RNA–Protein interactions for RNA: ENST00000565344.1

EARS2-216, Transcript of glutamyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene EARS2, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EARS2-216ENST00000565344 ARHGEF12Q9NZN5 1544 aa17.6■□□□□ 0.41
EARS2-216ENST00000565344 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
EARS2-216ENST00000565344 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.41
EARS2-216ENST00000565344 HECW1Q76N89 1606 aa17.58■□□□□ 0.41
EARS2-216ENST00000565344 EFCAB5A4FU69 1503 aa17.58■□□□□ 0.41
EARS2-216ENST00000565344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.58■□□□□ 0.41
EARS2-216ENST00000565344 CEBPAP49715 358 aaPredicted RBP17.58■□□□□ 0.4
EARS2-216ENST00000565344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
EARS2-216ENST00000565344 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
EARS2-216ENST00000565344 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
EARS2-216ENST00000565344 CFAP74Q9C0B2 1584 aa17.54■□□□□ 0.4
EARS2-216ENST00000565344 RANGAP1P46060 587 aaPredicted RBP17.54■□□□□ 0.4
EARS2-216ENST00000565344 LTBP4Q8N2S1 1624 aa17.54■□□□□ 0.4
EARS2-216ENST00000565344 PLEKHD1A6NEE1 506 aa17.52■□□□□ 0.4
EARS2-216ENST00000565344 ATP10AO60312 1499 aa17.51■□□□□ 0.39
EARS2-216ENST00000565344 PTPRTO14522 1441 aa17.51■□□□□ 0.39
EARS2-216ENST00000565344 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
EARS2-216ENST00000565344 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
EARS2-216ENST00000565344 SCAPERQ9BY12 1400 aa17.49■□□□□ 0.39
EARS2-216ENST00000565344 PLCH2O75038 1416 aa17.47■□□□□ 0.39
EARS2-216ENST00000565344 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
EARS2-216ENST00000565344 UHRF1BP1Q6BDS2 1440 aa17.46■□□□□ 0.39
EARS2-216ENST00000565344 CLIP1P30622 1438 aa17.45■□□□□ 0.38
EARS2-216ENST00000565344 IQSEC2Q5JU85 1478 aa17.44■□□□□ 0.38
EARS2-216ENST00000565344 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
EARS2-216ENST00000565344 C3P01024 1663 aa17.39■□□□□ 0.37
EARS2-216ENST00000565344 NCOA1Q15788 1441 aa17.38■□□□□ 0.37
EARS2-216ENST00000565344 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
EARS2-216ENST00000565344 KDM5CP41229 1560 aa17.36■□□□□ 0.37
EARS2-216ENST00000565344 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
EARS2-216ENST00000565344 TRAPPC8Q9Y2L5 1435 aa17.35■□□□□ 0.37
EARS2-216ENST00000565344 EFCAB2Q5VUJ9 269 aa17.34■□□□□ 0.37
EARS2-216ENST00000565344 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
EARS2-216ENST00000565344 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
EARS2-216ENST00000565344 DIP2CQ9Y2E4 1556 aa17.34■□□□□ 0.37
EARS2-216ENST00000565344 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
EARS2-216ENST00000565344 AGLP35573 1532 aa17.3■□□□□ 0.36
EARS2-216ENST00000565344 MYO5CQ9NQX4 1742 aa17.3■□□□□ 0.36
EARS2-216ENST00000565344 ZNF335Q9H4Z2 1342 aaPredicted RBP17.29■□□□□ 0.36
EARS2-216ENST00000565344 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
EARS2-216ENST00000565344 MLH3Q9UHC1 1453 aa17.28■□□□□ 0.36
EARS2-216ENST00000565344 UBAP1LF5GYI3 381 aa17.27■□□□□ 0.36
EARS2-216ENST00000565344 CAMSAP1Q5T5Y3 1602 aa17.27■□□□□ 0.36
EARS2-216ENST00000565344 KIF14Q15058 1648 aa17.26■□□□□ 0.35
EARS2-216ENST00000565344 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
EARS2-216ENST00000565344 CASKIN1Q8WXD9 1431 aa17.25■□□□□ 0.35
EARS2-216ENST00000565344 LRRIQ1Q96JM4 1722 aa17.23■□□□□ 0.35
EARS2-216ENST00000565344 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
EARS2-216ENST00000565344 NPATQ14207 1427 aa17.21■□□□□ 0.35
EARS2-216ENST00000565344 MED1Q15648 1581 aaPredicted RBP17.21■□□□□ 0.35
EARS2-216ENST00000565344 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
EARS2-216ENST00000565344 ATP1B4Q9UN42 357 aaPredicted RBP17.2■□□□□ 0.34
EARS2-216ENST00000565344 CDC42BPBQ9Y5S2 1711 aa17.2■□□□□ 0.34
EARS2-216ENST00000565344 ARHGAP5Q13017 1502 aa17.2■□□□□ 0.34
EARS2-216ENST00000565344 CNTLNQ9NXG0 1405 aa17.2■□□□□ 0.34
EARS2-216ENST00000565344 KIDINS220Q9ULH0 1771 aa17.2■□□□□ 0.34
EARS2-216ENST00000565344 HSPA1LP34931 641 aa17.19■□□□□ 0.34
EARS2-216ENST00000565344 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
EARS2-216ENST00000565344 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
EARS2-216ENST00000565344 TROQ12816 1431 aaPredicted RBP17.18■□□□□ 0.34
EARS2-216ENST00000565344 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
EARS2-216ENST00000565344 PLA2R1Q13018 1463 aa17.17■□□□□ 0.34
EARS2-216ENST00000565344 ESF1Q9H501 851 aaKnown RBP17.16■□□□□ 0.34
EARS2-216ENST00000565344 MYT1LQ9UL68 1186 aa17.16■□□□□ 0.34
EARS2-216ENST00000565344 PKD2Q13563 968 aa17.15■□□□□ 0.34
EARS2-216ENST00000565344 ABCC1P33527 1531 aa17.15■□□□□ 0.34
EARS2-216ENST00000565344 CCDC18Q5T9S5 1454 aa17.14■□□□□ 0.33
EARS2-216ENST00000565344 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
EARS2-216ENST00000565344 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
EARS2-216ENST00000565344 ITSN2Q9NZM3 1697 aa17.13■□□□□ 0.33
EARS2-216ENST00000565344 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
EARS2-216ENST00000565344 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
EARS2-216ENST00000565344 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
EARS2-216ENST00000565344 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
EARS2-216ENST00000565344 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
EARS2-216ENST00000565344 SAMD9LQ8IVG5 1584 aa17.07■□□□□ 0.32
EARS2-216ENST00000565344 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
EARS2-216ENST00000565344 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
EARS2-216ENST00000565344 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
EARS2-216ENST00000565344 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
EARS2-216ENST00000565344 MAP3K1Q13233 1512 aa17.06■□□□□ 0.32
EARS2-216ENST00000565344 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
EARS2-216ENST00000565344 PLXNC1O60486 1568 aa17.03■□□□□ 0.32
EARS2-216ENST00000565344 TOM1O60784 492 aa17.03■□□□□ 0.32
EARS2-216ENST00000565344 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
EARS2-216ENST00000565344 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
EARS2-216ENST00000565344 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.32
EARS2-216ENST00000565344 CPS1P31327 1500 aa17.01■□□□□ 0.31
EARS2-216ENST00000565344 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
EARS2-216ENST00000565344 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
EARS2-216ENST00000565344 RGS17Q9UGC6 210 aaPredicted RBP17■□□□□ 0.31
EARS2-216ENST00000565344 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
EARS2-216ENST00000565344 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
EARS2-216ENST00000565344 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
EARS2-216ENST00000565344 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
EARS2-216ENST00000565344 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
EARS2-216ENST00000565344 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
EARS2-216ENST00000565344 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
EARS2-216ENST00000565344 APLP2Q06481 763 aa16.97■□□□□ 0.31
EARS2-216ENST00000565344 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms