RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
SNX29-202ENST00000563308 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
SNX29-202ENST00000563308 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
SNX29-202ENST00000563308 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
SNX29-202ENST00000563308 RICTORQ6R327 1708 aa17.13■□□□□ 0.33
SNX29-202ENST00000563308 GOLGA3Q08378 1498 aa17.13■□□□□ 0.33
SNX29-202ENST00000563308 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
SNX29-202ENST00000563308 ARHGEF12Q9NZN5 1544 aa17.12■□□□□ 0.33
SNX29-202ENST00000563308 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
SNX29-202ENST00000563308 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
SNX29-202ENST00000563308 CFAP74Q9C0B2 1584 aa17.08■□□□□ 0.32
SNX29-202ENST00000563308 CSRNP3Q8WYN3 585 aa17.08■□□□□ 0.32
SNX29-202ENST00000563308 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
SNX29-202ENST00000563308 ZMYM4Q5VZL5 1548 aa17.07■□□□□ 0.32
SNX29-202ENST00000563308 ATP10BO94823 1461 aa17.05■□□□□ 0.32
SNX29-202ENST00000563308 ATP10AO60312 1499 aa17.03■□□□□ 0.32
SNX29-202ENST00000563308 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
SNX29-202ENST00000563308 NCKAP5LQ9HCH0 1330 aa17.02■□□□□ 0.32
SNX29-202ENST00000563308 TRAPPC8Q9Y2L5 1435 aa17.02■□□□□ 0.31
SNX29-202ENST00000563308 CAMSAP1Q5T5Y3 1602 aa17.01■□□□□ 0.31
SNX29-202ENST00000563308 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
SNX29-202ENST00000563308 PKD2Q13563 968 aa17■□□□□ 0.31
SNX29-202ENST00000563308 EEA1Q15075 1411 aa17■□□□□ 0.31
SNX29-202ENST00000563308 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
SNX29-202ENST00000563308 HECW1Q76N89 1606 aa16.99■□□□□ 0.31
SNX29-202ENST00000563308 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
SNX29-202ENST00000563308 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
SNX29-202ENST00000563308 C3P01024 1663 aa16.95■□□□□ 0.3
SNX29-202ENST00000563308 PTPRKQ15262 1439 aa16.95■□□□□ 0.3
SNX29-202ENST00000563308 SAMD9Q5K651 1589 aa16.94■□□□□ 0.3
SNX29-202ENST00000563308 RGS17Q9UGC6 210 aaPredicted RBP16.94■□□□□ 0.3
SNX29-202ENST00000563308 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
SNX29-202ENST00000563308 SCAPERQ9BY12 1400 aa16.9■□□□□ 0.3
SNX29-202ENST00000563308 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
SNX29-202ENST00000563308 CPS1P31327 1500 aa16.89■□□□□ 0.29
SNX29-202ENST00000563308 SUPT6HQ7KZ85 1726 aaKnown RBP16.87■□□□□ 0.29
SNX29-202ENST00000563308 POTEAQ6S8J7 498 aa16.86■□□□□ 0.29
SNX29-202ENST00000563308 CNTLNQ9NXG0 1405 aa16.85■□□□□ 0.29
SNX29-202ENST00000563308 PLA2R1Q13018 1463 aa16.85■□□□□ 0.29
SNX29-202ENST00000563308 RANGAP1P46060 587 aaPredicted RBP16.83■□□□□ 0.28
SNX29-202ENST00000563308 RAPGEF6Q8TEU7 1601 aa16.82■□□□□ 0.28
SNX29-202ENST00000563308 NPATQ14207 1427 aa16.82■□□□□ 0.28
SNX29-202ENST00000563308 NUP153P49790 1475 aaKnown RBP16.81■□□□□ 0.28
SNX29-202ENST00000563308 UPF1Q92900 1129 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNX29-202ENST00000563308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNX29-202ENST00000563308 SETD1AO15047 1707 aaKnown RBP16.78■□□□□ 0.28
SNX29-202ENST00000563308 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
SNX29-202ENST00000563308 SHANK2Q9UPX8 1470 aa16.78■□□□□ 0.28
SNX29-202ENST00000563308 EFCAB2Q5VUJ9 269 aa16.76■□□□□ 0.27
SNX29-202ENST00000563308 AGLP35573 1532 aa16.75■□□□□ 0.27
SNX29-202ENST00000563308 ZNF518AQ6AHZ1 1483 aa16.75■□□□□ 0.27
SNX29-202ENST00000563308 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
SNX29-202ENST00000563308 PLCH2O75038 1416 aa16.71■□□□□ 0.27
SNX29-202ENST00000563308 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
SNX29-202ENST00000563308 ZMYM3Q14202 1370 aa16.71■□□□□ 0.27
SNX29-202ENST00000563308 REREQ9P2R6 1566 aa16.71■□□□□ 0.27
SNX29-202ENST00000563308 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
SNX29-202ENST00000563308 ZNF142P52746 1687 aaPredicted RBP16.71■□□□□ 0.27
SNX29-202ENST00000563308 FOXD1Q16676 465 aa16.69■□□□□ 0.26
SNX29-202ENST00000563308 AFAP1Q8N556 730 aa16.69■□□□□ 0.26
SNX29-202ENST00000563308 MYO3AQ8NEV4 1616 aa16.69■□□□□ 0.26
SNX29-202ENST00000563308 DIP2CQ9Y2E4 1556 aa16.68■□□□□ 0.26
SNX29-202ENST00000563308 ARHGAP35Q9NRY4 1499 aa16.68■□□□□ 0.26
SNX29-202ENST00000563308 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
SNX29-202ENST00000563308 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
SNX29-202ENST00000563308 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
SNX29-202ENST00000563308 TRIM52Q96A61 297 aa16.63■□□□□ 0.25
SNX29-202ENST00000563308 FMN1Q68DA7 1419 aa16.62■□□□□ 0.25
SNX29-202ENST00000563308 POLR1AO95602 1720 aaPredicted RBP16.62■□□□□ 0.25
SNX29-202ENST00000563308 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
SNX29-202ENST00000563308 KDM5CP41229 1560 aa16.62■□□□□ 0.25
SNX29-202ENST00000563308 RNF17Q9BXT8 1623 aaKnown RBP16.62■□□□□ 0.25
SNX29-202ENST00000563308 MYO5CQ9NQX4 1742 aa16.6■□□□□ 0.25
SNX29-202ENST00000563308 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
SNX29-202ENST00000563308 MLH3Q9UHC1 1453 aa16.58■□□□□ 0.24
SNX29-202ENST00000563308 A2ML1A8K2U0 1454 aa16.57■□□□□ 0.24
SNX29-202ENST00000563308 VWDEQ8N2E2 1590 aa16.55■□□□□ 0.24
SNX29-202ENST00000563308 ARHGAP5Q13017 1502 aa16.55■□□□□ 0.24
SNX29-202ENST00000563308 ZNF772Q68DY9 489 aaPredicted RBP16.55■□□□□ 0.24
SNX29-202ENST00000563308 CLTCQ00610 1675 aaKnown RBP16.54■□□□□ 0.24
SNX29-202ENST00000563308 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
SNX29-202ENST00000563308 ATP1B4Q9UN42 357 aaPredicted RBP16.54■□□□□ 0.24
SNX29-202ENST00000563308 DNMT1P26358 1616 aaKnown RBP16.54■□□□□ 0.24
SNX29-202ENST00000563308 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
SNX29-202ENST00000563308 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
SNX29-202ENST00000563308 NEURL4Q96JN8 1562 aa16.52■□□□□ 0.24
SNX29-202ENST00000563308 SYNMO15061 1565 aa16.51■□□□□ 0.23
SNX29-202ENST00000563308 THEMISQ8N1K5 641 aaPredicted RBP16.51■□□□□ 0.23
SNX29-202ENST00000563308 NPHP4O75161 1426 aaPredicted RBP16.51■□□□□ 0.23
SNX29-202ENST00000563308 RXRBP28702 533 aa16.5■□□□□ 0.23
SNX29-202ENST00000563308 CDK11AQ9UQ88 783 aaPredicted RBP16.5■□□□□ 0.23
SNX29-202ENST00000563308 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
SNX29-202ENST00000563308 TROQ12816 1431 aaPredicted RBP16.49■□□□□ 0.23
SNX29-202ENST00000563308 CASKIN1Q8WXD9 1431 aa16.49■□□□□ 0.23
SNX29-202ENST00000563308 KIF14Q15058 1648 aa16.48■□□□□ 0.23
SNX29-202ENST00000563308 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
SNX29-202ENST00000563308 GGT6Q6P531 493 aa16.48■□□□□ 0.23
SNX29-202ENST00000563308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.46■□□□□ 0.23
SNX29-202ENST00000563308 RBM33Q96EV2 1170 aaKnown RBP16.44■□□□□ 0.22
SNX29-202ENST00000563308 CLIP1P30622 1438 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms