RNA–Protein interactions for RNA: ENST00000563955.5

KCTD13-204, Transcript of potassium channel tetramerization domain containing 13, humanhuman

TSL 3

Gene KCTD13, Length 806 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD13-204ENST00000563955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.91■■□□□ 1.58
KCTD13-204ENST00000563955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
KCTD13-204ENST00000563955 MLECQ14165 292 aa24.84■■□□□ 1.57
KCTD13-204ENST00000563955 HNRNPUL2Q1KMD3 747 aaKnown RBP24.84■■□□□ 1.57
KCTD13-204ENST00000563955 DMRT2Q9Y5R5 561 aa24.8■■□□□ 1.56
KCTD13-204ENST00000563955 LTBP4Q8N2S1 1624 aa24.79■■□□□ 1.56
KCTD13-204ENST00000563955 C3P01024 1663 aa24.78■■□□□ 1.56
KCTD13-204ENST00000563955 C9orf84Q5VXU9 1444 aa24.77■■□□□ 1.56
KCTD13-204ENST00000563955 ATP10AO60312 1499 aa24.77■■□□□ 1.56
KCTD13-204ENST00000563955 IQSEC2Q5JU85 1478 aa24.77■■□□□ 1.56
KCTD13-204ENST00000563955 PTPRTO14522 1441 aa24.76■■□□□ 1.55
KCTD13-204ENST00000563955 UHRF1BP1Q6BDS2 1440 aa24.76■■□□□ 1.55
KCTD13-204ENST00000563955 MYO5CQ9NQX4 1742 aa24.75■■□□□ 1.55
KCTD13-204ENST00000563955 CEBPAP49715 358 aaPredicted RBP24.73■■□□□ 1.55
KCTD13-204ENST00000563955 PLEKHD1A6NEE1 506 aa24.72■■□□□ 1.55
KCTD13-204ENST00000563955 SCAPERQ9BY12 1400 aa24.71■■□□□ 1.55
KCTD13-204ENST00000563955 PLCH2O75038 1416 aa24.65■■□□□ 1.54
KCTD13-204ENST00000563955 KDM5CP41229 1560 aa24.64■■□□□ 1.54
KCTD13-204ENST00000563955 REREQ9P2R6 1566 aa24.63■■□□□ 1.53
KCTD13-204ENST00000563955 DIP2CQ9Y2E4 1556 aa24.63■■□□□ 1.53
KCTD13-204ENST00000563955 CDK13Q14004 1512 aaKnown RBP24.62■■□□□ 1.53
KCTD13-204ENST00000563955 ABCA6Q8N139 1617 aa24.6■■□□□ 1.53
KCTD13-204ENST00000563955 NCOA1Q15788 1441 aa24.58■■□□□ 1.53
KCTD13-204ENST00000563955 ZNF518AQ6AHZ1 1483 aa24.58■■□□□ 1.52
KCTD13-204ENST00000563955 KIF14Q15058 1648 aa24.53■■□□□ 1.52
KCTD13-204ENST00000563955 CSRNP3Q8WYN3 585 aa24.53■■□□□ 1.52
KCTD13-204ENST00000563955 SUPT6HQ7KZ85 1726 aaKnown RBP24.52■■□□□ 1.52
KCTD13-204ENST00000563955 CAMSAP1Q5T5Y3 1602 aa24.51■■□□□ 1.51
KCTD13-204ENST00000563955 AGLP35573 1532 aa24.51■■□□□ 1.51
KCTD13-204ENST00000563955 MROH2AA6NES4 1674 aa24.5■■□□□ 1.51
KCTD13-204ENST00000563955 TRAPPC8Q9Y2L5 1435 aa24.5■■□□□ 1.51
KCTD13-204ENST00000563955 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
KCTD13-204ENST00000563955 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
KCTD13-204ENST00000563955 EFCAB2Q5VUJ9 269 aa24.47■■□□□ 1.51
KCTD13-204ENST00000563955 ZNF142P52746 1687 aaPredicted RBP24.46■■□□□ 1.51
KCTD13-204ENST00000563955 MED1Q15648 1581 aaPredicted RBP24.46■■□□□ 1.51
KCTD13-204ENST00000563955 ARHGAP5Q13017 1502 aa24.45■■□□□ 1.51
KCTD13-204ENST00000563955 ITSN2Q9NZM3 1697 aa24.44■■□□□ 1.5
KCTD13-204ENST00000563955 KIDINS220Q9ULH0 1771 aa24.43■■□□□ 1.5
KCTD13-204ENST00000563955 MLH3Q9UHC1 1453 aa24.43■■□□□ 1.5
KCTD13-204ENST00000563955 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
KCTD13-204ENST00000563955 AFAP1Q8N556 730 aa24.41■■□□□ 1.5
KCTD13-204ENST00000563955 MYO3AQ8NEV4 1616 aa24.4■■□□□ 1.5
KCTD13-204ENST00000563955 UBAP1LF5GYI3 381 aa24.4■■□□□ 1.5
KCTD13-204ENST00000563955 CNTLNQ9NXG0 1405 aa24.4■■□□□ 1.5
KCTD13-204ENST00000563955 ZNF335Q9H4Z2 1342 aaPredicted RBP24.38■■□□□ 1.49
KCTD13-204ENST00000563955 PREX2Q70Z35 1606 aa24.38■■□□□ 1.49
KCTD13-204ENST00000563955 NPATQ14207 1427 aa24.37■■□□□ 1.49
KCTD13-204ENST00000563955 ABCC1P33527 1531 aa24.37■■□□□ 1.49
KCTD13-204ENST00000563955 EEA1Q15075 1411 aa24.35■■□□□ 1.49
KCTD13-204ENST00000563955 ESF1Q9H501 851 aaKnown RBP24.34■■□□□ 1.49
KCTD13-204ENST00000563955 PLA2R1Q13018 1463 aa24.33■■□□□ 1.49
KCTD13-204ENST00000563955 MYT1LQ9UL68 1186 aa24.33■■□□□ 1.49
KCTD13-204ENST00000563955 CLTCQ00610 1675 aaKnown RBP24.33■■□□□ 1.49
KCTD13-204ENST00000563955 TROQ12816 1431 aaPredicted RBP24.31■■□□□ 1.48
KCTD13-204ENST00000563955 CEP170BQ9Y4F5 1589 aaPredicted RBP24.31■■□□□ 1.48
KCTD13-204ENST00000563955 NCKAP5LQ9HCH0 1330 aa24.31■■□□□ 1.48
KCTD13-204ENST00000563955 TCOF1Q13428 1488 aaKnown RBP24.3■■□□□ 1.48
KCTD13-204ENST00000563955 CDC42BPAQ5VT25 1732 aa24.29■■□□□ 1.48
KCTD13-204ENST00000563955 POLR1AO95602 1720 aaPredicted RBP24.28■■□□□ 1.48
KCTD13-204ENST00000563955 CLIP1P30622 1438 aa24.25■■□□□ 1.47
KCTD13-204ENST00000563955 FMN1Q68DA7 1419 aa24.24■■□□□ 1.47
KCTD13-204ENST00000563955 CDK11AQ9UQ88 783 aaPredicted RBP24.23■■□□□ 1.47
KCTD13-204ENST00000563955 ZMYM3Q14202 1370 aa24.22■■□□□ 1.47
KCTD13-204ENST00000563955 HSPA1LP34931 641 aa24.22■■□□□ 1.47
KCTD13-204ENST00000563955 PKD2Q13563 968 aa24.22■■□□□ 1.47
KCTD13-204ENST00000563955 SAMD9LQ8IVG5 1584 aa24.21■■□□□ 1.47
KCTD13-204ENST00000563955 PLXNC1O60486 1568 aa24.18■■□□□ 1.46
KCTD13-204ENST00000563955 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
KCTD13-204ENST00000563955 CPS1P31327 1500 aa24.17■■□□□ 1.46
KCTD13-204ENST00000563955 DNMT1P26358 1616 aaKnown RBP24.16■■□□□ 1.46
KCTD13-204ENST00000563955 PTPRKQ15262 1439 aa24.16■■□□□ 1.46
KCTD13-204ENST00000563955 NEURL4Q96JN8 1562 aa24.16■■□□□ 1.46
KCTD13-204ENST00000563955 ARHGAP35Q9NRY4 1499 aa24.15■■□□□ 1.46
KCTD13-204ENST00000563955 ALKQ9UM73 1620 aa24.14■■□□□ 1.46
KCTD13-204ENST00000563955 SCAF1Q9H7N4 1312 aaKnown RBP24.13■■□□□ 1.45
KCTD13-204ENST00000563955 PPP6R1Q9UPN7 881 aa24.13■■□□□ 1.45
KCTD13-204ENST00000563955 INO80Q9ULG1 1556 aaPredicted RBP24.12■■□□□ 1.45
KCTD13-204ENST00000563955 PIP4K2BP78356 416 aa24.11■■□□□ 1.45
KCTD13-204ENST00000563955 ATP7AQ04656 1500 aa24.1■■□□□ 1.45
KCTD13-204ENST00000563955 SYCP2Q9BX26 1530 aa24.1■■□□□ 1.45
KCTD13-204ENST00000563955 A2ML1A8K2U0 1454 aa24.09■■□□□ 1.45
KCTD13-204ENST00000563955 ADGBQ8N7X0 1667 aa24.08■■□□□ 1.44
KCTD13-204ENST00000563955 SHANK2Q9UPX8 1470 aa24.07■■□□□ 1.44
KCTD13-204ENST00000563955 TOM1O60784 492 aa24.07■■□□□ 1.44
KCTD13-204ENST00000563955 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
KCTD13-204ENST00000563955 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
KCTD13-204ENST00000563955 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
KCTD13-204ENST00000563955 UBTFP17480 764 aaKnown RBP24.03■■□□□ 1.44
KCTD13-204ENST00000563955 A2MP01023 1474 aa24.02■■□□□ 1.44
KCTD13-204ENST00000563955 CCDC18Q5T9S5 1454 aa24.01■■□□□ 1.43
KCTD13-204ENST00000563955 STRCP1A6NGW2 1772 aa24.01■■□□□ 1.43
KCTD13-204ENST00000563955 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
KCTD13-204ENST00000563955 SPAG9O60271 1321 aaKnown RBP23.99■■□□□ 1.43
KCTD13-204ENST00000563955 DEPDC5O75140 1603 aa23.96■■□□□ 1.43
KCTD13-204ENST00000563955 RNF17Q9BXT8 1623 aaKnown RBP23.96■■□□□ 1.43
KCTD13-204ENST00000563955 IQGAP1P46940 1657 aa23.94■■□□□ 1.42
KCTD13-204ENST00000563955 SYNMO15061 1565 aa23.94■■□□□ 1.42
KCTD13-204ENST00000563955 GPATCH8Q9UKJ3 1502 aaKnown RBP23.92■■□□□ 1.42
KCTD13-204ENST00000563955 GGT6Q6P531 493 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms