RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 PLEKHD1A6NEE1 506 aa30.71■■■□□ 2.51
VPS9D1-AS1-202ENST00000562866 SHROOM2Q13796 1616 aa30.7■■■□□ 2.5
VPS9D1-AS1-202ENST00000562866 CFDP1Q9UEE9 299 aaPredicted RBP30.69■■■□□ 2.5
VPS9D1-AS1-202ENST00000562866 CAMSAP2Q08AD1 1489 aa30.69■■■□□ 2.5
VPS9D1-AS1-202ENST00000562866 TONSLQ96HA7 1378 aa30.69■■■□□ 2.5
VPS9D1-AS1-202ENST00000562866 PPP1R15AO75807 674 aaPredicted RBP30.67■■■□□ 2.5
VPS9D1-AS1-202ENST00000562866 ZNF644Q9H582 1327 aaPredicted RBP30.65■■■□□ 2.5
VPS9D1-AS1-202ENST00000562866 KDM6BO15054 1643 aa30.64■■■□□ 2.5
VPS9D1-AS1-202ENST00000562866 TRIM52Q96A61 297 aa30.63■■■□□ 2.49
VPS9D1-AS1-202ENST00000562866 ABCC10Q5T3U5 1492 aa30.6■■■□□ 2.49
VPS9D1-AS1-202ENST00000562866 ADGBQ8N7X0 1667 aa30.59■■■□□ 2.49
VPS9D1-AS1-202ENST00000562866 CROCC2H7BZ55 1655 aa30.56■■■□□ 2.48
VPS9D1-AS1-202ENST00000562866 CDC42BPAQ5VT25 1732 aa30.55■■■□□ 2.48
VPS9D1-AS1-202ENST00000562866 ADGRL2O95490 1459 aa30.55■■■□□ 2.48
VPS9D1-AS1-202ENST00000562866 MPHOSPH9Q99550 1183 aa30.54■■■□□ 2.48
VPS9D1-AS1-202ENST00000562866 DENND4BO75064 1496 aaPredicted RBP30.53■■■□□ 2.48
VPS9D1-AS1-202ENST00000562866 ZNF777Q9ULD5 760 aaPredicted RBP30.5■■■□□ 2.47
VPS9D1-AS1-202ENST00000562866 NCOA1Q15788 1441 aa30.5■■■□□ 2.47
VPS9D1-AS1-202ENST00000562866 SHANK2Q9UPX8 1470 aa30.47■■■□□ 2.47
VPS9D1-AS1-202ENST00000562866 ANKRD30AQ9BXX3 1397 aa30.47■■■□□ 2.47
VPS9D1-AS1-202ENST00000562866 CLASP1Q7Z460 1538 aa30.45■■■□□ 2.47
VPS9D1-AS1-202ENST00000562866 SCAF1Q9H7N4 1312 aaKnown RBP30.44■■■□□ 2.46
VPS9D1-AS1-202ENST00000562866 ABCC2Q92887 1545 aa30.44■■■□□ 2.46
VPS9D1-AS1-202ENST00000562866 KDM5BQ9UGL1 1544 aa30.41■■■□□ 2.46
VPS9D1-AS1-202ENST00000562866 ARHGEF5Q12774 1597 aa30.39■■■□□ 2.46
VPS9D1-AS1-202ENST00000562866 ERCC6L2Q5T890 1561 aa30.38■■■□□ 2.45
VPS9D1-AS1-202ENST00000562866 PREX2Q70Z35 1606 aa30.37■■■□□ 2.45
VPS9D1-AS1-202ENST00000562866 YTHDC1Q96MU7 727 aaKnown RBP30.36■■■□□ 2.45
VPS9D1-AS1-202ENST00000562866 ANKRD30BQ9BXX2 1392 aa30.36■■■□□ 2.45
VPS9D1-AS1-202ENST00000562866 C9orf84Q5VXU9 1444 aa30.35■■■□□ 2.45
VPS9D1-AS1-202ENST00000562866 SLC4A1APQ9BWU0 796 aaKnown RBP30.34■■■□□ 2.45
VPS9D1-AS1-202ENST00000562866 TSPY4P0CV99 314 aa30.32■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 TSPY10P0CW01 314 aa30.32■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 PZPP20742 1482 aa30.31■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 UHRF1BP1LA0JNW5 1464 aa30.31■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 RPRD2Q5VT52 1461 aaKnown RBP30.31■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 RSPH4AQ5TD94 716 aa30.31■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 ANKRD50Q9ULJ7 1429 aa30.3■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 CDC42BPBQ9Y5S2 1711 aa30.29■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 SAMD9LQ8IVG5 1584 aa30.27■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 MBD5Q9P267 1494 aa30.27■■■□□ 2.44
VPS9D1-AS1-202ENST00000562866 CCDC141Q6ZP82 1450 aa30.26■■■□□ 2.43
VPS9D1-AS1-202ENST00000562866 FOXD1Q16676 465 aa30.24■■■□□ 2.43
VPS9D1-AS1-202ENST00000562866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.24■■■□□ 2.438e-6■□□□□ 10.5
VPS9D1-AS1-202ENST00000562866 TTC37Q6PGP7 1564 aa30.22■■■□□ 2.43
VPS9D1-AS1-202ENST00000562866 KIAA1107Q9UPP5 1409 aa30.22■■■□□ 2.43
VPS9D1-AS1-202ENST00000562866 DDX10Q13206 875 aaKnown RBP30.22■■■□□ 2.43
VPS9D1-AS1-202ENST00000562866 HNRNPMP52272 730 aaKnown RBP eCLIP30.2■■■□□ 2.43
VPS9D1-AS1-202ENST00000562866 ARHGAP5Q13017 1502 aa30.2■■■□□ 2.43
VPS9D1-AS1-202ENST00000562866 PLEKHH2Q8IVE3 1493 aa30.2■■■□□ 2.43
VPS9D1-AS1-202ENST00000562866 L3MBTL2Q969R5 705 aa30.2■■■□□ 2.42
VPS9D1-AS1-202ENST00000562866 MYO5CQ9NQX4 1742 aa30.19■■■□□ 2.42
VPS9D1-AS1-202ENST00000562866 ZCCHC11Q5TAX3 1644 aaKnown RBP30.19■■■□□ 2.42
VPS9D1-AS1-202ENST00000562866 KDM5DQ9BY66 1539 aa30.18■■■□□ 2.42
VPS9D1-AS1-202ENST00000562866 KIF15Q9NS87 1388 aa30.17■■■□□ 2.42
VPS9D1-AS1-202ENST00000562866 TEX14Q8IWB6 1497 aa30.17■■■□□ 2.42
VPS9D1-AS1-202ENST00000562866 MAST1Q9Y2H9 1570 aa30.16■■■□□ 2.42
VPS9D1-AS1-202ENST00000562866 HIRIP3Q9BW71 556 aaPredicted RBP30.14■■■□□ 2.42
VPS9D1-AS1-202ENST00000562866 SYCP2Q9BX26 1530 aa30.12■■■□□ 2.41
VPS9D1-AS1-202ENST00000562866 GTF3C3Q9Y5Q9 886 aa30.11■■■□□ 2.41
VPS9D1-AS1-202ENST00000562866 NUP155O75694 1391 aa30.11■■■□□ 2.41
VPS9D1-AS1-202ENST00000562866 PKD2Q13563 968 aa30.1■■■□□ 2.41
VPS9D1-AS1-202ENST00000562866 EIF4G2P78344 907 aaKnown RBP eCLIP30.08■■■□□ 2.41
VPS9D1-AS1-202ENST00000562866 PLCH2O75038 1416 aa30.07■■■□□ 2.4
VPS9D1-AS1-202ENST00000562866 HSPA5P11021 654 aaKnown RBP30.04■■■□□ 2.4
VPS9D1-AS1-202ENST00000562866 KCNH8Q96L42 1107 aa30.04■■■□□ 2.4
VPS9D1-AS1-202ENST00000562866 PLXNC1O60486 1568 aa30.03■■■□□ 2.4
VPS9D1-AS1-202ENST00000562866 ANP32CO43423 234 aa30.01■■■□□ 2.39
VPS9D1-AS1-202ENST00000562866 EFCAB2Q5VUJ9 269 aa30■■■□□ 2.39
VPS9D1-AS1-202ENST00000562866 ARAP3Q8WWN8 1544 aa29.99■■■□□ 2.39
VPS9D1-AS1-202ENST00000562866 CCER2I3L3R5 266 aa29.98■■■□□ 2.39
VPS9D1-AS1-202ENST00000562866 NBPF8Q3BBV2 869 aa29.96■■■□□ 2.39
VPS9D1-AS1-202ENST00000562866 UNC13BO14795 1591 aa29.95■■■□□ 2.38
VPS9D1-AS1-202ENST00000562866 ABCC1P33527 1531 aa29.93■■■□□ 2.38
VPS9D1-AS1-202ENST00000562866 FAM135AQ9P2D6 1515 aa29.93■■■□□ 2.38
VPS9D1-AS1-202ENST00000562866 DUOX2Q9NRD8 1548 aa29.92■■■□□ 2.38
VPS9D1-AS1-202ENST00000562866 ARHGEF12Q9NZN5 1544 aa29.91■■■□□ 2.38
VPS9D1-AS1-202ENST00000562866 WDR7Q9Y4E6 1490 aa29.9■■■□□ 2.38
VPS9D1-AS1-202ENST00000562866 WASHC2AQ641Q2 1341 aa29.88■■■□□ 2.37
VPS9D1-AS1-202ENST00000562866 ERBINQ96RT1 1412 aa29.87■■■□□ 2.37
VPS9D1-AS1-202ENST00000562866 UHRF1BP1Q6BDS2 1440 aa29.85■■■□□ 2.37
VPS9D1-AS1-202ENST00000562866 SPATA31E1Q6ZUB1 1445 aa29.84■■■□□ 2.37
VPS9D1-AS1-202ENST00000562866 IQGAP3Q86VI3 1631 aa29.82■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 CCDC7Q96M83 1385 aa29.8■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 RTEL1-TNFRSF6BF6WH68 1400 aa29.8■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 ABCA9Q8IUA7 1624 aa29.79■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 MAGI2Q86UL8 1455 aa29.79■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 CNTLNQ9NXG0 1405 aa29.78■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 TRAPPC8Q9Y2L5 1435 aa29.78■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 POLR1AO95602 1720 aaPredicted RBP29.77■■■□□ 2.36
VPS9D1-AS1-202ENST00000562866 RALGAPBQ86X10 1494 aa29.75■■■□□ 2.35
VPS9D1-AS1-202ENST00000562866 CCDC144AA2RUR9 1427 aa29.73■■■□□ 2.35
VPS9D1-AS1-202ENST00000562866 SPAG9O60271 1321 aaKnown RBP29.73■■■□□ 2.35
VPS9D1-AS1-202ENST00000562866 ASXL2Q76L83 1435 aa29.71■■■□□ 2.35
VPS9D1-AS1-202ENST00000562866 FANCAO15360 1455 aa29.7■■■□□ 2.35
VPS9D1-AS1-202ENST00000562866 ZNF326Q5BKZ1 582 aaKnown RBP29.7■■■□□ 2.35
VPS9D1-AS1-202ENST00000562866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.7■■■□□ 2.35
VPS9D1-AS1-202ENST00000562866 USP47Q96K76 1375 aa29.69■■■□□ 2.34
VPS9D1-AS1-202ENST00000562866 ZFYVE16Q7Z3T8 1539 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms