RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 CCDC88BA6NC98 1476 aa14.07□□□□□ -0.16
CCDC113-205ENST00000569374 PHF8Q9UPP1 1060 aa14.07□□□□□ -0.16
CCDC113-205ENST00000569374 URB2Q14146 1524 aaKnown RBP14.06□□□□□ -0.16
CCDC113-205ENST00000569374 PPP1R37O75864 691 aa14.06□□□□□ -0.16
CCDC113-205ENST00000569374 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
CCDC113-205ENST00000569374 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
CCDC113-205ENST00000569374 ZRANB1Q9UGI0 708 aa14.03□□□□□ -0.16
CCDC113-205ENST00000569374 PDE4AP27815 886 aa14□□□□□ -0.17
CCDC113-205ENST00000569374 TMEM132AQ24JP5 1023 aa14□□□□□ -0.17
CCDC113-205ENST00000569374 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
CCDC113-205ENST00000569374 CD44P16070 742 aaKnown RBP13.99□□□□□ -0.17
CCDC113-205ENST00000569374 GTF3C3Q9Y5Q9 886 aa13.95□□□□□ -0.18
CCDC113-205ENST00000569374 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
CCDC113-205ENST00000569374 LARP6Q9BRS8 491 aaKnown RBP13.94□□□□□ -0.18
CCDC113-205ENST00000569374 TESPA1A2RU30 521 aaPredicted RBP13.91□□□□□ -0.18
CCDC113-205ENST00000569374 MKRN3Q13064 507 aaKnown RBP13.91□□□□□ -0.18
CCDC113-205ENST00000569374 TMEM106CQ9BVX2 250 aa13.91□□□□□ -0.18
CCDC113-205ENST00000569374 PHF12Q96QT6 1004 aa13.9□□□□□ -0.18
CCDC113-205ENST00000569374 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.19
CCDC113-205ENST00000569374 MFSD10Q14728 455 aa13.89□□□□□ -0.19
CCDC113-205ENST00000569374 DDX27Q96GQ7 796 aaKnown RBP13.89□□□□□ -0.19
CCDC113-205ENST00000569374 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
CCDC113-205ENST00000569374 SEMA3EO15041 775 aa13.88□□□□□ -0.19
CCDC113-205ENST00000569374 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
CCDC113-205ENST00000569374 MS4A4AQ96JQ5 239 aa13.87□□□□□ -0.19
CCDC113-205ENST00000569374 ZC3H15Q8WU90 426 aaKnown RBP13.86□□□□□ -0.19
CCDC113-205ENST00000569374 CRISPLD2Q9H0B8 497 aa13.86□□□□□ -0.19
CCDC113-205ENST00000569374 ARIH1Q9Y4X5 557 aaPredicted RBP13.86□□□□□ -0.19
CCDC113-205ENST00000569374 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
CCDC113-205ENST00000569374 DNMBPQ6XZF7 1577 aa13.85□□□□□ -0.19
CCDC113-205ENST00000569374 TARBP1Q13395 1621 aaKnown RBP13.82□□□□□ -0.2
CCDC113-205ENST00000569374 CHD1O14646 1710 aa13.78□□□□□ -0.2
CCDC113-205ENST00000569374 TIE1P35590 1138 aa13.78□□□□□ -0.2
CCDC113-205ENST00000569374 CAMK2BQ13554 666 aa13.78□□□□□ -0.2
CCDC113-205ENST00000569374 MS4A3Q96HJ5 214 aa13.78□□□□□ -0.2
CCDC113-205ENST00000569374 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
CCDC113-205ENST00000569374 CUX1P39880 1505 aa13.76□□□□□ -0.21
CCDC113-205ENST00000569374 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
CCDC113-205ENST00000569374 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
CCDC113-205ENST00000569374 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
CCDC113-205ENST00000569374 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
CCDC113-205ENST00000569374 BRPF1P55201 1214 aaPredicted RBP13.74□□□□□ -0.21
CCDC113-205ENST00000569374 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
CCDC113-205ENST00000569374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC113-205ENST00000569374 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
CCDC113-205ENST00000569374 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
CCDC113-205ENST00000569374 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
CCDC113-205ENST00000569374 FGD5Q6ZNL6 1462 aa13.71□□□□□ -0.21
CCDC113-205ENST00000569374 AQRO60306 1485 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC113-205ENST00000569374 ZMYND10O75800 440 aa13.7□□□□□ -0.22
CCDC113-205ENST00000569374 PPP1R15BQ5SWA1 713 aa13.7□□□□□ -0.22
CCDC113-205ENST00000569374 SLC24A3Q9HC58 644 aa13.7□□□□□ -0.22
CCDC113-205ENST00000569374 TTLL13PA6NNM8 815 aa13.69□□□□□ -0.22
CCDC113-205ENST00000569374 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
CCDC113-205ENST00000569374 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
CCDC113-205ENST00000569374 RIMBP3CA6NJZ7 1639 aa13.67□□□□□ -0.22
CCDC113-205ENST00000569374 RIMBP3BA6NNM3 1639 aa13.67□□□□□ -0.22
CCDC113-205ENST00000569374 RIMBP3Q9UFD9 1639 aa13.67□□□□□ -0.22
CCDC113-205ENST00000569374 ABCC8Q09428 1581 aa13.66□□□□□ -0.22
CCDC113-205ENST00000569374 PBRM1Q86U86 1689 aa13.66□□□□□ -0.22
CCDC113-205ENST00000569374 CLCN6P51797 869 aa13.65□□□□□ -0.22
CCDC113-205ENST00000569374 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
CCDC113-205ENST00000569374 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
CCDC113-205ENST00000569374 SPDYE16A6NNV3 312 aaPredicted RBP13.63□□□□□ -0.23
CCDC113-205ENST00000569374 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
CCDC113-205ENST00000569374 GPIHBP1Q8IV16 184 aa13.62□□□□□ -0.23
CCDC113-205ENST00000569374 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
CCDC113-205ENST00000569374 TDRD9Q8NDG6 1382 aaKnown RBP13.61□□□□□ -0.23
CCDC113-205ENST00000569374 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
CCDC113-205ENST00000569374 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
CCDC113-205ENST00000569374 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
CCDC113-205ENST00000569374 SNAPC4Q5SXM2 1469 aa13.6□□□□□ -0.23
CCDC113-205ENST00000569374 SOGA1O94964 1423 aa13.59□□□□□ -0.23
CCDC113-205ENST00000569374 ABCA5Q8WWZ7 1642 aa13.59□□□□□ -0.23
CCDC113-205ENST00000569374 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
CCDC113-205ENST00000569374 ARHGEF11O15085 1522 aa13.58□□□□□ -0.24
CCDC113-205ENST00000569374 KRI1Q8N9T8 703 aaKnown RBP13.57□□□□□ -0.24
CCDC113-205ENST00000569374 AK7Q96M32 723 aa13.57□□□□□ -0.24
CCDC113-205ENST00000569374 G3V3G9 751 aa13.56□□□□□ -0.24
CCDC113-205ENST00000569374 MICALL2Q8IY33 904 aa13.56□□□□□ -0.24
CCDC113-205ENST00000569374 MLLT3P42568 568 aaPredicted RBP13.55□□□□□ -0.24
CCDC113-205ENST00000569374 FOXK1P85037 733 aa13.55□□□□□ -0.24
CCDC113-205ENST00000569374 PDIA6Q15084 440 aa13.55□□□□□ -0.24
CCDC113-205ENST00000569374 RBM26Q5T8P6 1007 aaKnown RBP13.55□□□□□ -0.24
CCDC113-205ENST00000569374 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
CCDC113-205ENST00000569374 DPYSL4O14531 572 aa13.54□□□□□ -0.24
CCDC113-205ENST00000569374 DSG2Q14126 1118 aa13.54□□□□□ -0.24
CCDC113-205ENST00000569374 CLASP1Q7Z460 1538 aa13.52□□□□□ -0.25
CCDC113-205ENST00000569374 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
CCDC113-205ENST00000569374 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
CCDC113-205ENST00000569374 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
CCDC113-205ENST00000569374 IER5LQ5T953 404 aa13.49□□□□□ -0.25
CCDC113-205ENST00000569374 DPY19L2Q6NUT2 758 aa13.49□□□□□ -0.25
CCDC113-205ENST00000569374 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
CCDC113-205ENST00000569374 OCEL1Q9H607 264 aa13.48□□□□□ -0.25
CCDC113-205ENST00000569374 ADAMTS12P58397 1594 aa13.48□□□□□ -0.25
CCDC113-205ENST00000569374 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
CCDC113-205ENST00000569374 BOLA1Q9Y3E2 137 aa13.47□□□□□ -0.25
CCDC113-205ENST00000569374 GAPVD1Q14C86 1478 aa13.47□□□□□ -0.25
CCDC113-205ENST00000569374 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms