355 1430 aa26.96■■□□□ 1.91
SCRT1-201ENST00000569446 SNAPC4Q5SXM2 1469 aa26.96■■□□□ 1.91
SCRT1-201ENST00000569446 EHBP1L1Q8N3D4 1523 aa26.95■■□□□ 1.91
SCRT1-201ENST00000569446 ANKRD50Q9ULJ7 1429 aa26.95■■□□□ 1.9
SCRT1-201ENST00000569446 CARMIL2Q6F5E8 1435 aa26.94■■□□□ 1.9
SCRT1-201ENST00000569446 TMF1P82094 1093 aa26.94■■□□□ 1.9
SCRT1-201ENST00000569446 SLC4A3P48751 1232 aa26.93■■□□□ 1.9
SCRT1-201ENST00000569446 SAFB2Q14151 953 aaKnown RBP eCLIP26.93■■□□□ 1.9
SCRT1-201ENST00000569446 ABCC5O15440 1437 aa26.93■■□□□ 1.9
SCRT1-201ENST00000569446 KTN1Q86UP2 1357 aaKnown RBP26.92■■□□□ 1.9
SCRT1-201ENST00000569446 SUPT6HQ7KZ85 1726 aaKnown RBP26.92■■□□□ 1.9
SCRT1-201ENST00000569446 PLB1Q6P1J6 1458 aa26.92■■□□□ 1.9
SCRT1-201ENST00000569446 NUTM2DQ5VT03 806 aaPredicted RBP26.92■■□□□ 1.9
SCRT1-201ENST00000569446 PNISRQ8TF01 805 aaKnown RBP26.92■■□□□ 1.9
SCRT1-201ENST00000569446 NLRP13Q86W25 1043 aa26.91■■□□□ 1.9
SCRT1-201ENST00000569446 FRAT1Q92837 279 aaPredicted RBP26.9■■□□□ 1.9
SCRT1-201ENST00000569446 THOC2Q8NI27 1593 aaKnown RBP26.9■■□□□ 1.9
SCRT1-201ENST00000569446 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
SCRT1-201ENST00000569446 NEFMP07197 916 aa26.88■■□□□ 1.89
SCRT1-201ENST00000569446 KIF15Q9NS87 1388 aa26.88■■□□□ 1.89
SCRT1-201ENST00000569446 MYBBP1AQ9BQG0 1328 aaKnown RBP26.88■■□□□ 1.89
SCRT1-201ENST00000569446 ERICH6BQ5W0A0 696 aa26.87■■□□□ 1.89
SCRT1-201ENST00000569446 RALBP1Q15311 655 aa26.86■■□□□ 1.89
SCRT1-201ENST00000569446 FANCIQ9NVI1 1328 aa26.86■■□□□ 1.89
SCRT1-201ENST00000569446 RRP1P56182 461 aaKnown RBP26.85■■□□□ 1.89
SCRT1-201ENST00000569446 CRBNQ96SW2 442 aa26.82■■□□□ 1.88
SCRT1-201ENST00000569446 MIA2Q96PC5 1412 aa26.82■■□□□ 1.88
SCRT1-201ENST00000569446 MAGI3Q5TCQ9 1506 aa26.81■■□□□ 1.88
SCRT1-201ENST00000569446 NCOA1Q15788 1441 aa26.81■■□□□ 1.88
SCRT1-201ENST00000569446 CCDC144AA2RUR9 1427 aa26.8■■□□□ 1.88
SCRT1-201ENST00000569446 IPO9Q96P70 1041 aaKnown RBP26.79■■□□□ 1.88
SCRT1-201ENST00000569446 PTPRGP23470 1445 aa26.77■■□□□ 1.88
SCRT1-201ENST00000569446 KIF3BO15066 747 aa26.77■■□□□ 1.88
SCRT1-201ENST00000569446 CUL7Q14999 1698 aa26.77■■□□□ 1.88
SCRT1-201ENST00000569446 RRP7AQ9Y3A4 280 aaKnown RBP26.77■■□□□ 1.88
SCRT1-201ENST00000569446 GGT6Q6P531 493 aa26.76■■□□□ 1.87
SCRT1-201ENST00000569446 IQGAP2Q13576 1575 aa26.76■■□□□ 1.87
SCRT1-201ENST00000569446 CFAP43Q8NDM7 1665 aa26.76■■□□□ 1.87
SCRT1-201ENST00000569446 KIAA1107Q9UPP5 1409 aa26.75■■□□□ 1.87
SCRT1-201ENST00000569446 AFAP1Q8N556 730 aa26.75■■□□□ 1.87
SCRT1-201ENST00000569446 ADAMTS8Q9UP79 889 aa26.75■■□□□ 1.87
SCRT1-201ENST00000569446 PDE4AP27815 886 aa26.74■■□□□ 1.87
SCRT1-201ENST00000569446 PLPPR3Q6T4P5 718 aa26.74■■□□□ 1.87
SCRT1-201ENST00000569446 UGGT2Q9NYU1 1516 aa26.73■■□□□ 1.87
SCRT1-201ENST00000569446 KDM6BO15054 1643 aa26.73■■□□□ 1.87
SCRT1-201ENST00000569446 LAMC3Q9Y6N6 1575 aa26.72■■□□□ 1.87
SCRT1-201ENST00000569446 TROQ12816 1431 aaPredicted RBP26.72■■□□□ 1.87
SCRT1-201ENST00000569446 RPRD2Q5VT52 1461 aaKnown RBP26.72■■□□□ 1.87
SCRT1-201ENST00000569446 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.72■■□□□ 1.87
SCRT1-201ENST00000569446 HECW1Q76N89 1606 aa26.71■■□□□ 1.87
SCRT1-201ENST00000569446 PPM1GO15355 546 aaPredicted RBP26.71■■□□□ 1.87
SCRT1-201ENST00000569446 BCL2L13Q9BXK5 485 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms