RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
CDH16-206ENST00000567269 TROQ12816 1431 aaPredicted RBP17.19■□□□□ 0.34
CDH16-206ENST00000567269 KCNH8Q96L42 1107 aa17.18■□□□□ 0.34
CDH16-206ENST00000567269 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
CDH16-206ENST00000567269 TSPY4P0CV99 314 aa17.14■□□□□ 0.34
CDH16-206ENST00000567269 TSPY10P0CW01 314 aa17.14■□□□□ 0.34
CDH16-206ENST00000567269 DAPK1P53355 1430 aa17.14■□□□□ 0.33
CDH16-206ENST00000567269 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.33
CDH16-206ENST00000567269 ABCC5O15440 1437 aa17.12■□□□□ 0.33
CDH16-206ENST00000567269 HNRNPMP52272 730 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDH16-206ENST00000567269 ZNF326Q5BKZ1 582 aaKnown RBP17.1■□□□□ 0.33
CDH16-206ENST00000567269 ATP10BO94823 1461 aa17.09■□□□□ 0.33
CDH16-206ENST00000567269 GPATCH8Q9UKJ3 1502 aaKnown RBP17.08■□□□□ 0.32
CDH16-206ENST00000567269 L3MBTL2Q969R5 705 aa17.07■□□□□ 0.32
CDH16-206ENST00000567269 CAMSAP2Q08AD1 1489 aa17.06■□□□□ 0.32
CDH16-206ENST00000567269 KIF14Q15058 1648 aa17.05■□□□□ 0.32
CDH16-206ENST00000567269 KDM6BO15054 1643 aa17.04■□□□□ 0.32
CDH16-206ENST00000567269 ANKRD30AQ9BXX3 1397 aa17.04■□□□□ 0.32
CDH16-206ENST00000567269 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
CDH16-206ENST00000567269 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
CDH16-206ENST00000567269 PKD2Q13563 968 aa17.02■□□□□ 0.32
CDH16-206ENST00000567269 ANP32CO43423 234 aa17.01■□□□□ 0.31
CDH16-206ENST00000567269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDH16-206ENST00000567269 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
CDH16-206ENST00000567269 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
CDH16-206ENST00000567269 BCL11AQ9H165 835 aa16.99■□□□□ 0.31
CDH16-206ENST00000567269 CHD1O14646 1710 aa16.99■□□□□ 0.31
CDH16-206ENST00000567269 NCOA1Q15788 1441 aa16.99■□□□□ 0.31
CDH16-206ENST00000567269 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
CDH16-206ENST00000567269 ABCA8O94911 1581 aa16.98■□□□□ 0.31
CDH16-206ENST00000567269 EIF4G2P78344 907 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDH16-206ENST00000567269 NUP155O75694 1391 aa16.98■□□□□ 0.31
CDH16-206ENST00000567269 HSPA5P11021 654 aaKnown RBP16.97■□□□□ 0.31
CDH16-206ENST00000567269 DNMT1P26358 1616 aaKnown RBP16.97■□□□□ 0.31
CDH16-206ENST00000567269 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
CDH16-206ENST00000567269 ANKRD50Q9ULJ7 1429 aa16.96■□□□□ 0.31
CDH16-206ENST00000567269 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
CDH16-206ENST00000567269 C9orf84Q5VXU9 1444 aa16.94■□□□□ 0.3
CDH16-206ENST00000567269 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
CDH16-206ENST00000567269 ITSN2Q9NZM3 1697 aa16.94■□□□□ 0.3
CDH16-206ENST00000567269 ERCC6L2Q5T890 1561 aa16.93■□□□□ 0.3
CDH16-206ENST00000567269 ANKRD30BQ9BXX2 1392 aa16.92■□□□□ 0.3
CDH16-206ENST00000567269 KIF15Q9NS87 1388 aa16.92■□□□□ 0.3
CDH16-206ENST00000567269 DENND4BO75064 1496 aaPredicted RBP16.92■□□□□ 0.3
CDH16-206ENST00000567269 NBPF8Q3BBV2 869 aa16.9■□□□□ 0.3
CDH16-206ENST00000567269 ABCC10Q5T3U5 1492 aa16.89■□□□□ 0.29
CDH16-206ENST00000567269 ARHGAP5Q13017 1502 aa16.88■□□□□ 0.29
CDH16-206ENST00000567269 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
CDH16-206ENST00000567269 EFCAB2Q5VUJ9 269 aa16.86■□□□□ 0.29
CDH16-206ENST00000567269 RSPH4AQ5TD94 716 aa16.86■□□□□ 0.29
CDH16-206ENST00000567269 ADCY10Q96PN6 1610 aa16.84■□□□□ 0.29
CDH16-206ENST00000567269 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.29
CDH16-206ENST00000567269 KIAA1107Q9UPP5 1409 aa16.83■□□□□ 0.29
CDH16-206ENST00000567269 RPRD2Q5VT52 1461 aaKnown RBP16.83■□□□□ 0.28
CDH16-206ENST00000567269 WASHC2AQ641Q2 1341 aa16.82■□□□□ 0.28
CDH16-206ENST00000567269 PZPP20742 1482 aa16.82■□□□□ 0.28
CDH16-206ENST00000567269 DCAF11Q8TEB1 546 aa16.82■□□□□ 0.28
CDH16-206ENST00000567269 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
CDH16-206ENST00000567269 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
CDH16-206ENST00000567269 ABCC2Q92887 1545 aa16.81■□□□□ 0.28
CDH16-206ENST00000567269 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
CDH16-206ENST00000567269 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
CDH16-206ENST00000567269 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
CDH16-206ENST00000567269 SYCP2Q9BX26 1530 aa16.78■□□□□ 0.28
CDH16-206ENST00000567269 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.28
CDH16-206ENST00000567269 MBD5Q9P267 1494 aa16.77■□□□□ 0.28
CDH16-206ENST00000567269 CARD11Q9BXL7 1154 aa16.77■□□□□ 0.27
CDH16-206ENST00000567269 KDM5BQ9UGL1 1544 aa16.76■□□□□ 0.27
CDH16-206ENST00000567269 ADGBQ8N7X0 1667 aa16.76■□□□□ 0.27
CDH16-206ENST00000567269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
CDH16-206ENST00000567269 TTC37Q6PGP7 1564 aa16.75■□□□□ 0.27
CDH16-206ENST00000567269 SPAG9O60271 1321 aaKnown RBP16.74■□□□□ 0.27
CDH16-206ENST00000567269 CCER2I3L3R5 266 aa16.74■□□□□ 0.27
CDH16-206ENST00000567269 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
CDH16-206ENST00000567269 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
CDH16-206ENST00000567269 SAMD9LQ8IVG5 1584 aa16.74■□□□□ 0.27
CDH16-206ENST00000567269 TEX14Q8IWB6 1497 aa16.72■□□□□ 0.27
CDH16-206ENST00000567269 HNRNPUQ00839 825 aaKnown RBP eCLIP16.71■□□□□ 0.27
CDH16-206ENST00000567269 CROCC2H7BZ55 1655 aa16.7■□□□□ 0.26
CDH16-206ENST00000567269 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
CDH16-206ENST00000567269 PLCH2O75038 1416 aa16.7■□□□□ 0.26
CDH16-206ENST00000567269 PREX2Q70Z35 1606 aa16.69■□□□□ 0.26
CDH16-206ENST00000567269 PLEKHH2Q8IVE3 1493 aa16.69■□□□□ 0.26
CDH16-206ENST00000567269 USP47Q96K76 1375 aa16.69■□□□□ 0.26
CDH16-206ENST00000567269 CCDC7Q96M83 1385 aa16.69■□□□□ 0.26
CDH16-206ENST00000567269 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
CDH16-206ENST00000567269 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
CDH16-206ENST00000567269 FAM9BQ8IZU0 186 aa16.69■□□□□ 0.26
CDH16-206ENST00000567269 CCDC144AA2RUR9 1427 aa16.69■□□□□ 0.26
CDH16-206ENST00000567269 BCANQ96GW7 911 aa16.67■□□□□ 0.26
CDH16-206ENST00000567269 ARHGEF5Q12774 1597 aa16.67■□□□□ 0.26
CDH16-206ENST00000567269 MRS2Q9HD23 443 aa16.66■□□□□ 0.26
CDH16-206ENST00000567269 TRAPPC8Q9Y2L5 1435 aa16.66■□□□□ 0.26
CDH16-206ENST00000567269 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
CDH16-206ENST00000567269 KIF3BO15066 747 aa16.66■□□□□ 0.26
CDH16-206ENST00000567269 ST20-MTHFSA0A0A6YYL1 179 aa16.65■□□□□ 0.26
CDH16-206ENST00000567269 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.25
CDH16-206ENST00000567269 ARHGEF12Q9NZN5 1544 aa16.63■□□□□ 0.25
CDH16-206ENST00000567269 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
CDH16-206ENST00000567269 NEFLP07196 543 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms