RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 RAPGEF6Q8TEU7 1601 aa16.61■□□□□ 0.25
KARS-209ENST00000568378 PTPRTO14522 1441 aa16.6■□□□□ 0.25
KARS-209ENST00000568378 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
KARS-209ENST00000568378 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
KARS-209ENST00000568378 HECW1Q76N89 1606 aa16.58■□□□□ 0.24
KARS-209ENST00000568378 LTBP4Q8N2S1 1624 aa16.56■□□□□ 0.24
KARS-209ENST00000568378 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
KARS-209ENST00000568378 C9orf84Q5VXU9 1444 aa16.54■□□□□ 0.24
KARS-209ENST00000568378 ATP10AO60312 1499 aa16.54■□□□□ 0.24
KARS-209ENST00000568378 NUP153P49790 1475 aaKnown RBP16.53■□□□□ 0.24
KARS-209ENST00000568378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.52■□□□□ 0.24
KARS-209ENST00000568378 PRXQ9BXM0 1461 aa16.51■□□□□ 0.23
KARS-209ENST00000568378 UBAP1LF5GYI3 381 aa16.51■□□□□ 0.23
KARS-209ENST00000568378 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
KARS-209ENST00000568378 SETD1BQ9UPS6 1966 aaKnown RBP16.5■□□□□ 0.23
KARS-209ENST00000568378 SAMD9Q5K651 1589 aa16.49■□□□□ 0.23
KARS-209ENST00000568378 NCOA1Q15788 1441 aa16.45■□□□□ 0.22
KARS-209ENST00000568378 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
KARS-209ENST00000568378 MYT1LQ9UL68 1186 aa16.43■□□□□ 0.22
KARS-209ENST00000568378 C3P01024 1663 aa16.43■□□□□ 0.22
KARS-209ENST00000568378 MED1Q15648 1581 aaPredicted RBP16.43■□□□□ 0.22
KARS-209ENST00000568378 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
KARS-209ENST00000568378 PLCH2O75038 1416 aa16.41■□□□□ 0.22
KARS-209ENST00000568378 TRAPPC8Q9Y2L5 1435 aa16.41■□□□□ 0.22
KARS-209ENST00000568378 RANGAP1P46060 587 aaPredicted RBP16.4■□□□□ 0.22
KARS-209ENST00000568378 ZNF335Q9H4Z2 1342 aaPredicted RBP16.4■□□□□ 0.22
KARS-209ENST00000568378 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
KARS-209ENST00000568378 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
KARS-209ENST00000568378 PHF23Q9BUL5 403 aaPredicted RBP16.38■□□□□ 0.21
KARS-209ENST00000568378 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
KARS-209ENST00000568378 ZNF518AQ6AHZ1 1483 aa16.37■□□□□ 0.21
KARS-209ENST00000568378 HSPA1LP34931 641 aa16.35■□□□□ 0.21
KARS-209ENST00000568378 NCKAP5LQ9HCH0 1330 aa16.35■□□□□ 0.21
KARS-209ENST00000568378 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
KARS-209ENST00000568378 AFAP1Q8N556 730 aa16.33■□□□□ 0.2
KARS-209ENST00000568378 MYO5CQ9NQX4 1742 aa16.33■□□□□ 0.2
KARS-209ENST00000568378 KDM5CP41229 1560 aa16.32■□□□□ 0.2
KARS-209ENST00000568378 PIP4K2BP78356 416 aa16.32■□□□□ 0.2
KARS-209ENST00000568378 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
KARS-209ENST00000568378 REREQ9P2R6 1566 aa16.32■□□□□ 0.2
KARS-209ENST00000568378 CNTLNQ9NXG0 1405 aa16.31■□□□□ 0.2
KARS-209ENST00000568378 AGLP35573 1532 aa16.29■□□□□ 0.2
KARS-209ENST00000568378 ABCA6Q8N139 1617 aa16.29■□□□□ 0.2
KARS-209ENST00000568378 PKD2Q13563 968 aa16.28■□□□□ 0.2
KARS-209ENST00000568378 ARHGAP5Q13017 1502 aa16.28■□□□□ 0.2
KARS-209ENST00000568378 NPATQ14207 1427 aa16.28■□□□□ 0.2
KARS-209ENST00000568378 TOM1O60784 492 aa16.27■□□□□ 0.2
KARS-209ENST00000568378 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
KARS-209ENST00000568378 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
KARS-209ENST00000568378 MLH3Q9UHC1 1453 aa16.24■□□□□ 0.19
KARS-209ENST00000568378 ATP1B4Q9UN42 357 aaPredicted RBP16.24■□□□□ 0.19
KARS-209ENST00000568378 SUPT6HQ7KZ85 1726 aaKnown RBP16.23■□□□□ 0.19
KARS-209ENST00000568378 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
KARS-209ENST00000568378 CDK11AQ9UQ88 783 aaPredicted RBP16.22■□□□□ 0.19
KARS-209ENST00000568378 KIF14Q15058 1648 aa16.22■□□□□ 0.19
KARS-209ENST00000568378 MROH2AA6NES4 1674 aa16.21■□□□□ 0.19
KARS-209ENST00000568378 ZMYM3Q14202 1370 aa16.21■□□□□ 0.19
KARS-209ENST00000568378 TCOF1Q13428 1488 aaKnown RBP16.21■□□□□ 0.19
KARS-209ENST00000568378 MYO3AQ8NEV4 1616 aa16.2■□□□□ 0.18
KARS-209ENST00000568378 ZNF142P52746 1687 aaPredicted RBP16.2■□□□□ 0.18
KARS-209ENST00000568378 CEP170BQ9Y4F5 1589 aaPredicted RBP16.19■□□□□ 0.18
KARS-209ENST00000568378 CPS1P31327 1500 aa16.18■□□□□ 0.18
KARS-209ENST00000568378 CLIP1P30622 1438 aa16.16■□□□□ 0.18
KARS-209ENST00000568378 ABCC1P33527 1531 aa16.14■□□□□ 0.18
KARS-209ENST00000568378 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
KARS-209ENST00000568378 PTPRKQ15262 1439 aa16.14■□□□□ 0.17
KARS-209ENST00000568378 KIDINS220Q9ULH0 1771 aa16.14■□□□□ 0.17
KARS-209ENST00000568378 CLTCQ00610 1675 aaKnown RBP16.13■□□□□ 0.17
KARS-209ENST00000568378 ITSN2Q9NZM3 1697 aa16.13■□□□□ 0.17
KARS-209ENST00000568378 SHANK2Q9UPX8 1470 aa16.12■□□□□ 0.17
KARS-209ENST00000568378 CDC42BPBQ9Y5S2 1711 aa16.11■□□□□ 0.17
KARS-209ENST00000568378 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
KARS-209ENST00000568378 PREX2Q70Z35 1606 aa16.08■□□□□ 0.17
KARS-209ENST00000568378 A2ML1A8K2U0 1454 aa16.08■□□□□ 0.16
KARS-209ENST00000568378 POLR1AO95602 1720 aaPredicted RBP16.07■□□□□ 0.16
KARS-209ENST00000568378 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
KARS-209ENST00000568378 GGT6Q6P531 493 aa16.05■□□□□ 0.16
KARS-209ENST00000568378 RGS17Q9UGC6 210 aaPredicted RBP16.05■□□□□ 0.16
KARS-209ENST00000568378 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
KARS-209ENST00000568378 SAMD9LQ8IVG5 1584 aa16.04■□□□□ 0.16
KARS-209ENST00000568378 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
KARS-209ENST00000568378 NEURL4Q96JN8 1562 aa16.04■□□□□ 0.16
KARS-209ENST00000568378 EEA1Q15075 1411 aa16.02■□□□□ 0.16
KARS-209ENST00000568378 ZNF777Q9ULD5 760 aaPredicted RBP16.02■□□□□ 0.16
KARS-209ENST00000568378 VWDEQ8N2E2 1590 aa16.01■□□□□ 0.15
KARS-209ENST00000568378 A2MP01023 1474 aa16■□□□□ 0.15
KARS-209ENST00000568378 ANKLE2Q86XL3 938 aa16■□□□□ 0.15
KARS-209ENST00000568378 PLXNC1O60486 1568 aa15.99■□□□□ 0.15
KARS-209ENST00000568378 ATP7AQ04656 1500 aa15.99■□□□□ 0.15
KARS-209ENST00000568378 SYCP2Q9BX26 1530 aa15.99■□□□□ 0.15
KARS-209ENST00000568378 RNF17Q9BXT8 1623 aaKnown RBP15.97■□□□□ 0.15
KARS-209ENST00000568378 TNRQ92752 1358 aa15.97■□□□□ 0.15
KARS-209ENST00000568378 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
KARS-209ENST00000568378 NPHP4O75161 1426 aaPredicted RBP15.96■□□□□ 0.15
KARS-209ENST00000568378 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.15
KARS-209ENST00000568378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.96■□□□□ 0.15
KARS-209ENST00000568378 LRRIQ1Q96JM4 1722 aa15.96■□□□□ 0.15
KARS-209ENST00000568378 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
KARS-209ENST00000568378 THEMISQ8N1K5 641 aaPredicted RBP15.94■□□□□ 0.14
KARS-209ENST00000568378 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms