RNA–Protein interactions for RNA: ENST00000563678.1

CLUHP3-207, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

BASIC

Gene CLUHP3, Length 1,303 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-207ENST00000563678 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
CLUHP3-207ENST00000563678 ARHGEF12Q9NZN5 1544 aa18.9■□□□□ 0.62
CLUHP3-207ENST00000563678 STRCQ7RTU9 1775 aa18.89■□□□□ 0.61
CLUHP3-207ENST00000563678 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
CLUHP3-207ENST00000563678 HECW1Q76N89 1606 aa18.88■□□□□ 0.61
CLUHP3-207ENST00000563678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLUHP3-207ENST00000563678 UHRF1BP1Q6BDS2 1440 aa18.84■□□□□ 0.61
CLUHP3-207ENST00000563678 SETD1BQ9UPS6 1966 aaKnown RBP18.84■□□□□ 0.61
CLUHP3-207ENST00000563678 ATP10AO60312 1499 aa18.83■□□□□ 0.61
CLUHP3-207ENST00000563678 PTPRTO14522 1441 aa18.83■□□□□ 0.6
CLUHP3-207ENST00000563678 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.6
CLUHP3-207ENST00000563678 CEBPAP49715 358 aaPredicted RBP18.82■□□□□ 0.6
CLUHP3-207ENST00000563678 SCAPERQ9BY12 1400 aa18.8■□□□□ 0.6
CLUHP3-207ENST00000563678 IQSEC2Q5JU85 1478 aa18.8■□□□□ 0.6
CLUHP3-207ENST00000563678 LTBP4Q8N2S1 1624 aa18.78■□□□□ 0.6
CLUHP3-207ENST00000563678 PLCH2O75038 1416 aa18.75■□□□□ 0.59
CLUHP3-207ENST00000563678 NCOA1Q15788 1441 aa18.68■□□□□ 0.58
CLUHP3-207ENST00000563678 ZNF518AQ6AHZ1 1483 aa18.68■□□□□ 0.58
CLUHP3-207ENST00000563678 EFCAB2Q5VUJ9 269 aa18.68■□□□□ 0.58
CLUHP3-207ENST00000563678 C3P01024 1663 aa18.66■□□□□ 0.58
CLUHP3-207ENST00000563678 RANGAP1P46060 587 aaPredicted RBP18.66■□□□□ 0.58
CLUHP3-207ENST00000563678 TRAPPC8Q9Y2L5 1435 aa18.66■□□□□ 0.58
CLUHP3-207ENST00000563678 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
CLUHP3-207ENST00000563678 KDM5CP41229 1560 aa18.65■□□□□ 0.58
CLUHP3-207ENST00000563678 CSRNP3Q8WYN3 585 aa18.65■□□□□ 0.58
CLUHP3-207ENST00000563678 REREQ9P2R6 1566 aa18.65■□□□□ 0.58
CLUHP3-207ENST00000563678 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
CLUHP3-207ENST00000563678 DIP2CQ9Y2E4 1556 aa18.63■□□□□ 0.57
CLUHP3-207ENST00000563678 ESF1Q9H501 851 aaKnown RBP18.62■□□□□ 0.57
CLUHP3-207ENST00000563678 UBAP1LF5GYI3 381 aa18.61■□□□□ 0.57
CLUHP3-207ENST00000563678 AFAP1Q8N556 730 aa18.6■□□□□ 0.57
CLUHP3-207ENST00000563678 AGLP35573 1532 aa18.59■□□□□ 0.57
CLUHP3-207ENST00000563678 MYT1LQ9UL68 1186 aa18.59■□□□□ 0.57
CLUHP3-207ENST00000563678 CNTLNQ9NXG0 1405 aa18.58■□□□□ 0.56
CLUHP3-207ENST00000563678 CAMSAP1Q5T5Y3 1602 aa18.57■□□□□ 0.56
CLUHP3-207ENST00000563678 ABCA6Q8N139 1617 aa18.57■□□□□ 0.56
CLUHP3-207ENST00000563678 ARHGAP5Q13017 1502 aa18.56■□□□□ 0.56
CLUHP3-207ENST00000563678 MLH3Q9UHC1 1453 aa18.56■□□□□ 0.56
CLUHP3-207ENST00000563678 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
CLUHP3-207ENST00000563678 NPATQ14207 1427 aa18.55■□□□□ 0.56
CLUHP3-207ENST00000563678 EEA1Q15075 1411 aa18.54■□□□□ 0.56
CLUHP3-207ENST00000563678 CDK11AQ9UQ88 783 aaPredicted RBP18.53■□□□□ 0.56
CLUHP3-207ENST00000563678 KIF14Q15058 1648 aa18.53■□□□□ 0.56
CLUHP3-207ENST00000563678 MED1Q15648 1581 aaPredicted RBP18.52■□□□□ 0.55
CLUHP3-207ENST00000563678 NCKAP5LQ9HCH0 1330 aa18.5■□□□□ 0.55
CLUHP3-207ENST00000563678 TROQ12816 1431 aaPredicted RBP18.49■□□□□ 0.55
CLUHP3-207ENST00000563678 PKD2Q13563 968 aa18.49■□□□□ 0.55
CLUHP3-207ENST00000563678 PLA2R1Q13018 1463 aa18.48■□□□□ 0.55
CLUHP3-207ENST00000563678 MROH2AA6NES4 1674 aa18.48■□□□□ 0.55
CLUHP3-207ENST00000563678 CLIP1P30622 1438 aa18.47■□□□□ 0.55
CLUHP3-207ENST00000563678 ATP1B4Q9UN42 357 aaPredicted RBP18.47■□□□□ 0.55
CLUHP3-207ENST00000563678 FMN1Q68DA7 1419 aa18.46■□□□□ 0.55
CLUHP3-207ENST00000563678 HSPA1LP34931 641 aa18.46■□□□□ 0.55
CLUHP3-207ENST00000563678 TCOF1Q13428 1488 aaKnown RBP18.45■□□□□ 0.54
CLUHP3-207ENST00000563678 ABCC1P33527 1531 aa18.45■□□□□ 0.54
CLUHP3-207ENST00000563678 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
CLUHP3-207ENST00000563678 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
CLUHP3-207ENST00000563678 KIDINS220Q9ULH0 1771 aa18.43■□□□□ 0.54
CLUHP3-207ENST00000563678 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
CLUHP3-207ENST00000563678 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
CLUHP3-207ENST00000563678 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
CLUHP3-207ENST00000563678 ITSN2Q9NZM3 1697 aa18.41■□□□□ 0.54
CLUHP3-207ENST00000563678 PPP6R1Q9UPN7 881 aa18.41■□□□□ 0.54
CLUHP3-207ENST00000563678 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
CLUHP3-207ENST00000563678 PREX2Q70Z35 1606 aa18.4■□□□□ 0.54
CLUHP3-207ENST00000563678 SUPT6HQ7KZ85 1726 aaKnown RBP18.39■□□□□ 0.53
CLUHP3-207ENST00000563678 TOM1O60784 492 aa18.38■□□□□ 0.53
CLUHP3-207ENST00000563678 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
CLUHP3-207ENST00000563678 PHF23Q9BUL5 403 aaPredicted RBP18.38■□□□□ 0.53
CLUHP3-207ENST00000563678 PTPRKQ15262 1439 aa18.36■□□□□ 0.53
CLUHP3-207ENST00000563678 CPS1P31327 1500 aa18.35■□□□□ 0.53
CLUHP3-207ENST00000563678 CLTCQ00610 1675 aaKnown RBP18.34■□□□□ 0.53
CLUHP3-207ENST00000563678 SAMD9LQ8IVG5 1584 aa18.34■□□□□ 0.53
CLUHP3-207ENST00000563678 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
CLUHP3-207ENST00000563678 LRRIQ1Q96JM4 1722 aa18.3■□□□□ 0.52
CLUHP3-207ENST00000563678 A2ML1A8K2U0 1454 aa18.3■□□□□ 0.52
CLUHP3-207ENST00000563678 SPAG9O60271 1321 aaKnown RBP18.3■□□□□ 0.52
CLUHP3-207ENST00000563678 SHANK2Q9UPX8 1470 aa18.29■□□□□ 0.52
CLUHP3-207ENST00000563678 PLXNC1O60486 1568 aa18.29■□□□□ 0.52
CLUHP3-207ENST00000563678 CDC42BPAQ5VT25 1732 aa18.27■□□□□ 0.52
CLUHP3-207ENST00000563678 DNMT1P26358 1616 aaKnown RBP18.27■□□□□ 0.52
CLUHP3-207ENST00000563678 ATP7AQ04656 1500 aa18.26■□□□□ 0.51
CLUHP3-207ENST00000563678 SYCP2Q9BX26 1530 aa18.26■□□□□ 0.51
CLUHP3-207ENST00000563678 A2MP01023 1474 aa18.26■□□□□ 0.51
CLUHP3-207ENST00000563678 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
CLUHP3-207ENST00000563678 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
CLUHP3-207ENST00000563678 UBTFP17480 764 aaKnown RBP18.24■□□□□ 0.51
CLUHP3-207ENST00000563678 CCDC18Q5T9S5 1454 aa18.24■□□□□ 0.51
CLUHP3-207ENST00000563678 GGT6Q6P531 493 aa18.23■□□□□ 0.51
CLUHP3-207ENST00000563678 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
CLUHP3-207ENST00000563678 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
CLUHP3-207ENST00000563678 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
CLUHP3-207ENST00000563678 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
CLUHP3-207ENST00000563678 HNRNPMP52272 730 aaKnown RBP eCLIP18.2■□□□□ 0.5
CLUHP3-207ENST00000563678 KIAA1107Q9UPP5 1409 aa18.19■□□□□ 0.5
CLUHP3-207ENST00000563678 CASKIN1Q8WXD9 1431 aa18.18■□□□□ 0.5
CLUHP3-207ENST00000563678 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
CLUHP3-207ENST00000563678 TNRQ92752 1358 aa18.18■□□□□ 0.5
CLUHP3-207ENST00000563678 ANKLE2Q86XL3 938 aa18.17■□□□□ 0.5
CLUHP3-207ENST00000563678 GPATCH8Q9UKJ3 1502 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms