RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 FANCAO15360 1455 aa15.69■□□□□ 0.1
TCF4-243ENST00000569357 ARHGEF40Q8TER5 1519 aa15.68■□□□□ 0.1
TCF4-243ENST00000569357 AKNAQ7Z591 1439 aa15.68■□□□□ 0.1
TCF4-243ENST00000569357 CEBPAP49715 358 aaPredicted RBP15.65■□□□□ 0.1
TCF4-243ENST00000569357 YEATS2Q9ULM3 1422 aa15.64■□□□□ 0.09
TCF4-243ENST00000569357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
TCF4-243ENST00000569357 FHOD3Q2V2M9 1422 aa15.61■□□□□ 0.09
TCF4-243ENST00000569357 ZFYVE16Q7Z3T8 1539 aa15.61■□□□□ 0.09
TCF4-243ENST00000569357 PLEKHD1A6NEE1 506 aa15.6■□□□□ 0.09
TCF4-243ENST00000569357 RANGAP1P46060 587 aaPredicted RBP15.59■□□□□ 0.09
TCF4-243ENST00000569357 RICTORQ6R327 1708 aa15.59■□□□□ 0.09
TCF4-243ENST00000569357 EFCAB5A4FU69 1503 aa15.58■□□□□ 0.09
TCF4-243ENST00000569357 FER1L4A9Z1Z3 1794 aa15.58■□□□□ 0.08
TCF4-243ENST00000569357 TTC37Q6PGP7 1564 aa15.58■□□□□ 0.08
TCF4-243ENST00000569357 RAPGEF6Q8TEU7 1601 aa15.57■□□□□ 0.08
TCF4-243ENST00000569357 SIGLEC1Q9BZZ2 1709 aa15.57■□□□□ 0.08
TCF4-243ENST00000569357 PREX1Q8TCU6 1659 aa15.55■□□□□ 0.08
TCF4-243ENST00000569357 UHRF1BP1Q6BDS2 1440 aa15.55■□□□□ 0.08
TCF4-243ENST00000569357 ZMYM4Q5VZL5 1548 aa15.54■□□□□ 0.08
TCF4-243ENST00000569357 MAGI2Q86UL8 1455 aa15.53■□□□□ 0.08
TCF4-243ENST00000569357 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
TCF4-243ENST00000569357 HECW1Q76N89 1606 aa15.53■□□□□ 0.08
TCF4-243ENST00000569357 NUP153P49790 1475 aaKnown RBP15.52■□□□□ 0.08
TCF4-243ENST00000569357 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.08
TCF4-243ENST00000569357 STRCQ7RTU9 1775 aa15.52■□□□□ 0.08
TCF4-243ENST00000569357 MYT1LQ9UL68 1186 aa15.52■□□□□ 0.08
TCF4-243ENST00000569357 CFAP74Q9C0B2 1584 aa15.52■□□□□ 0.07
TCF4-243ENST00000569357 ARHGEF12Q9NZN5 1544 aa15.5■□□□□ 0.07
TCF4-243ENST00000569357 ATP10AO60312 1499 aa15.5■□□□□ 0.07
TCF4-243ENST00000569357 PTPRTO14522 1441 aa15.5■□□□□ 0.07
TCF4-243ENST00000569357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.49■□□□□ 0.07
TCF4-243ENST00000569357 C9orf84Q5VXU9 1444 aa15.49■□□□□ 0.07
TCF4-243ENST00000569357 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
TCF4-243ENST00000569357 ESF1Q9H501 851 aaKnown RBP15.47■□□□□ 0.07
TCF4-243ENST00000569357 POTEHQ6S545 545 aa15.46■□□□□ 0.07
TCF4-243ENST00000569357 LTBP4Q8N2S1 1624 aa15.46■□□□□ 0.06
TCF4-243ENST00000569357 SAMD9Q5K651 1589 aa15.45■□□□□ 0.06
TCF4-243ENST00000569357 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
TCF4-243ENST00000569357 IQSEC2Q5JU85 1478 aa15.42■□□□□ 0.06
TCF4-243ENST00000569357 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
TCF4-243ENST00000569357 PLCH2O75038 1416 aa15.42■□□□□ 0.06
TCF4-243ENST00000569357 AFAP1Q8N556 730 aa15.4■□□□□ 0.06
TCF4-243ENST00000569357 ATP1B4Q9UN42 357 aaPredicted RBP15.4■□□□□ 0.06
TCF4-243ENST00000569357 ZNF335Q9H4Z2 1342 aaPredicted RBP15.39■□□□□ 0.05
TCF4-243ENST00000569357 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
TCF4-243ENST00000569357 NCOA1Q15788 1441 aa15.37■□□□□ 0.05
TCF4-243ENST00000569357 TRAPPC8Q9Y2L5 1435 aa15.37■□□□□ 0.05
TCF4-243ENST00000569357 NCKAP5LQ9HCH0 1330 aa15.37■□□□□ 0.05
TCF4-243ENST00000569357 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
TCF4-243ENST00000569357 ZNF518AQ6AHZ1 1483 aa15.34■□□□□ 0.05
TCF4-243ENST00000569357 CDK13Q14004 1512 aaKnown RBP15.34■□□□□ 0.05
TCF4-243ENST00000569357 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
TCF4-243ENST00000569357 C3P01024 1663 aa15.34■□□□□ 0.05
TCF4-243ENST00000569357 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
TCF4-243ENST00000569357 HSPA1LP34931 641 aa15.33■□□□□ 0.04
TCF4-243ENST00000569357 CAMSAP1Q5T5Y3 1602 aa15.32■□□□□ 0.04
TCF4-243ENST00000569357 ARHGAP5Q13017 1502 aa15.29■□□□□ 0.04
TCF4-243ENST00000569357 MED1Q15648 1581 aaPredicted RBP15.28■□□□□ 0.04
TCF4-243ENST00000569357 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
TCF4-243ENST00000569357 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
TCF4-243ENST00000569357 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
TCF4-243ENST00000569357 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
TCF4-243ENST00000569357 MYO5CQ9NQX4 1742 aa15.26■□□□□ 0.03
TCF4-243ENST00000569357 DSG3P32926 999 aa15.26■□□□□ 0.03
TCF4-243ENST00000569357 PKD2Q13563 968 aa15.26■□□□□ 0.03
TCF4-243ENST00000569357 KDM5CP41229 1560 aa15.26■□□□□ 0.03
TCF4-243ENST00000569357 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
TCF4-243ENST00000569357 TOM1O60784 492 aa15.25■□□□□ 0.03
TCF4-243ENST00000569357 ABCA6Q8N139 1617 aa15.24■□□□□ 0.03
TCF4-243ENST00000569357 AGLP35573 1532 aa15.23■□□□□ 0.03
TCF4-243ENST00000569357 REREQ9P2R6 1566 aa15.23■□□□□ 0.03
TCF4-243ENST00000569357 ZMYM3Q14202 1370 aa15.23■□□□□ 0.03
TCF4-243ENST00000569357 MLH3Q9UHC1 1453 aa15.22■□□□□ 0.03
TCF4-243ENST00000569357 NPATQ14207 1427 aa15.22■□□□□ 0.03
TCF4-243ENST00000569357 KIF14Q15058 1648 aa15.21■□□□□ 0.03
TCF4-243ENST00000569357 CAPN15O75808 1086 aa15.21■□□□□ 0.03
TCF4-243ENST00000569357 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
TCF4-243ENST00000569357 CLIP1P30622 1438 aa15.18■□□□□ 0.02
TCF4-243ENST00000569357 TROQ12816 1431 aaPredicted RBP15.17■□□□□ 0.02
TCF4-243ENST00000569357 PLA2R1Q13018 1463 aa15.17■□□□□ 0.02
TCF4-243ENST00000569357 ZNF777Q9ULD5 760 aaPredicted RBP15.15■□□□□ 0.02
TCF4-243ENST00000569357 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
TCF4-243ENST00000569357 GGT6Q6P531 493 aa15.14■□□□□ 0.01
TCF4-243ENST00000569357 FMN1Q68DA7 1419 aa15.14■□□□□ 0.01
TCF4-243ENST00000569357 CEP170BQ9Y4F5 1589 aaPredicted RBP15.13■□□□□ 0.01
TCF4-243ENST00000569357 SUPT6HQ7KZ85 1726 aaKnown RBP15.12■□□□□ 0.01
TCF4-243ENST00000569357 MYO3AQ8NEV4 1616 aa15.12■□□□□ 0.01
TCF4-243ENST00000569357 ABCC1P33527 1531 aa15.12■□□□□ 0.01
TCF4-243ENST00000569357 UBTFP17480 764 aaKnown RBP15.11■□□□□ 0.01
TCF4-243ENST00000569357 MROH2AA6NES4 1674 aa15.11■□□□□ 0.01
TCF4-243ENST00000569357 SPAG9O60271 1321 aaKnown RBP15.11■□□□□ 0.01
TCF4-243ENST00000569357 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
TCF4-243ENST00000569357 PTPRKQ15262 1439 aa15.1■□□□□ 0.01
TCF4-243ENST00000569357 CDC42BPBQ9Y5S2 1711 aa15.09■□□□□ 0.01
TCF4-243ENST00000569357 CPS1P31327 1500 aa15.09■□□□□ 0.01
TCF4-243ENST00000569357 CLTCQ00610 1675 aaKnown RBP15.09■□□□□ 0.01
TCF4-243ENST00000569357 EEA1Q15075 1411 aa15.09■□□□□ 0.01
TCF4-243ENST00000569357 SHANK2Q9UPX8 1470 aa15.08■□□□□ 0.01
TCF4-243ENST00000569357 ZNF142P52746 1687 aaPredicted RBP15.08■□□□□ 0
TCF4-243ENST00000569357 ITSN2Q9NZM3 1697 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms