RNA–Protein interactions for RNA: ENST00000564872.1

LINC01904-201, Transcript of long intergenic non-protein coding RNA 1904, humanhuman

TSL 1 (best) BASIC

Gene LINC01904, Length 861 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01904-201ENST00000564872 G3V3G9 751 aa9.94□□□□□ -0.82
LINC01904-201ENST00000564872 NCAPD3P42695 1498 aa9.93□□□□□ -0.82
LINC01904-201ENST00000564872 VGFO15240 615 aaPredicted RBP9.92□□□□□ -0.82
LINC01904-201ENST00000564872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.91□□□□□ -0.82
LINC01904-201ENST00000564872 ZFP91Q96JP5 570 aaPredicted RBP9.91□□□□□ -0.82
LINC01904-201ENST00000564872 SOX12O15370 315 aa9.9□□□□□ -0.82
LINC01904-201ENST00000564872 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
LINC01904-201ENST00000564872 HMGXB3Q12766 1538 aa9.9□□□□□ -0.82
LINC01904-201ENST00000564872 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
LINC01904-201ENST00000564872 NESP48681 1621 aa9.85□□□□□ -0.83
LINC01904-201ENST00000564872 TAOK2Q9UL54 1235 aa9.84□□□□□ -0.83
LINC01904-201ENST00000564872 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
LINC01904-201ENST00000564872 EMP3P54852 163 aa9.83□□□□□ -0.84
LINC01904-201ENST00000564872 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
LINC01904-201ENST00000564872 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
LINC01904-201ENST00000564872 PHF8Q9UPP1 1060 aa9.82□□□□□ -0.84
LINC01904-201ENST00000564872 CCDC88BA6NC98 1476 aa9.81□□□□□ -0.84
LINC01904-201ENST00000564872 BCL11BQ9C0K0 894 aaPredicted RBP9.8□□□□□ -0.84
LINC01904-201ENST00000564872 ECM2O94769 699 aaPredicted RBP9.78□□□□□ -0.84
LINC01904-201ENST00000564872 DOK7Q18PE1 504 aa9.78□□□□□ -0.84
LINC01904-201ENST00000564872 POTEB3A0JP26 581 aa9.77□□□□□ -0.85
LINC01904-201ENST00000564872 FAM205CA6NFA0 338 aa9.77□□□□□ -0.85
LINC01904-201ENST00000564872 NLRP6P59044 892 aa9.77□□□□□ -0.85
LINC01904-201ENST00000564872 POTEBQ6S5H4 581 aa9.77□□□□□ -0.85
LINC01904-201ENST00000564872 TMEM92Q6UXU6 159 aa9.77□□□□□ -0.85
LINC01904-201ENST00000564872 HS3ST6Q96QI5 342 aa9.77□□□□□ -0.85
LINC01904-201ENST00000564872 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
LINC01904-201ENST00000564872 PKD2Q13563 968 aa9.76□□□□□ -0.85
LINC01904-201ENST00000564872 ZNF710Q8N1W2 664 aa9.76□□□□□ -0.85
LINC01904-201ENST00000564872 FBXO22Q8NEZ5 403 aa9.76□□□□□ -0.85
LINC01904-201ENST00000564872 STK24Q9Y6E0 443 aa9.76□□□□□ -0.85
LINC01904-201ENST00000564872 KIF21AQ7Z4S6 1674 aa9.75□□□□□ -0.85
LINC01904-201ENST00000564872 SPNS2Q8IVW8 549 aa9.75□□□□□ -0.85
LINC01904-201ENST00000564872 STK25O00506 426 aa9.73□□□□□ -0.85
LINC01904-201ENST00000564872 RIMBP2O15034 1052 aa9.72□□□□□ -0.85
LINC01904-201ENST00000564872 MFRPQ9BY79 579 aa9.72□□□□□ -0.85
LINC01904-201ENST00000564872 RGL2O15211 777 aa9.71□□□□□ -0.86
LINC01904-201ENST00000564872 MMRN1Q13201 1228 aa9.71□□□□□ -0.86
LINC01904-201ENST00000564872 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
LINC01904-201ENST00000564872 KRTAP3-2Q9BYR7 98 aa9.7□□□□□ -0.86
LINC01904-201ENST00000564872 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
LINC01904-201ENST00000564872 ZSWIM6Q9HCJ5 1215 aa9.69□□□□□ -0.86
LINC01904-201ENST00000564872 LAMC3Q9Y6N6 1575 aa9.68□□□□□ -0.86
LINC01904-201ENST00000564872 CADPSQ9ULU8 1353 aa9.67□□□□□ -0.86
LINC01904-201ENST00000564872 ERBB3P21860 1342 aa9.67□□□□□ -0.86
LINC01904-201ENST00000564872 GPR153Q6NV75 609 aa9.65□□□□□ -0.86
LINC01904-201ENST00000564872 CFTRP13569 1480 aa9.65□□□□□ -0.87
LINC01904-201ENST00000564872 ERCC6Q03468 1493 aa9.64□□□□□ -0.87
LINC01904-201ENST00000564872 KIF3CO14782 793 aa9.61□□□□□ -0.87
LINC01904-201ENST00000564872 VARS2Q5ST30 1063 aaKnown RBP9.61□□□□□ -0.87
LINC01904-201ENST00000564872 FANCD2Q9BXW9 1451 aa9.6□□□□□ -0.87
LINC01904-201ENST00000564872 THOC2Q8NI27 1593 aaKnown RBP9.6□□□□□ -0.87
LINC01904-201ENST00000564872 ABCC8Q09428 1581 aa9.59□□□□□ -0.87
LINC01904-201ENST00000564872 ARSIQ5FYB1 569 aa9.59□□□□□ -0.87
LINC01904-201ENST00000564872 C2orf72A6NCS6 295 aa9.58□□□□□ -0.88
LINC01904-201ENST00000564872 PDS5BQ9NTI5 1447 aa9.56□□□□□ -0.88
LINC01904-201ENST00000564872 CEP164Q9UPV0 1460 aa9.56□□□□□ -0.88
LINC01904-201ENST00000564872 ZNF687Q8N1G0 1237 aa9.56□□□□□ -0.88
LINC01904-201ENST00000564872 URB2Q14146 1524 aaKnown RBP9.56□□□□□ -0.88
LINC01904-201ENST00000564872 PPP1R37O75864 691 aa9.54□□□□□ -0.88
LINC01904-201ENST00000564872 HS6ST3Q8IZP7 471 aa9.53□□□□□ -0.88
LINC01904-201ENST00000564872 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC01904-201ENST00000564872 TMC2Q8TDI7 906 aa9.52□□□□□ -0.89
LINC01904-201ENST00000564872 MRC2Q9UBG0 1479 aa9.52□□□□□ -0.89
LINC01904-201ENST00000564872 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
LINC01904-201ENST00000564872 SLC34A2O95436 690 aa9.51□□□□□ -0.89
LINC01904-201ENST00000564872 CUX1P39880 1505 aa9.51□□□□□ -0.89
LINC01904-201ENST00000564872 SYNJ1O43426 1573 aa9.5□□□□□ -0.89
LINC01904-201ENST00000564872 WDR62O43379 1518 aa9.48□□□□□ -0.89
LINC01904-201ENST00000564872 TOPBP1Q92547 1522 aa9.48□□□□□ -0.89
LINC01904-201ENST00000564872 PCDHGA4Q9Y5G9 962 aa9.47□□□□□ -0.89
LINC01904-201ENST00000564872 DNMBPQ6XZF7 1577 aa9.46□□□□□ -0.89
LINC01904-201ENST00000564872 NUDT7P0C024 238 aa9.46□□□□□ -0.9
LINC01904-201ENST00000564872 CHGAP10645 457 aaKnown RBP9.46□□□□□ -0.9
LINC01904-201ENST00000564872 RAD54L2Q9Y4B4 1467 aa9.45□□□□□ -0.9
LINC01904-201ENST00000564872 DNAJC5Q9H3Z4 198 aa9.44□□□□□ -0.9
LINC01904-201ENST00000564872 BIVM-ERCC5R4GMW8 1640 aa9.43□□□□□ -0.9
LINC01904-201ENST00000564872 CUX2O14529 1486 aa9.43□□□□□ -0.9
LINC01904-201ENST00000564872 FGD5Q6ZNL6 1462 aa9.43□□□□□ -0.9
LINC01904-201ENST00000564872 WRNQ14191 1432 aaPredicted RBP eCLIP9.42□□□□□ -0.9
LINC01904-201ENST00000564872 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
LINC01904-201ENST00000564872 MYT1LQ9UL68 1186 aa9.42□□□□□ -0.9
LINC01904-201ENST00000564872 LHX6Q9UPM6 363 aa9.42□□□□□ -0.9
LINC01904-201ENST00000564872 PTGER2P43116 358 aa9.41□□□□□ -0.9
LINC01904-201ENST00000564872 FOXK1P85037 733 aa9.41□□□□□ -0.9
LINC01904-201ENST00000564872 GPHNQ9NQX3 736 aaPredicted RBP9.41□□□□□ -0.9
LINC01904-201ENST00000564872 TOP2BQ02880 1626 aa9.41□□□□□ -0.9
LINC01904-201ENST00000564872 POLA1P09884 1462 aaPredicted RBP9.4□□□□□ -0.9
LINC01904-201ENST00000564872 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.9
LINC01904-201ENST00000564872 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.9
LINC01904-201ENST00000564872 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
LINC01904-201ENST00000564872 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.91
LINC01904-201ENST00000564872 PBX2P40425 430 aa9.39□□□□□ -0.91
LINC01904-201ENST00000564872 LSM11P83369 360 aaKnown RBP eCLIP9.39□□□□□ -0.91
LINC01904-201ENST00000564872 NKX1-1Q15270 411 aaPredicted RBP9.39□□□□□ -0.91
LINC01904-201ENST00000564872 WDR97A6NE52 1622 aa9.38□□□□□ -0.91
LINC01904-201ENST00000564872 KDM4FA0A1W2PPD8 638 aa9.38□□□□□ -0.91
LINC01904-201ENST00000564872 PLPP6Q8IY26 295 aa9.38□□□□□ -0.91
LINC01904-201ENST00000564872 DSG2Q14126 1118 aa9.36□□□□□ -0.91
LINC01904-201ENST00000564872 POTEEQ6S8J3 1075 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms