RNA–Protein interactions for RNA: ENST00000563629.1

CYLD-205, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-205ENST00000563629 HFM1A2PYH4 1435 aa10.99□□□□□ -0.65
CYLD-205ENST00000563629 NAIPQ13075 1403 aa10.99□□□□□ -0.65
CYLD-205ENST00000563629 ABCA8O94911 1581 aa10.98□□□□□ -0.65
CYLD-205ENST00000563629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.98□□□□□ -0.65
CYLD-205ENST00000563629 CFDP1Q9UEE9 299 aaPredicted RBP10.98□□□□□ -0.65
CYLD-205ENST00000563629 FOXD1Q16676 465 aa10.97□□□□□ -0.65
CYLD-205ENST00000563629 SUPT16HQ9Y5B9 1047 aaKnown RBP10.95□□□□□ -0.66
CYLD-205ENST00000563629 KDM6BO15054 1643 aa10.95□□□□□ -0.66
CYLD-205ENST00000563629 KIF14Q15058 1648 aa10.95□□□□□ -0.66
CYLD-205ENST00000563629 TROQ12816 1431 aaPredicted RBP10.95□□□□□ -0.66
CYLD-205ENST00000563629 ARHGEF11O15085 1522 aa10.95□□□□□ -0.66
CYLD-205ENST00000563629 HNRNPMP52272 730 aaKnown RBP eCLIP10.94□□□□□ -0.66
CYLD-205ENST00000563629 BCANQ96GW7 911 aa10.94□□□□□ -0.66
CYLD-205ENST00000563629 NPM1P06748 294 aaKnown RBP eCLIP10.92□□□□□ -0.66
CYLD-205ENST00000563629 ABCC2Q92887 1545 aa10.92□□□□□ -0.66
CYLD-205ENST00000563629 ANP32CO43423 234 aa10.91□□□□□ -0.66
CYLD-205ENST00000563629 TIMELESSQ9UNS1 1208 aa10.91□□□□□ -0.66
CYLD-205ENST00000563629 GCC2Q8IWJ2 1684 aa10.9□□□□□ -0.67
CYLD-205ENST00000563629 GPATCH8Q9UKJ3 1502 aaKnown RBP10.9□□□□□ -0.67
CYLD-205ENST00000563629 ADCY10Q96PN6 1610 aa10.89□□□□□ -0.67
CYLD-205ENST00000563629 MPHOSPH9Q99550 1183 aa10.87□□□□□ -0.67
CYLD-205ENST00000563629 TCOF1Q13428 1488 aaKnown RBP10.87□□□□□ -0.67
CYLD-205ENST00000563629 DENND4BO75064 1496 aaPredicted RBP10.87□□□□□ -0.67
CYLD-205ENST00000563629 ZCCHC11Q5TAX3 1644 aaKnown RBP10.85□□□□□ -0.67
CYLD-205ENST00000563629 KDM5BQ9UGL1 1544 aa10.85□□□□□ -0.67
CYLD-205ENST00000563629 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
CYLD-205ENST00000563629 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
CYLD-205ENST00000563629 ABCC10Q5T3U5 1492 aa10.85□□□□□ -0.67
CYLD-205ENST00000563629 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
CYLD-205ENST00000563629 FKBP8Q14318 412 aa10.84□□□□□ -0.67
CYLD-205ENST00000563629 DAPK1P53355 1430 aa10.84□□□□□ -0.67
CYLD-205ENST00000563629 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
CYLD-205ENST00000563629 L3MBTL2Q969R5 705 aa10.83□□□□□ -0.68
CYLD-205ENST00000563629 MYT1LQ9UL68 1186 aa10.83□□□□□ -0.68
CYLD-205ENST00000563629 MIA2Q96PC5 1412 aa10.83□□□□□ -0.68
CYLD-205ENST00000563629 ABCC5O15440 1437 aa10.83□□□□□ -0.68
CYLD-205ENST00000563629 TTC37Q6PGP7 1564 aa10.83□□□□□ -0.68
CYLD-205ENST00000563629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.83□□□□□ -0.68
CYLD-205ENST00000563629 SLC4A1APQ9BWU0 796 aaKnown RBP10.82□□□□□ -0.68
CYLD-205ENST00000563629 RIMBP3CA6NJZ7 1639 aa10.82□□□□□ -0.68
CYLD-205ENST00000563629 RIMBP3BA6NNM3 1639 aa10.82□□□□□ -0.68
CYLD-205ENST00000563629 RIMBP3Q9UFD9 1639 aa10.82□□□□□ -0.68
CYLD-205ENST00000563629 CAMSAP2Q08AD1 1489 aa10.82□□□□□ -0.68
CYLD-205ENST00000563629 ZNF326Q5BKZ1 582 aaKnown RBP10.82□□□□□ -0.68
CYLD-205ENST00000563629 UHRF1BP1LA0JNW5 1464 aa10.82□□□□□ -0.68
CYLD-205ENST00000563629 WASHC2AQ641Q2 1341 aa10.81□□□□□ -0.68
CYLD-205ENST00000563629 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
CYLD-205ENST00000563629 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
CYLD-205ENST00000563629 ARHGAP5Q13017 1502 aa10.8□□□□□ -0.68
CYLD-205ENST00000563629 DNMT1P26358 1616 aaKnown RBP10.8□□□□□ -0.68
CYLD-205ENST00000563629 FAM69CQ0P6D2 419 aa10.8□□□□□ -0.68
CYLD-205ENST00000563629 WDR7Q9Y4E6 1490 aa10.79□□□□□ -0.68
CYLD-205ENST00000563629 POLR3GLQ9BT43 218 aa10.79□□□□□ -0.68
CYLD-205ENST00000563629 CCER2I3L3R5 266 aa10.79□□□□□ -0.68
CYLD-205ENST00000563629 EIF4G2P78344 907 aaKnown RBP eCLIP10.79□□□□□ -0.68
CYLD-205ENST00000563629 EFCAB2Q5VUJ9 269 aa10.79□□□□□ -0.68
CYLD-205ENST00000563629 HNRNPUQ00839 825 aaKnown RBP eCLIP10.78□□□□□ -0.68
CYLD-205ENST00000563629 CDC42BPAQ5VT25 1732 aa10.78□□□□□ -0.68
CYLD-205ENST00000563629 NBPF8Q3BBV2 869 aa10.77□□□□□ -0.68
CYLD-205ENST00000563629 AKNAQ7Z591 1439 aa10.77□□□□□ -0.68
CYLD-205ENST00000563629 C11orf95C9JLR9 678 aaPredicted RBP10.77□□□□□ -0.69
CYLD-205ENST00000563629 RAPGEF3O95398 923 aa10.77□□□□□ -0.69
CYLD-205ENST00000563629 NEFLP07196 543 aa10.77□□□□□ -0.69
CYLD-205ENST00000563629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.77□□□□□ -0.69
CYLD-205ENST00000563629 ARHGEF12Q9NZN5 1544 aa10.76□□□□□ -0.69
CYLD-205ENST00000563629 IRX6P78412 446 aaPredicted RBP10.75□□□□□ -0.69
CYLD-205ENST00000563629 PLCH2O75038 1416 aa10.75□□□□□ -0.69
CYLD-205ENST00000563629 CCDC184Q52MB2 194 aa10.75□□□□□ -0.69
CYLD-205ENST00000563629 TRAPPC8Q9Y2L5 1435 aa10.75□□□□□ -0.69
CYLD-205ENST00000563629 SYCP2Q9BX26 1530 aa10.75□□□□□ -0.69
CYLD-205ENST00000563629 CDC42BPBQ9Y5S2 1711 aa10.75□□□□□ -0.69
CYLD-205ENST00000563629 ANKRD30BQ9BXX2 1392 aa10.74□□□□□ -0.69
CYLD-205ENST00000563629 MBD5Q9P267 1494 aa10.74□□□□□ -0.69
CYLD-205ENST00000563629 SAMD9LQ8IVG5 1584 aa10.74□□□□□ -0.69
CYLD-205ENST00000563629 ITSN2Q9NZM3 1697 aa10.74□□□□□ -0.69
CYLD-205ENST00000563629 ROCK1Q13464 1354 aa10.73□□□□□ -0.69
CYLD-205ENST00000563629 NCOA1Q15788 1441 aa10.73□□□□□ -0.69
CYLD-205ENST00000563629 CD109Q6YHK3 1445 aa10.73□□□□□ -0.69
CYLD-205ENST00000563629 FAM9BQ8IZU0 186 aa10.73□□□□□ -0.69
CYLD-205ENST00000563629 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
CYLD-205ENST00000563629 RPRD2Q5VT52 1461 aaKnown RBP10.73□□□□□ -0.69
CYLD-205ENST00000563629 C9orf84Q5VXU9 1444 aa10.73□□□□□ -0.69
CYLD-205ENST00000563629 SENP3-EIF4A1A0A087X0R7 540 aa10.72□□□□□ -0.69
CYLD-205ENST00000563629 FANCAO15360 1455 aa10.72□□□□□ -0.69
CYLD-205ENST00000563629 TEX14Q8IWB6 1497 aa10.72□□□□□ -0.69
CYLD-205ENST00000563629 PKD2Q13563 968 aa10.72□□□□□ -0.69
CYLD-205ENST00000563629 SCAPERQ9BY12 1400 aa10.71□□□□□ -0.69
CYLD-205ENST00000563629 ADGBQ8N7X0 1667 aa10.71□□□□□ -0.69
CYLD-205ENST00000563629 PZPP20742 1482 aa10.71□□□□□ -0.7
CYLD-205ENST00000563629 CNTLNQ9NXG0 1405 aa10.71□□□□□ -0.7
CYLD-205ENST00000563629 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.7
CYLD-205ENST00000563629 KIF15Q9NS87 1388 aa10.7□□□□□ -0.7
CYLD-205ENST00000563629 CCDC7Q96M83 1385 aa10.7□□□□□ -0.7
CYLD-205ENST00000563629 ANKRD30AQ9BXX3 1397 aa10.7□□□□□ -0.7
CYLD-205ENST00000563629 SPAG9O60271 1321 aaKnown RBP10.7□□□□□ -0.7
CYLD-205ENST00000563629 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
CYLD-205ENST00000563629 PREX2Q70Z35 1606 aa10.69□□□□□ -0.7
CYLD-205ENST00000563629 KIF7Q2M1P5 1343 aa10.69□□□□□ -0.7
CYLD-205ENST00000563629 MRS2Q9HD23 443 aa10.69□□□□□ -0.7
CYLD-205ENST00000563629 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms