RNA–Protein interactions for RNA: ENST00000565328.5

KLHDC4-214, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-214ENST00000565328 SPATA31D1Q6ZQQ2 1576 aa22.39■■□□□ 1.18
KLHDC4-214ENST00000565328 STRCQ7RTU9 1775 aa22.37■■□□□ 1.17
KLHDC4-214ENST00000565328 PLEKHD1A6NEE1 506 aa22.36■■□□□ 1.17
KLHDC4-214ENST00000565328 CEBPAP49715 358 aaPredicted RBP22.33■■□□□ 1.17
KLHDC4-214ENST00000565328 MAGI2Q86UL8 1455 aa22.33■■□□□ 1.16
KLHDC4-214ENST00000565328 ARHGEF12Q9NZN5 1544 aa22.31■■□□□ 1.16
KLHDC4-214ENST00000565328 SCAPERQ9BY12 1400 aa22.29■■□□□ 1.16
KLHDC4-214ENST00000565328 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
KLHDC4-214ENST00000565328 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
KLHDC4-214ENST00000565328 ATP10AO60312 1499 aa22.25■■□□□ 1.15
KLHDC4-214ENST00000565328 CDK13Q14004 1512 aaKnown RBP22.25■■□□□ 1.15
KLHDC4-214ENST00000565328 UHRF1BP1Q6BDS2 1440 aa22.24■■□□□ 1.15
KLHDC4-214ENST00000565328 MYO5CQ9NQX4 1742 aa22.21■■□□□ 1.15
KLHDC4-214ENST00000565328 CSRNP3Q8WYN3 585 aa22.2■■□□□ 1.14
KLHDC4-214ENST00000565328 PLCH2O75038 1416 aa22.19■■□□□ 1.14
KLHDC4-214ENST00000565328 SETD1BQ9UPS6 1966 aaKnown RBP22.18■■□□□ 1.14
KLHDC4-214ENST00000565328 C3P01024 1663 aa22.17■■□□□ 1.14
KLHDC4-214ENST00000565328 MYT1LQ9UL68 1186 aa22.14■■□□□ 1.13
KLHDC4-214ENST00000565328 LTBP4Q8N2S1 1624 aa22.13■■□□□ 1.13
KLHDC4-214ENST00000565328 PTPRTO14522 1441 aa22.13■■□□□ 1.13
KLHDC4-214ENST00000565328 DIP2CQ9Y2E4 1556 aa22.11■■□□□ 1.13
KLHDC4-214ENST00000565328 ZNF518AQ6AHZ1 1483 aa22.1■■□□□ 1.13
KLHDC4-214ENST00000565328 KIF14Q15058 1648 aa22.1■■□□□ 1.13
KLHDC4-214ENST00000565328 EFCAB2Q5VUJ9 269 aa22.1■■□□□ 1.13
KLHDC4-214ENST00000565328 ATP1B4Q9UN42 357 aaPredicted RBP22.1■■□□□ 1.13
KLHDC4-214ENST00000565328 ABCA6Q8N139 1617 aa22.08■■□□□ 1.13
KLHDC4-214ENST00000565328 KDM5CP41229 1560 aa22.08■■□□□ 1.12
KLHDC4-214ENST00000565328 ARHGAP5Q13017 1502 aa22.07■■□□□ 1.12
KLHDC4-214ENST00000565328 AFAP1Q8N556 730 aa22.07■■□□□ 1.12
KLHDC4-214ENST00000565328 IQSEC2Q5JU85 1478 aa22.04■■□□□ 1.12
KLHDC4-214ENST00000565328 ESF1Q9H501 851 aaKnown RBP22.04■■□□□ 1.12
KLHDC4-214ENST00000565328 REREQ9P2R6 1566 aa22.02■■□□□ 1.12
KLHDC4-214ENST00000565328 NCOA1Q15788 1441 aa22.01■■□□□ 1.11
KLHDC4-214ENST00000565328 CDC42BPBQ9Y5S2 1711 aa22■■□□□ 1.11
KLHDC4-214ENST00000565328 CAMSAP1Q5T5Y3 1602 aa21.99■■□□□ 1.11
KLHDC4-214ENST00000565328 TRAPPC8Q9Y2L5 1435 aa21.99■■□□□ 1.11
KLHDC4-214ENST00000565328 UBAP1LF5GYI3 381 aa21.96■■□□□ 1.11
KLHDC4-214ENST00000565328 SUPT6HQ7KZ85 1726 aaKnown RBP21.95■■□□□ 1.1
KLHDC4-214ENST00000565328 LRRIQ1Q96JM4 1722 aa21.95■■□□□ 1.1
KLHDC4-214ENST00000565328 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
KLHDC4-214ENST00000565328 AGLP35573 1532 aa21.95■■□□□ 1.1
KLHDC4-214ENST00000565328 ITSN2Q9NZM3 1697 aa21.95■■□□□ 1.1
KLHDC4-214ENST00000565328 CDK11AQ9UQ88 783 aaPredicted RBP21.94■■□□□ 1.1
KLHDC4-214ENST00000565328 EEA1Q15075 1411 aa21.94■■□□□ 1.1
KLHDC4-214ENST00000565328 MLH3Q9UHC1 1453 aa21.94■■□□□ 1.1
KLHDC4-214ENST00000565328 ZNF335Q9H4Z2 1342 aaPredicted RBP21.93■■□□□ 1.1
KLHDC4-214ENST00000565328 KIDINS220Q9ULH0 1771 aa21.92■■□□□ 1.1
KLHDC4-214ENST00000565328 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
KLHDC4-214ENST00000565328 NCKAP5LQ9HCH0 1330 aa21.92■■□□□ 1.1
KLHDC4-214ENST00000565328 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
KLHDC4-214ENST00000565328 ABCC1P33527 1531 aa21.9■■□□□ 1.1
KLHDC4-214ENST00000565328 CLIP1P30622 1438 aa21.9■■□□□ 1.1
KLHDC4-214ENST00000565328 FMN1Q68DA7 1419 aa21.9■■□□□ 1.1
KLHDC4-214ENST00000565328 MROH2AA6NES4 1674 aa21.9■■□□□ 1.1
KLHDC4-214ENST00000565328 CNTLNQ9NXG0 1405 aa21.89■■□□□ 1.09
KLHDC4-214ENST00000565328 MYO3AQ8NEV4 1616 aa21.86■■□□□ 1.09
KLHDC4-214ENST00000565328 CLTCQ00610 1675 aaKnown RBP21.85■■□□□ 1.09
KLHDC4-214ENST00000565328 ARHGAP35Q9NRY4 1499 aa21.84■■□□□ 1.09
KLHDC4-214ENST00000565328 ZNF142P52746 1687 aaPredicted RBP21.84■■□□□ 1.09
KLHDC4-214ENST00000565328 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
KLHDC4-214ENST00000565328 MED1Q15648 1581 aaPredicted RBP21.83■■□□□ 1.09
KLHDC4-214ENST00000565328 NPATQ14207 1427 aa21.83■■□□□ 1.09
KLHDC4-214ENST00000565328 CDC42BPAQ5VT25 1732 aa21.82■■□□□ 1.08
KLHDC4-214ENST00000565328 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
KLHDC4-214ENST00000565328 ZMYM3Q14202 1370 aa21.8■■□□□ 1.08
KLHDC4-214ENST00000565328 UBTFP17480 764 aaKnown RBP21.8■■□□□ 1.08
KLHDC4-214ENST00000565328 SAMD9LQ8IVG5 1584 aa21.78■■□□□ 1.08
KLHDC4-214ENST00000565328 PIP4K2BP78356 416 aa21.77■■□□□ 1.08
KLHDC4-214ENST00000565328 PLA2R1Q13018 1463 aa21.77■■□□□ 1.07
KLHDC4-214ENST00000565328 HSPA1LP34931 641 aa21.76■■□□□ 1.07
KLHDC4-214ENST00000565328 ZNF777Q9ULD5 760 aaPredicted RBP21.75■■□□□ 1.07
KLHDC4-214ENST00000565328 TCOF1Q13428 1488 aaKnown RBP21.75■■□□□ 1.07
KLHDC4-214ENST00000565328 PKD2Q13563 968 aa21.74■■□□□ 1.07
KLHDC4-214ENST00000565328 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
KLHDC4-214ENST00000565328 SYCP2Q9BX26 1530 aa21.73■■□□□ 1.07
KLHDC4-214ENST00000565328 PTPRKQ15262 1439 aa21.71■■□□□ 1.07
KLHDC4-214ENST00000565328 POLR1AO95602 1720 aaPredicted RBP21.7■■□□□ 1.06
KLHDC4-214ENST00000565328 SPAG9O60271 1321 aaKnown RBP21.69■■□□□ 1.06
KLHDC4-214ENST00000565328 ATP7AQ04656 1500 aa21.69■■□□□ 1.06
KLHDC4-214ENST00000565328 PLXNC1O60486 1568 aa21.67■■□□□ 1.06
KLHDC4-214ENST00000565328 GGT6Q6P531 493 aa21.67■■□□□ 1.06
KLHDC4-214ENST00000565328 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
KLHDC4-214ENST00000565328 DNMT1P26358 1616 aaKnown RBP21.66■■□□□ 1.06
KLHDC4-214ENST00000565328 INO80Q9ULG1 1556 aaPredicted RBP21.66■■□□□ 1.06
KLHDC4-214ENST00000565328 CCDC18Q5T9S5 1454 aa21.66■■□□□ 1.06
KLHDC4-214ENST00000565328 HNRNPMP52272 730 aaKnown RBP eCLIP21.66■■□□□ 1.066e-7■■■■□ 21.5
KLHDC4-214ENST00000565328 TOM1O60784 492 aa21.64■■□□□ 1.05
KLHDC4-214ENST00000565328 A2MP01023 1474 aa21.64■■□□□ 1.05
KLHDC4-214ENST00000565328 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
KLHDC4-214ENST00000565328 CPS1P31327 1500 aa21.62■■□□□ 1.05
KLHDC4-214ENST00000565328 A2ML1A8K2U0 1454 aa21.62■■□□□ 1.05
KLHDC4-214ENST00000565328 NEURL4Q96JN8 1562 aa21.61■■□□□ 1.05
KLHDC4-214ENST00000565328 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
KLHDC4-214ENST00000565328 ADGBQ8N7X0 1667 aa21.6■■□□□ 1.05
KLHDC4-214ENST00000565328 SHANK2Q9UPX8 1470 aa21.59■■□□□ 1.05
KLHDC4-214ENST00000565328 GPATCH8Q9UKJ3 1502 aaKnown RBP21.58■■□□□ 1.04
KLHDC4-214ENST00000565328 ALKQ9UM73 1620 aa21.54■■□□□ 1.04
KLHDC4-214ENST00000565328 VWDEQ8N2E2 1590 aa21.53■■□□□ 1.04
KLHDC4-214ENST00000565328 CFDP1Q9UEE9 299 aaPredicted RBP21.51■■□□□ 1.03
KLHDC4-214ENST00000565328 PLEKHH2Q8IVE3 1493 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms