RNA–Protein interactions for RNA: ENST00000566624.5

RPL4-213, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-213ENST00000566624 SPATA31D1Q6ZQQ2 1576 aa18.48■□□□□ 0.55
RPL4-213ENST00000566624 CFAP74Q9C0B2 1584 aa18.47■□□□□ 0.55
RPL4-213ENST00000566624 HECW1Q76N89 1606 aa18.47■□□□□ 0.55
RPL4-213ENST00000566624 ARHGEF12Q9NZN5 1544 aa18.47■□□□□ 0.55
RPL4-213ENST00000566624 PREX1Q8TCU6 1659 aa18.47■□□□□ 0.55
RPL4-213ENST00000566624 MAGI2Q86UL8 1455 aa18.46■□□□□ 0.55
RPL4-213ENST00000566624 CEBPAP49715 358 aaPredicted RBP18.44■□□□□ 0.54
RPL4-213ENST00000566624 PLEKHD1A6NEE1 506 aa18.42■□□□□ 0.54
RPL4-213ENST00000566624 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
RPL4-213ENST00000566624 ATP10AO60312 1499 aa18.39■□□□□ 0.53
RPL4-213ENST00000566624 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
RPL4-213ENST00000566624 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
RPL4-213ENST00000566624 LTBP4Q8N2S1 1624 aa18.35■□□□□ 0.53
RPL4-213ENST00000566624 UHRF1BP1Q6BDS2 1440 aa18.35■□□□□ 0.53
RPL4-213ENST00000566624 PTPRTO14522 1441 aa18.34■□□□□ 0.53
RPL4-213ENST00000566624 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
RPL4-213ENST00000566624 PLCH2O75038 1416 aa18.33■□□□□ 0.53
RPL4-213ENST00000566624 CDK13Q14004 1512 aaKnown RBP18.32■□□□□ 0.52
RPL4-213ENST00000566624 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
RPL4-213ENST00000566624 C3P01024 1663 aa18.27■□□□□ 0.52
RPL4-213ENST00000566624 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
RPL4-213ENST00000566624 SETD1BQ9UPS6 1966 aaKnown RBP18.25■□□□□ 0.51
RPL4-213ENST00000566624 KDM5CP41229 1560 aa18.24■□□□□ 0.51
RPL4-213ENST00000566624 DIP2CQ9Y2E4 1556 aa18.23■□□□□ 0.51
RPL4-213ENST00000566624 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
RPL4-213ENST00000566624 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
RPL4-213ENST00000566624 ZNF518AQ6AHZ1 1483 aa18.22■□□□□ 0.51
RPL4-213ENST00000566624 EFCAB2Q5VUJ9 269 aa18.22■□□□□ 0.51
RPL4-213ENST00000566624 MYO5CQ9NQX4 1742 aa18.21■□□□□ 0.51
RPL4-213ENST00000566624 REREQ9P2R6 1566 aa18.21■□□□□ 0.51
RPL4-213ENST00000566624 KIF14Q15058 1648 aa18.2■□□□□ 0.5
RPL4-213ENST00000566624 ABCA6Q8N139 1617 aa18.19■□□□□ 0.5
RPL4-213ENST00000566624 TRAPPC8Q9Y2L5 1435 aa18.18■□□□□ 0.5
RPL4-213ENST00000566624 AGLP35573 1532 aa18.15■□□□□ 0.5
RPL4-213ENST00000566624 ZNF335Q9H4Z2 1342 aaPredicted RBP18.15■□□□□ 0.5
RPL4-213ENST00000566624 CAMSAP1Q5T5Y3 1602 aa18.14■□□□□ 0.49
RPL4-213ENST00000566624 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.49
RPL4-213ENST00000566624 ARHGAP5Q13017 1502 aa18.13■□□□□ 0.49
RPL4-213ENST00000566624 UBAP1LF5GYI3 381 aa18.13■□□□□ 0.49
RPL4-213ENST00000566624 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
RPL4-213ENST00000566624 NCKAP5LQ9HCH0 1330 aa18.12■□□□□ 0.49
RPL4-213ENST00000566624 TROQ12816 1431 aaPredicted RBP18.08■□□□□ 0.49
RPL4-213ENST00000566624 ESF1Q9H501 851 aaKnown RBP18.08■□□□□ 0.48
RPL4-213ENST00000566624 ATP1B4Q9UN42 357 aaPredicted RBP18.08■□□□□ 0.48
RPL4-213ENST00000566624 CDC42BPBQ9Y5S2 1711 aa18.08■□□□□ 0.48
RPL4-213ENST00000566624 CNTLNQ9NXG0 1405 aa18.07■□□□□ 0.48
RPL4-213ENST00000566624 NPATQ14207 1427 aa18.06■□□□□ 0.48
RPL4-213ENST00000566624 ABCC1P33527 1531 aa18.06■□□□□ 0.48
RPL4-213ENST00000566624 KIDINS220Q9ULH0 1771 aa18.06■□□□□ 0.48
RPL4-213ENST00000566624 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
RPL4-213ENST00000566624 EEA1Q15075 1411 aa18.05■□□□□ 0.48
RPL4-213ENST00000566624 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
RPL4-213ENST00000566624 CDK11AQ9UQ88 783 aaPredicted RBP18.03■□□□□ 0.48
RPL4-213ENST00000566624 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
RPL4-213ENST00000566624 ZMYM3Q14202 1370 aa18.03■□□□□ 0.48
RPL4-213ENST00000566624 ITSN2Q9NZM3 1697 aa18.03■□□□□ 0.48
RPL4-213ENST00000566624 FMN1Q68DA7 1419 aa18.02■□□□□ 0.48
RPL4-213ENST00000566624 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
RPL4-213ENST00000566624 HSPA1LP34931 641 aa18.01■□□□□ 0.47
RPL4-213ENST00000566624 PREX2Q70Z35 1606 aa18.01■□□□□ 0.47
RPL4-213ENST00000566624 PLA2R1Q13018 1463 aa18.01■□□□□ 0.47
RPL4-213ENST00000566624 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
RPL4-213ENST00000566624 ZNF142P52746 1687 aaPredicted RBP18■□□□□ 0.47
RPL4-213ENST00000566624 MYO3AQ8NEV4 1616 aa18■□□□□ 0.47
RPL4-213ENST00000566624 CLIP1P30622 1438 aa17.99■□□□□ 0.47
RPL4-213ENST00000566624 CEP170BQ9Y4F5 1589 aaPredicted RBP17.97■□□□□ 0.47
RPL4-213ENST00000566624 PKD2Q13563 968 aa17.97■□□□□ 0.47
RPL4-213ENST00000566624 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.47
RPL4-213ENST00000566624 PTPRKQ15262 1439 aa17.96■□□□□ 0.47
RPL4-213ENST00000566624 CLTCQ00610 1675 aaKnown RBP17.96■□□□□ 0.47
RPL4-213ENST00000566624 PIP4K2BP78356 416 aa17.94■□□□□ 0.46
RPL4-213ENST00000566624 SUPT6HQ7KZ85 1726 aaKnown RBP17.94■□□□□ 0.46
RPL4-213ENST00000566624 PPP6R1Q9UPN7 881 aa17.93■□□□□ 0.46
RPL4-213ENST00000566624 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
RPL4-213ENST00000566624 EHMT2Q96KQ7 1210 aa17.92■□□□□ 0.46
RPL4-213ENST00000566624 CDC42BPAQ5VT25 1732 aa17.92■□□□□ 0.46
RPL4-213ENST00000566624 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
RPL4-213ENST00000566624 ALKQ9UM73 1620 aa17.89■□□□□ 0.45
RPL4-213ENST00000566624 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
RPL4-213ENST00000566624 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
RPL4-213ENST00000566624 DNMT1P26358 1616 aaKnown RBP17.87■□□□□ 0.45
RPL4-213ENST00000566624 TOM1O60784 492 aa17.86■□□□□ 0.45
RPL4-213ENST00000566624 UBTFP17480 764 aaKnown RBP17.86■□□□□ 0.45
RPL4-213ENST00000566624 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
RPL4-213ENST00000566624 SHANK2Q9UPX8 1470 aa17.86■□□□□ 0.45
RPL4-213ENST00000566624 CPS1P31327 1500 aa17.86■□□□□ 0.45
RPL4-213ENST00000566624 A2ML1A8K2U0 1454 aa17.85■□□□□ 0.45
RPL4-213ENST00000566624 A2MP01023 1474 aa17.85■□□□□ 0.45
RPL4-213ENST00000566624 HNRNPMP52272 730 aaKnown RBP eCLIP17.85■□□□□ 0.456e-8■■□□□ 13
RPL4-213ENST00000566624 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
RPL4-213ENST00000566624 INO80Q9ULG1 1556 aaPredicted RBP17.85■□□□□ 0.45
RPL4-213ENST00000566624 GGT6Q6P531 493 aa17.84■□□□□ 0.45
RPL4-213ENST00000566624 ZNF777Q9ULD5 760 aaPredicted RBP17.84■□□□□ 0.45
RPL4-213ENST00000566624 POLR1AO95602 1720 aaPredicted RBP17.82■□□□□ 0.44
RPL4-213ENST00000566624 FOXD1Q16676 465 aa17.82■□□□□ 0.44
RPL4-213ENST00000566624 VWDEQ8N2E2 1590 aa17.82■□□□□ 0.44
RPL4-213ENST00000566624 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
RPL4-213ENST00000566624 CCDC18Q5T9S5 1454 aa17.81■□□□□ 0.44
RPL4-213ENST00000566624 CASKIN1Q8WXD9 1431 aa17.8■□□□□ 0.44
RPL4-213ENST00000566624 FBXO31Q5XUX0 539 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms