RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ABCC5O15440 1437 aa13.72□□□□□ -0.21
TCF4-240ENST00000568673 MPHOSPH9Q99550 1183 aa13.72□□□□□ -0.21
TCF4-240ENST00000568673 DNMT1P26358 1616 aaKnown RBP13.71□□□□□ -0.21
TCF4-240ENST00000568673 PRG4Q92954 1404 aaPredicted RBP13.71□□□□□ -0.21
TCF4-240ENST00000568673 ZNF644Q9H582 1327 aaPredicted RBP13.71□□□□□ -0.21
TCF4-240ENST00000568673 PELP1Q8IZL8 1130 aaKnown RBP13.71□□□□□ -0.22
TCF4-240ENST00000568673 SENP3Q9H4L4 574 aaPredicted RBP13.71□□□□□ -0.22
TCF4-240ENST00000568673 HIRIP3Q9BW71 556 aaPredicted RBP13.7□□□□□ -0.22
TCF4-240ENST00000568673 KDM5BQ9UGL1 1544 aa13.69□□□□□ -0.22
TCF4-240ENST00000568673 CFDP1Q9UEE9 299 aaPredicted RBP13.68□□□□□ -0.22
TCF4-240ENST00000568673 GPATCH8Q9UKJ3 1502 aaKnown RBP13.67□□□□□ -0.22
TCF4-240ENST00000568673 ADCY10Q96PN6 1610 aa13.66□□□□□ -0.22
TCF4-240ENST00000568673 ITSN2Q9NZM3 1697 aa13.66□□□□□ -0.22
TCF4-240ENST00000568673 CAMSAP2Q08AD1 1489 aa13.65□□□□□ -0.22
TCF4-240ENST00000568673 KCNH8Q96L42 1107 aa13.65□□□□□ -0.22
TCF4-240ENST00000568673 ABCA8O94911 1581 aa13.64□□□□□ -0.23
TCF4-240ENST00000568673 PLEKHD1A6NEE1 506 aa13.64□□□□□ -0.23
TCF4-240ENST00000568673 KIF14Q15058 1648 aa13.63□□□□□ -0.23
TCF4-240ENST00000568673 ANKRD30BQ9BXX2 1392 aa13.62□□□□□ -0.23
TCF4-240ENST00000568673 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
TCF4-240ENST00000568673 FOXD1Q16676 465 aa13.61□□□□□ -0.23
TCF4-240ENST00000568673 ATP10BO94823 1461 aa13.61□□□□□ -0.23
TCF4-240ENST00000568673 CCER2I3L3R5 266 aa13.61□□□□□ -0.23
TCF4-240ENST00000568673 ANP32CO43423 234 aa13.61□□□□□ -0.23
TCF4-240ENST00000568673 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
TCF4-240ENST00000568673 SLC4A1APQ9BWU0 796 aaKnown RBP13.6□□□□□ -0.23
TCF4-240ENST00000568673 ZNF777Q9ULD5 760 aaPredicted RBP13.6□□□□□ -0.23
TCF4-240ENST00000568673 ADGRL2O95490 1459 aa13.6□□□□□ -0.23
TCF4-240ENST00000568673 RPRD2Q5VT52 1461 aaKnown RBP13.59□□□□□ -0.23
TCF4-240ENST00000568673 ADGBQ8N7X0 1667 aa13.58□□□□□ -0.24
TCF4-240ENST00000568673 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
TCF4-240ENST00000568673 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
TCF4-240ENST00000568673 PTPRGP23470 1445 aa13.57□□□□□ -0.24
TCF4-240ENST00000568673 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
TCF4-240ENST00000568673 EIF4G2P78344 907 aaKnown RBP eCLIP13.57□□□□□ -0.242e-7■■■■■ 31.9
TCF4-240ENST00000568673 ANKRD30AQ9BXX3 1397 aa13.57□□□□□ -0.24
TCF4-240ENST00000568673 CROCC2H7BZ55 1655 aa13.56□□□□□ -0.24
TCF4-240ENST00000568673 PZPP20742 1482 aa13.55□□□□□ -0.24
TCF4-240ENST00000568673 CDC42BPAQ5VT25 1732 aa13.55□□□□□ -0.24
TCF4-240ENST00000568673 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
TCF4-240ENST00000568673 TEX14Q8IWB6 1497 aa13.53□□□□□ -0.24
TCF4-240ENST00000568673 SHANK2Q9UPX8 1470 aa13.53□□□□□ -0.24
TCF4-240ENST00000568673 ANKRD50Q9ULJ7 1429 aa13.53□□□□□ -0.24
TCF4-240ENST00000568673 TSPY4P0CV99 314 aa13.51□□□□□ -0.25
TCF4-240ENST00000568673 TSPY10P0CW01 314 aa13.51□□□□□ -0.25
TCF4-240ENST00000568673 NBPF8Q3BBV2 869 aa13.51□□□□□ -0.25
TCF4-240ENST00000568673 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
TCF4-240ENST00000568673 C9orf84Q5VXU9 1444 aa13.5□□□□□ -0.25
TCF4-240ENST00000568673 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
TCF4-240ENST00000568673 CHD1O14646 1710 aa13.5□□□□□ -0.25
TCF4-240ENST00000568673 PKD2Q13563 968 aa13.49□□□□□ -0.25
TCF4-240ENST00000568673 SHROOM2Q13796 1616 aa13.47□□□□□ -0.25
TCF4-240ENST00000568673 ARHGEF5Q12774 1597 aa13.47□□□□□ -0.25
TCF4-240ENST00000568673 HNRNPMP52272 730 aaKnown RBP eCLIP13.47□□□□□ -0.257e-6■■■□□ 17
TCF4-240ENST00000568673 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
TCF4-240ENST00000568673 MBD5Q9P267 1494 aa13.47□□□□□ -0.25
TCF4-240ENST00000568673 RSPH4AQ5TD94 716 aa13.46□□□□□ -0.25
TCF4-240ENST00000568673 SPATA31E1Q6ZUB1 1445 aa13.46□□□□□ -0.25
TCF4-240ENST00000568673 NUP155O75694 1391 aa13.46□□□□□ -0.26
TCF4-240ENST00000568673 C11orf95C9JLR9 678 aaPredicted RBP13.45□□□□□ -0.26
TCF4-240ENST00000568673 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
TCF4-240ENST00000568673 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
TCF4-240ENST00000568673 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
TCF4-240ENST00000568673 CNTLNQ9NXG0 1405 aa13.43□□□□□ -0.26
TCF4-240ENST00000568673 PREX2Q70Z35 1606 aa13.43□□□□□ -0.26
TCF4-240ENST00000568673 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
TCF4-240ENST00000568673 CCDC141Q6ZP82 1450 aa13.43□□□□□ -0.26
TCF4-240ENST00000568673 SAMD9LQ8IVG5 1584 aa13.42□□□□□ -0.26
TCF4-240ENST00000568673 ABCC2Q92887 1545 aa13.4□□□□□ -0.26
TCF4-240ENST00000568673 ERCC6L2Q5T890 1561 aa13.39□□□□□ -0.27
TCF4-240ENST00000568673 KIF7Q2M1P5 1343 aa13.38□□□□□ -0.27
TCF4-240ENST00000568673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.38□□□□□ -0.27
TCF4-240ENST00000568673 UHRF1BP1Q6BDS2 1440 aa13.38□□□□□ -0.27
TCF4-240ENST00000568673 POLR1AO95602 1720 aaPredicted RBP13.38□□□□□ -0.27
TCF4-240ENST00000568673 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
TCF4-240ENST00000568673 TTC37Q6PGP7 1564 aa13.37□□□□□ -0.27
TCF4-240ENST00000568673 ARHGAP5Q13017 1502 aa13.37□□□□□ -0.27
TCF4-240ENST00000568673 MAST1Q9Y2H9 1570 aa13.35□□□□□ -0.27
TCF4-240ENST00000568673 SYCP2Q9BX26 1530 aa13.35□□□□□ -0.27
TCF4-240ENST00000568673 ARHGEF12Q9NZN5 1544 aa13.35□□□□□ -0.27
TCF4-240ENST00000568673 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
TCF4-240ENST00000568673 USP47Q96K76 1375 aa13.35□□□□□ -0.27
TCF4-240ENST00000568673 PLEKHH2Q8IVE3 1493 aa13.35□□□□□ -0.27
TCF4-240ENST00000568673 FKBP8Q14318 412 aa13.34□□□□□ -0.27
TCF4-240ENST00000568673 CLASP1Q7Z460 1538 aa13.33□□□□□ -0.27
TCF4-240ENST00000568673 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.27
TCF4-240ENST00000568673 ARID4BQ4LE39 1312 aaPredicted RBP13.33□□□□□ -0.28
TCF4-240ENST00000568673 MYO5CQ9NQX4 1742 aa13.33□□□□□ -0.28
TCF4-240ENST00000568673 HNRNPUQ00839 825 aaKnown RBP eCLIP13.33□□□□□ -0.28
TCF4-240ENST00000568673 UHRF1BP1LA0JNW5 1464 aa13.33□□□□□ -0.28
TCF4-240ENST00000568673 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
TCF4-240ENST00000568673 KDM5CP41229 1560 aa13.32□□□□□ -0.28
TCF4-240ENST00000568673 PLCH2O75038 1416 aa13.31□□□□□ -0.28
TCF4-240ENST00000568673 NEFLP07196 543 aa13.31□□□□□ -0.28
TCF4-240ENST00000568673 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
TCF4-240ENST00000568673 DCAF11Q8TEB1 546 aa13.3□□□□□ -0.28
TCF4-240ENST00000568673 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
TCF4-240ENST00000568673 PLXNC1O60486 1568 aa13.29□□□□□ -0.28
TCF4-240ENST00000568673 ZCCHC11Q5TAX3 1644 aaKnown RBP13.29□□□□□ -0.28
TCF4-240ENST00000568673 BCORL1Q5H9F3 1711 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms